RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 C5orf60A6NFR6 353 aa12.4□□□□□ -0.42
APTX-220ENST00000476858 ZNF185O15231 689 aa12.4□□□□□ -0.42
APTX-220ENST00000476858 INPP4BO15327 924 aa12.4□□□□□ -0.42
APTX-220ENST00000476858 FLRT2O43155 660 aa12.4□□□□□ -0.42
APTX-220ENST00000476858 MTSS1O43312 755 aa12.4□□□□□ -0.42
APTX-220ENST00000476858 SIGLEC6O43699 453 aa12.4□□□□□ -0.42
APTX-220ENST00000476858 FGGP02679 453 aa12.4□□□□□ -0.42
APTX-220ENST00000476858 GOLGA6DP0CG33 693 aa12.4□□□□□ -0.42
APTX-220ENST00000476858 CEACAM1P13688 526 aa12.4□□□□□ -0.42
APTX-220ENST00000476858 JUNDP17535 347 aa12.4□□□□□ -0.42
APTX-220ENST00000476858 SDHBP21912 280 aa12.4□□□□□ -0.42
APTX-220ENST00000476858 CETN2P41208 172 aa12.4□□□□□ -0.42
APTX-220ENST00000476858 SPINT3P49223 89 aa12.4□□□□□ -0.42
APTX-220ENST00000476858 THOP1P52888 689 aa12.4□□□□□ -0.42
APTX-220ENST00000476858 RPL26P61254 145 aaKnown RBP12.4□□□□□ -0.42
APTX-220ENST00000476858 TRIP6Q15654 476 aaKnown RBP12.4□□□□□ -0.42
APTX-220ENST00000476858 SLC1A5Q15758 541 aa12.4□□□□□ -0.42
APTX-220ENST00000476858 SLC14A2Q15849 920 aa12.4□□□□□ -0.42
APTX-220ENST00000476858 DEFB133Q30KQ1 61 aa12.4□□□□□ -0.42
APTX-220ENST00000476858 DOK6Q6PKX4 331 aa12.4□□□□□ -0.42
APTX-220ENST00000476858 TMC3Q7Z5M5 1100 aa12.4□□□□□ -0.42
APTX-220ENST00000476858 ZSCAN30Q86W11 494 aa12.4□□□□□ -0.42
APTX-220ENST00000476858 HID1Q8IV36 788 aa12.4□□□□□ -0.42
APTX-220ENST00000476858 KLHDC8BQ8IXV7 354 aa12.4□□□□□ -0.42
APTX-220ENST00000476858 LMX1AQ8TE12 382 aa12.4□□□□□ -0.42
APTX-220ENST00000476858 SKA1Q96BD8 255 aa12.4□□□□□ -0.42
APTX-220ENST00000476858 AP2M1Q96CW1 435 aa12.4□□□□□ -0.42
APTX-220ENST00000476858 IFT43Q96FT9 208 aa12.4□□□□□ -0.42
APTX-220ENST00000476858 GOLGA6AQ9NYA3 693 aa12.4□□□□□ -0.42
APTX-220ENST00000476858 TRHDEQ9UKU6 1024 aa12.4□□□□□ -0.42
APTX-220ENST00000476858 RPL26L1Q9UNX3 145 aaKnown RBP12.4□□□□□ -0.42
APTX-220ENST00000476858 WASF3Q9UPY6 502 aa12.4□□□□□ -0.42
APTX-220ENST00000476858 AKAP13Q12802 2813 aa12.39□□□□□ -0.43
APTX-220ENST00000476858 PSMD11O00231 422 aa12.39□□□□□ -0.43
APTX-220ENST00000476858 GAPDHSO14556 408 aaPredicted RBP12.39□□□□□ -0.43
APTX-220ENST00000476858 CEACAM5P06731 702 aa12.39□□□□□ -0.43
APTX-220ENST00000476858 FTH1P19P0C7X4 201 aa12.39□□□□□ -0.43
APTX-220ENST00000476858 TSHRP16473 764 aa12.39□□□□□ -0.43
APTX-220ENST00000476858 BPIP17213 487 aa12.39□□□□□ -0.43
APTX-220ENST00000476858 GRIA1P42261 906 aa12.39□□□□□ -0.43
APTX-220ENST00000476858 GRK6P43250 576 aa12.39□□□□□ -0.43
APTX-220ENST00000476858 ARRB1P49407 418 aaPredicted RBP12.39□□□□□ -0.43
APTX-220ENST00000476858 SRP54P61011 504 aaKnown RBP12.39□□□□□ -0.43
APTX-220ENST00000476858 YPEL5P62699 121 aa12.39□□□□□ -0.43
APTX-220ENST00000476858 CDK3Q00526 305 aa12.39□□□□□ -0.43
APTX-220ENST00000476858 PROX2Q3B8N5 592 aa12.39□□□□□ -0.43
APTX-220ENST00000476858 KHDC1Q4VXA5 237 aaKnown RBP12.39□□□□□ -0.43
APTX-220ENST00000476858 CCDC157Q569K6 752 aa12.39□□□□□ -0.43
APTX-220ENST00000476858 PRRT3Q5FWE3 981 aa12.39□□□□□ -0.43
APTX-220ENST00000476858 KCTD11Q693B1 232 aa12.39□□□□□ -0.43
APTX-220ENST00000476858 RAET1GQ6H3X3 334 aa12.39□□□□□ -0.43
APTX-220ENST00000476858 TTC27Q6P3X3 843 aa12.39□□□□□ -0.43
APTX-220ENST00000476858 RANBP10Q6VN20 620 aa12.39□□□□□ -0.43
APTX-220ENST00000476858 PRELID2Q8N945 189 aa12.39□□□□□ -0.43
APTX-220ENST00000476858 NAT14Q8WUY8 206 aa12.39□□□□□ -0.43
APTX-220ENST00000476858 CCDC97Q96F63 343 aaPredicted RBP12.39□□□□□ -0.43
APTX-220ENST00000476858 WDR92Q96MX6 357 aa12.39□□□□□ -0.43
APTX-220ENST00000476858 VAT1Q99536 393 aa12.39□□□□□ -0.43
APTX-220ENST00000476858 C1QTNF7Q9BXJ2 289 aa12.39□□□□□ -0.43
APTX-220ENST00000476858 TEX101Q9BY14 249 aa12.39□□□□□ -0.43
APTX-220ENST00000476858 ADGRE3Q9BY15 652 aa12.39□□□□□ -0.43
APTX-220ENST00000476858 FRMD8Q9BZ67 464 aaPredicted RBP12.39□□□□□ -0.43
APTX-220ENST00000476858 WDR26Q9H7D7 661 aa12.39□□□□□ -0.43
APTX-220ENST00000476858 APOBEC3BQ9UH17 382 aaKnown RBP12.39□□□□□ -0.43
APTX-220ENST00000476858 PRKAB1Q9Y478 270 aa12.39□□□□□ -0.43
APTX-220ENST00000476858 ARID1BQ8NFD5 2236 aaPredicted RBP12.39□□□□□ -0.43
APTX-220ENST00000476858 PCNX2A6NKB5 2137 aa12.38□□□□□ -0.43
APTX-220ENST00000476858 GOLGA6L9A6NEM1 432 aa12.38□□□□□ -0.43
APTX-220ENST00000476858 CCL22O00626 93 aa12.38□□□□□ -0.43
APTX-220ENST00000476858 HYAL3O43820 417 aaPredicted RBP12.38□□□□□ -0.43
APTX-220ENST00000476858 DFNA5O60443 496 aa12.38□□□□□ -0.43
APTX-220ENST00000476858 MAGEC1O60732 1142 aa12.38□□□□□ -0.43
APTX-220ENST00000476858 ADRB1P08588 477 aa12.38□□□□□ -0.43
APTX-220ENST00000476858 ZNF30P17039 623 aa12.38□□□□□ -0.43
APTX-220ENST00000476858 TPH1P17752 444 aa12.38□□□□□ -0.43
APTX-220ENST00000476858 CA4P22748 312 aa12.38□□□□□ -0.43
APTX-220ENST00000476858 HK3P52790 923 aa12.38□□□□□ -0.43
APTX-220ENST00000476858 KIAA1024LP59773 190 aa12.38□□□□□ -0.43
APTX-220ENST00000476858 DPTQ07507 201 aa12.38□□□□□ -0.43
APTX-220ENST00000476858 FOXC1Q12948 553 aa12.38□□□□□ -0.43
APTX-220ENST00000476858 MPP3Q13368 585 aa12.38□□□□□ -0.43
APTX-220ENST00000476858 HENMT1Q5T8I9 393 aaKnown RBP12.38□□□□□ -0.43
APTX-220ENST00000476858 MARK2Q7KZI7 788 aaKnown RBP12.38□□□□□ -0.43
APTX-220ENST00000476858 NRROSQ86YC3 692 aa12.38□□□□□ -0.43
APTX-220ENST00000476858 DCP2Q8IU60 420 aaKnown RBP12.38□□□□□ -0.43
APTX-220ENST00000476858 CHCHD4Q8N4Q1 142 aa12.38□□□□□ -0.43
APTX-220ENST00000476858 TTC13Q8NBP0 860 aa12.38□□□□□ -0.43
APTX-220ENST00000476858 BLOC1S5Q8TDH9 187 aa12.38□□□□□ -0.43
APTX-220ENST00000476858 RTP4Q96DX8 246 aa12.38□□□□□ -0.43
APTX-220ENST00000476858 CNDP2Q96KP4 475 aaKnown RBP12.38□□□□□ -0.43
APTX-220ENST00000476858 AP1M1Q9BXS5 423 aa12.38□□□□□ -0.43
APTX-220ENST00000476858 TMEM168Q9H0V1 697 aa12.38□□□□□ -0.43
APTX-220ENST00000476858 SLC32A1Q9H598 525 aa12.38□□□□□ -0.43
APTX-220ENST00000476858 ZFYVE1Q9HBF4 777 aa12.38□□□□□ -0.43
APTX-220ENST00000476858 MAGEE1Q9HCI5 957 aa12.38□□□□□ -0.43
APTX-220ENST00000476858 CYP4F12Q9HCS2 524 aa12.38□□□□□ -0.43
APTX-220ENST00000476858 KLQ9UEF7 1012 aa12.38□□□□□ -0.43
APTX-220ENST00000476858 ARL5AQ9Y689 179 aa12.38□□□□□ -0.43
APTX-220ENST00000476858 COL5A1P20908 1838 aaPredicted RBP12.37□□□□□ -0.43
APTX-220ENST00000476858 YY2O15391 372 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms