RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 PIANPQ8IYJ0 282 aa28.77■■■□□ 2.2
VEGFA-211ENST00000476772 GPATCH11Q8N954 259 aa28.77■■■□□ 2.2
VEGFA-211ENST00000476772 DENND1AQ8TEH3 1009 aa28.77■■■□□ 2.2
VEGFA-211ENST00000476772 GPR39O43194 453 aa28.76■■■□□ 2.19
VEGFA-211ENST00000476772 SAT1P21673 171 aa28.76■■■□□ 2.19
VEGFA-211ENST00000476772 GNGT1P63211 74 aa28.76■■■□□ 2.19
VEGFA-211ENST00000476772 ARHGEF7Q14155 803 aa28.76■■■□□ 2.19
VEGFA-211ENST00000476772 USP10Q14694 798 aaKnown RBP28.76■■■□□ 2.19
VEGFA-211ENST00000476772 RBM20Q5T481 1227 aaKnown RBP28.76■■■□□ 2.19
VEGFA-211ENST00000476772 CDHR3Q6ZTQ4 885 aa28.76■■■□□ 2.19
VEGFA-211ENST00000476772 TCP10LQ8TDR4 215 aa28.76■■■□□ 2.19
VEGFA-211ENST00000476772 ATXN2LQ8WWM7 1075 aaKnown RBP28.76■■■□□ 2.19
VEGFA-211ENST00000476772 ELMO2Q96JJ3 720 aa28.76■■■□□ 2.19
VEGFA-211ENST00000476772 C12orf65Q9H3J6 166 aaKnown RBP28.76■■■□□ 2.19
VEGFA-211ENST00000476772 IL26Q9NPH9 171 aa28.76■■■□□ 2.19
VEGFA-211ENST00000476772 MKS1Q9NXB0 559 aa28.76■■■□□ 2.19
VEGFA-211ENST00000476772 SLC30A1Q9Y6M5 507 aa28.76■■■□□ 2.19
VEGFA-211ENST00000476772 CKAP5Q14008 2032 aa28.76■■■□□ 2.19
VEGFA-211ENST00000476772 ZNF30P17039 623 aa28.75■■■□□ 2.19
VEGFA-211ENST00000476772 SPAM1P38567 509 aa28.75■■■□□ 2.19
VEGFA-211ENST00000476772 PSMD8P48556 350 aa28.75■■■□□ 2.19
VEGFA-211ENST00000476772 CLCN5P51795 746 aa28.75■■■□□ 2.19
VEGFA-211ENST00000476772 C2orf27AQ580R0 203 aa28.75■■■□□ 2.19
VEGFA-211ENST00000476772 PPM1JQ5JR12 505 aa28.75■■■□□ 2.19
VEGFA-211ENST00000476772 CBARPQ8N350 705 aaPredicted RBP28.75■■■□□ 2.19
VEGFA-211ENST00000476772 NDNQ99608 321 aa28.75■■■□□ 2.19
VEGFA-211ENST00000476772 CRYL1Q9Y2S2 319 aa28.75■■■□□ 2.19
VEGFA-211ENST00000476772 C1QTNF3-AMACRE9PGA6 284 aa28.74■■■□□ 2.19
VEGFA-211ENST00000476772 SRP72O76094 671 aaKnown RBP28.74■■■□□ 2.19
VEGFA-211ENST00000476772 ZWINTO95229 277 aa28.74■■■□□ 2.19
VEGFA-211ENST00000476772 PRAMEF1O95521 474 aa28.74■■■□□ 2.19
VEGFA-211ENST00000476772 TOP3BO95985 862 aaKnown RBP28.74■■■□□ 2.19
VEGFA-211ENST00000476772 PFKPQ01813 784 aa28.74■■■□□ 2.19
VEGFA-211ENST00000476772 TFF2Q03403 129 aa28.74■■■□□ 2.19
VEGFA-211ENST00000476772 CACNG1Q06432 222 aa28.74■■■□□ 2.19
VEGFA-211ENST00000476772 GRSF1Q12849 480 aaKnown RBP eCLIP28.74■■■□□ 2.19
VEGFA-211ENST00000476772 RALGDSQ12967 914 aa28.74■■■□□ 2.19
VEGFA-211ENST00000476772 RFLNAQ6ZTI6 216 aa28.74■■■□□ 2.19
VEGFA-211ENST00000476772 DPPA4Q7L190 304 aa28.74■■■□□ 2.19
VEGFA-211ENST00000476772 GPR26Q8NDV2 337 aa28.74■■■□□ 2.19
VEGFA-211ENST00000476772 PPP1R16AQ96I34 528 aa28.74■■■□□ 2.19
VEGFA-211ENST00000476772 INTS10Q9NVR2 710 aaKnown RBP28.74■■■□□ 2.19
VEGFA-211ENST00000476772 SLC17A7Q9P2U7 560 aa28.74■■■□□ 2.19
VEGFA-211ENST00000476772 APPL1Q9UKG1 709 aa28.74■■■□□ 2.19
VEGFA-211ENST00000476772 GLYATL1P3A0A0U1RQE8 302 aa28.74■■■□□ 2.19
VEGFA-211ENST00000476772 GOLGA8CPA6NN73 597 aa28.74■■■□□ 2.19
VEGFA-211ENST00000476772 PLK4O00444 970 aa28.74■■■□□ 2.19
VEGFA-211ENST00000476772 DRD1P21728 446 aa28.74■■■□□ 2.19
VEGFA-211ENST00000476772 GMPRP36959 345 aa28.74■■■□□ 2.19
VEGFA-211ENST00000476772 MMP12P39900 470 aa28.74■■■□□ 2.19
VEGFA-211ENST00000476772 PGGT1BP53609 377 aa28.74■■■□□ 2.19
VEGFA-211ENST00000476772 WDR4P57081 412 aaKnown RBP28.74■■■□□ 2.19
VEGFA-211ENST00000476772 CAMK2GQ13555 558 aaPredicted RBP28.74■■■□□ 2.19
VEGFA-211ENST00000476772 ERAP2Q6P179 960 aa28.74■■■□□ 2.19
VEGFA-211ENST00000476772 SCG3Q8WXD2 468 aaKnown RBP28.74■■■□□ 2.19
VEGFA-211ENST00000476772 TCF12Q99081 682 aa28.74■■■□□ 2.19
VEGFA-211ENST00000476772 OMDQ99983 421 aa28.74■■■□□ 2.19
VEGFA-211ENST00000476772 VPS11Q9H270 941 aa28.74■■■□□ 2.19
VEGFA-211ENST00000476772 ITM2BQ9Y287 266 aa28.74■■■□□ 2.19
VEGFA-211ENST00000476772 ATG2BQ96BY7 2078 aa28.73■■■□□ 2.19
VEGFA-211ENST00000476772 F5P12259 2224 aa28.73■■■□□ 2.19
VEGFA-211ENST00000476772 TM9SF1O15321 606 aa28.73■■■□□ 2.19
VEGFA-211ENST00000476772 POLD2P49005 469 aa28.73■■■□□ 2.19
VEGFA-211ENST00000476772 CSRP3P50461 194 aa28.73■■■□□ 2.19
VEGFA-211ENST00000476772 TDGQ13569 410 aa28.73■■■□□ 2.19
VEGFA-211ENST00000476772 FBXL19Q6PCT2 694 aa28.73■■■□□ 2.19
VEGFA-211ENST00000476772 TAS2R42Q7RTR8 314 aa28.73■■■□□ 2.19
VEGFA-211ENST00000476772 CENPTQ96BT3 561 aa28.73■■■□□ 2.19
VEGFA-211ENST00000476772 IQCGQ9H095 443 aaKnown RBP28.73■■■□□ 2.19
VEGFA-211ENST00000476772 DYRK4Q9NR20 520 aa28.73■■■□□ 2.19
VEGFA-211ENST00000476772 A0A096LPK6 155 aa28.72■■■□□ 2.19
VEGFA-211ENST00000476772 SPINT1O43278 529 aa28.72■■■□□ 2.19
VEGFA-211ENST00000476772 SHOX2O60902 331 aaPredicted RBP28.72■■■□□ 2.19
VEGFA-211ENST00000476772 MPOP05164 745 aa28.72■■■□□ 2.19
VEGFA-211ENST00000476772 SRFP11831 508 aa28.72■■■□□ 2.19
VEGFA-211ENST00000476772 NTSR1P30989 418 aa28.72■■■□□ 2.19
VEGFA-211ENST00000476772 CRHR1P34998 444 aa28.72■■■□□ 2.19
VEGFA-211ENST00000476772 SPINT3P49223 89 aa28.72■■■□□ 2.19
VEGFA-211ENST00000476772 TAS2R39P59534 338 aa28.72■■■□□ 2.19
VEGFA-211ENST00000476772 AARS2Q5JTZ9 985 aaKnown RBP28.72■■■□□ 2.19
VEGFA-211ENST00000476772 HABP4Q5JVS0 413 aaKnown RBP28.72■■■□□ 2.19
VEGFA-211ENST00000476772 HSD11B1LQ7Z5J1 315 aa28.72■■■□□ 2.19
VEGFA-211ENST00000476772 CEP97Q8IW35 865 aa28.72■■■□□ 2.19
VEGFA-211ENST00000476772 GDAP1Q8TB36 358 aa28.72■■■□□ 2.19
VEGFA-211ENST00000476772 LPGAT1Q92604 370 aa28.72■■■□□ 2.19
VEGFA-211ENST00000476772 ASB8Q9H765 288 aa28.72■■■□□ 2.19
VEGFA-211ENST00000476772 PKD2L2Q9NZM6 624 aa28.72■■■□□ 2.19
VEGFA-211ENST00000476772 PHGDHO43175 533 aaKnown RBP28.71■■■□□ 2.19
VEGFA-211ENST00000476772 SYNCRIPO60506 623 aaKnown RBP28.71■■■□□ 2.19
VEGFA-211ENST00000476772 NDUFS3O75489 264 aa28.71■■■□□ 2.19
VEGFA-211ENST00000476772 C2P06681 752 aa28.71■■■□□ 2.19
VEGFA-211ENST00000476772 ADRB3P13945 408 aa28.71■■■□□ 2.19
VEGFA-211ENST00000476772 GLULP15104 373 aa28.71■■■□□ 2.19
VEGFA-211ENST00000476772 CCT5P48643 541 aa28.71■■■□□ 2.19
VEGFA-211ENST00000476772 TTPAP49638 278 aa28.71■■■□□ 2.19
VEGFA-211ENST00000476772 POU4F1Q01851 419 aa28.71■■■□□ 2.19
VEGFA-211ENST00000476772 CHRNA6Q15825 494 aa28.71■■■□□ 2.19
VEGFA-211ENST00000476772 HECTD2Q5U5R9 776 aa28.71■■■□□ 2.19
VEGFA-211ENST00000476772 ZNF549Q6P9A3 640 aa28.71■■■□□ 2.19
VEGFA-211ENST00000476772 LVRNQ6Q4G3 990 aa28.71■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms