RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 HHEXQ03014 270 aa7.28□□□□□ -1.24
SPTLC1-205ENST00000477888 ZNF630Q2M218 657 aaPredicted RBP7.28□□□□□ -1.24
SPTLC1-205ENST00000477888 DCAF17Q5H9S7 520 aaPredicted RBP7.28□□□□□ -1.24
SPTLC1-205ENST00000477888 RESP18Q5W5W9 173 aa7.28□□□□□ -1.24
SPTLC1-205ENST00000477888 FAM199XQ6PEV8 388 aaPredicted RBP7.28□□□□□ -1.24
SPTLC1-205ENST00000477888 BRAT1Q6PJG6 821 aa7.28□□□□□ -1.24
SPTLC1-205ENST00000477888 IGFL3Q6UXB1 125 aa7.28□□□□□ -1.24
SPTLC1-205ENST00000477888 ZNF517Q6ZMY9 492 aaPredicted RBP7.28□□□□□ -1.24
SPTLC1-205ENST00000477888 C11orf57Q6ZUT1 292 aaPredicted RBP7.28□□□□□ -1.24
SPTLC1-205ENST00000477888 FAM183BPQ6ZVS7 135 aa7.28□□□□□ -1.24
SPTLC1-205ENST00000477888 RRAGAQ7L523 313 aa7.28□□□□□ -1.24
SPTLC1-205ENST00000477888 SLC26A9Q7LBE3 791 aa7.28□□□□□ -1.24
SPTLC1-205ENST00000477888 KCNMB4Q86W47 210 aa7.28□□□□□ -1.24
SPTLC1-205ENST00000477888 PLXDC1Q8IUK5 500 aa7.28□□□□□ -1.24
SPTLC1-205ENST00000477888 RASGRP3Q8IV61 690 aa7.28□□□□□ -1.24
SPTLC1-205ENST00000477888 CEP57L1Q8IYX8 460 aa7.28□□□□□ -1.24
SPTLC1-205ENST00000477888 CBARPQ8N350 705 aaPredicted RBP7.28□□□□□ -1.24
SPTLC1-205ENST00000477888 HDAC11Q96DB2 347 aa7.28□□□□□ -1.24
SPTLC1-205ENST00000477888 ELMO2Q96JJ3 720 aa7.28□□□□□ -1.24
SPTLC1-205ENST00000477888 C9orf72Q96LT7 481 aa7.28□□□□□ -1.24
SPTLC1-205ENST00000477888 KREMEN1Q96MU8 473 aa7.28□□□□□ -1.24
SPTLC1-205ENST00000477888 ZNF641Q96N77 438 aaPredicted RBP7.28□□□□□ -1.24
SPTLC1-205ENST00000477888 NT5C1BQ96P26 610 aa7.28□□□□□ -1.24
SPTLC1-205ENST00000477888 MAGEH1Q9H213 219 aa7.28□□□□□ -1.24
SPTLC1-205ENST00000477888 CHST11Q9NPF2 352 aa7.28□□□□□ -1.24
SPTLC1-205ENST00000477888 ACP6Q9NPH0 428 aa7.28□□□□□ -1.24
SPTLC1-205ENST00000477888 GPR83Q9NYM4 423 aa7.28□□□□□ -1.24
SPTLC1-205ENST00000477888 C5AR2Q9P296 337 aa7.28□□□□□ -1.24
SPTLC1-205ENST00000477888 USP25Q9UHP3 1055 aa7.28□□□□□ -1.24
SPTLC1-205ENST00000477888 LNPEPQ9UIQ6 1025 aa7.28□□□□□ -1.24
SPTLC1-205ENST00000477888 HPCAL4Q9UM19 191 aa7.28□□□□□ -1.24
SPTLC1-205ENST00000477888 LRP4O75096 1905 aa7.28□□□□□ -1.24
SPTLC1-205ENST00000477888 A0A1B0GUH1 482 aa7.27□□□□□ -1.25
SPTLC1-205ENST00000477888 RASA4BC9J798 803 aa7.27□□□□□ -1.25
SPTLC1-205ENST00000477888 E2F3O00716 465 aa7.27□□□□□ -1.25
SPTLC1-205ENST00000477888 TOX3O15405 576 aaPredicted RBP7.27□□□□□ -1.25
SPTLC1-205ENST00000477888 RASA4O43374 803 aa7.27□□□□□ -1.25
SPTLC1-205ENST00000477888 MED7O43513 233 aa7.27□□□□□ -1.25
SPTLC1-205ENST00000477888 BUB1O43683 1085 aa7.27□□□□□ -1.25
SPTLC1-205ENST00000477888 TMEM63AO94886 807 aa7.27□□□□□ -1.25
SPTLC1-205ENST00000477888 LETM1O95202 739 aaPredicted RBP7.27□□□□□ -1.25
SPTLC1-205ENST00000477888 TIAF1O95411 115 aa7.27□□□□□ -1.25
SPTLC1-205ENST00000477888 YEATS4O95619 227 aa7.27□□□□□ -1.25
SPTLC1-205ENST00000477888 MYL1P05976 194 aa7.27□□□□□ -1.25
SPTLC1-205ENST00000477888 PLEKP08567 350 aaPredicted RBP7.27□□□□□ -1.25
SPTLC1-205ENST00000477888 COX6B1P14854 86 aa7.27□□□□□ -1.25
SPTLC1-205ENST00000477888 MAPKAPK2P49137 400 aa7.27□□□□□ -1.25
SPTLC1-205ENST00000477888 FMO5P49326 533 aa7.27□□□□□ -1.25
SPTLC1-205ENST00000477888 EPHA4P54764 986 aa7.27□□□□□ -1.25
SPTLC1-205ENST00000477888 GFERP55789 205 aa7.27□□□□□ -1.25
SPTLC1-205ENST00000477888 RHOAP61586 193 aa7.27□□□□□ -1.25
SPTLC1-205ENST00000477888 RPS15P62841 145 aaKnown RBP7.27□□□□□ -1.25
SPTLC1-205ENST00000477888 CDK3Q00526 305 aa7.27□□□□□ -1.25
SPTLC1-205ENST00000477888 DEUP1Q05D60 604 aa7.27□□□□□ -1.25
SPTLC1-205ENST00000477888 NFATC2Q13469 925 aa7.27□□□□□ -1.25
SPTLC1-205ENST00000477888 ZNF235Q14590 738 aa7.27□□□□□ -1.25
SPTLC1-205ENST00000477888 CYTH1Q15438 398 aa7.27□□□□□ -1.25
SPTLC1-205ENST00000477888 QPCTQ16769 361 aa7.27□□□□□ -1.25
SPTLC1-205ENST00000477888 SMTNL2Q2TAL5 461 aa7.27□□□□□ -1.25
SPTLC1-205ENST00000477888 MANEALQ5VSG8 457 aa7.27□□□□□ -1.25
SPTLC1-205ENST00000477888 IYDQ6PHW0 289 aa7.27□□□□□ -1.25
SPTLC1-205ENST00000477888 BNIPLQ7Z465 357 aa7.27□□□□□ -1.25
SPTLC1-205ENST00000477888 FJX1Q86VR8 437 aa7.27□□□□□ -1.25
SPTLC1-205ENST00000477888 PPP1R3BQ86XI6 285 aa7.27□□□□□ -1.25
SPTLC1-205ENST00000477888 CAMK1DQ8IU85 385 aa7.27□□□□□ -1.25
SPTLC1-205ENST00000477888 ARHGEF19Q8IW93 802 aa7.27□□□□□ -1.25
SPTLC1-205ENST00000477888 ITLN2Q8WWU7 325 aaPredicted RBP7.27□□□□□ -1.25
SPTLC1-205ENST00000477888 CASKIN2Q8WXE0 1202 aa7.27□□□□□ -1.25
SPTLC1-205ENST00000477888 RELTQ969Z4 430 aa7.27□□□□□ -1.25
SPTLC1-205ENST00000477888 SH3KBP1Q96B97 665 aa7.27□□□□□ -1.25
SPTLC1-205ENST00000477888 INTS4Q96HW7 963 aaKnown RBP7.27□□□□□ -1.25
SPTLC1-205ENST00000477888 COQ10AQ96MF6 247 aa7.27□□□□□ -1.25
SPTLC1-205ENST00000477888 TBCBQ99426 244 aa7.27□□□□□ -1.25
SPTLC1-205ENST00000477888 EPB41L1Q9H4G0 881 aa7.27□□□□□ -1.25
SPTLC1-205ENST00000477888 RETREG1Q9H6L5 497 aa7.27□□□□□ -1.25
SPTLC1-205ENST00000477888 PHPT1Q9NRX4 125 aaPredicted RBP7.27□□□□□ -1.25
SPTLC1-205ENST00000477888 AGPAT4Q9NRZ5 378 aa7.27□□□□□ -1.25
SPTLC1-205ENST00000477888 TMEM51Q9NW97 253 aa7.27□□□□□ -1.25
SPTLC1-205ENST00000477888 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.27□□□□□ -1.25
SPTLC1-205ENST00000477888 LHX3Q9UBR4 397 aa7.27□□□□□ -1.25
SPTLC1-205ENST00000477888 DNAI1Q9UI46 699 aa7.27□□□□□ -1.25
SPTLC1-205ENST00000477888 PCDHA7Q9UN72 937 aa7.27□□□□□ -1.25
SPTLC1-205ENST00000477888 G3BP2Q9UN86 482 aaKnown RBP7.27□□□□□ -1.25
SPTLC1-205ENST00000477888 MTMR6Q9Y217 621 aa7.27□□□□□ -1.25
SPTLC1-205ENST00000477888 FARSAQ9Y285 508 aaKnown RBP7.27□□□□□ -1.25
SPTLC1-205ENST00000477888 ARHGEF17Q96PE2 2063 aaPredicted RBP7.27□□□□□ -1.25
SPTLC1-205ENST00000477888 DIDO1Q9BTC0 2240 aaKnown RBP7.26□□□□□ -1.25
SPTLC1-205ENST00000477888 F5H423 210 aaPredicted RBP7.26□□□□□ -1.25
SPTLC1-205ENST00000477888 SLC16A3O15427 465 aaKnown RBP7.26□□□□□ -1.25
SPTLC1-205ENST00000477888 RAMP2O60895 175 aa7.26□□□□□ -1.25
SPTLC1-205ENST00000477888 NADKO95544 446 aaPredicted RBP7.26□□□□□ -1.25
SPTLC1-205ENST00000477888 ERBB2P04626 1255 aa7.26□□□□□ -1.25
SPTLC1-205ENST00000477888 ELFN1P0C7U0 828 aa7.26□□□□□ -1.25
SPTLC1-205ENST00000477888 CD46P15529 392 aa7.26□□□□□ -1.25
SPTLC1-205ENST00000477888 CD1EP15812 388 aa7.26□□□□□ -1.25
SPTLC1-205ENST00000477888 RHOQP17081 205 aa7.26□□□□□ -1.25
SPTLC1-205ENST00000477888 HTR1EP28566 365 aa7.26□□□□□ -1.25
SPTLC1-205ENST00000477888 SSTR2P30874 369 aa7.26□□□□□ -1.25
SPTLC1-205ENST00000477888 MAPK9P45984 424 aa7.26□□□□□ -1.25
SPTLC1-205ENST00000477888 GLRBP48167 497 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms