RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 CCDC13Q8IYE1 715 aa15.12■□□□□ 0.01
VARS-223ENST00000474643 UBL4BQ8N7F7 174 aa15.12■□□□□ 0.01
VARS-223ENST00000474643 PLD5Q8N7P1 536 aa15.12■□□□□ 0.01
VARS-223ENST00000474643 EXD1Q8NHP7 514 aa15.12■□□□□ 0.01
VARS-223ENST00000474643 LRRN4Q8WUT4 740 aa15.12■□□□□ 0.01
VARS-223ENST00000474643 OR1E3Q8WZA6 343 aa15.12■□□□□ 0.01
VARS-223ENST00000474643 RBM15Q96T37 977 aaKnown RBP eCLIP15.12■□□□□ 0.01
VARS-223ENST00000474643 POLR1EQ9GZS1 481 aaKnown RBP15.12■□□□□ 0.01
VARS-223ENST00000474643 KCNF1Q9H3M0 494 aa15.12■□□□□ 0.01
VARS-223ENST00000474643 CARS2Q9HA77 564 aaKnown RBP15.12■□□□□ 0.01
VARS-223ENST00000474643 NOD2Q9HC29 1040 aa15.12■□□□□ 0.01
VARS-223ENST00000474643 MRPL40Q9NQ50 206 aaKnown RBP15.12■□□□□ 0.01
VARS-223ENST00000474643 KCND1Q9NSA2 647 aa15.12■□□□□ 0.01
VARS-223ENST00000474643 SEPT10Q9P0V9 454 aa15.12■□□□□ 0.01
VARS-223ENST00000474643 PCDHA3Q9Y5H8 950 aa15.12■□□□□ 0.01
VARS-223ENST00000474643 ENTPD2Q9Y5L3 495 aa15.12■□□□□ 0.01
VARS-223ENST00000474643 RAI2Q9Y5P3 530 aa15.12■□□□□ 0.01
VARS-223ENST00000474643 DGKBQ9Y6T7 804 aa15.12■□□□□ 0.01
VARS-223ENST00000474643 SMG1Q96Q15 3661 aaKnown RBP15.11■□□□□ 0.01
VARS-223ENST00000474643 IGSF10Q6WRI0 2623 aa15.11■□□□□ 0.01
VARS-223ENST00000474643 A0A0U1RQJ8 604 aa15.11■□□□□ 0.01
VARS-223ENST00000474643 PRSS38A1L453 326 aa15.11■□□□□ 0.01
VARS-223ENST00000474643 TNFRSF10CO14798 259 aa15.11■□□□□ 0.01
VARS-223ENST00000474643 ZSCAN12O43309 604 aa15.11■□□□□ 0.01
VARS-223ENST00000474643 DXOO77932 396 aaKnown RBP15.11■□□□□ 0.01
VARS-223ENST00000474643 TNFSF15O95150 251 aa15.11■□□□□ 0.01
VARS-223ENST00000474643 JMJD7P0C870 316 aa15.11■□□□□ 0.01
VARS-223ENST00000474643 MYCLP1P12525 358 aaPredicted RBP15.11■□□□□ 0.01
VARS-223ENST00000474643 CCNB1P14635 433 aa15.11■□□□□ 0.01
VARS-223ENST00000474643 INHBCP55103 352 aa15.11■□□□□ 0.01
VARS-223ENST00000474643 ILF3Q12906 894 aaKnown RBP eCLIP15.11■□□□□ 0.01
VARS-223ENST00000474643 SLC10A2Q12908 348 aaPredicted RBP15.11■□□□□ 0.01
VARS-223ENST00000474643 PEX6Q13608 980 aa15.11■□□□□ 0.01
VARS-223ENST00000474643 CNGA3Q16281 694 aa15.11■□□□□ 0.01
VARS-223ENST00000474643 HEATR4Q86WZ0 1026 aa15.11■□□□□ 0.01
VARS-223ENST00000474643 CCNJLQ8IV13 435 aa15.11■□□□□ 0.01
VARS-223ENST00000474643 RNF10Q8N5U6 811 aaKnown RBP15.11■□□□□ 0.01
VARS-223ENST00000474643 P3H4Q92791 437 aa15.11■□□□□ 0.01
VARS-223ENST00000474643 HDAC11Q96DB2 347 aa15.11■□□□□ 0.01
VARS-223ENST00000474643 TMEM74Q96NL1 305 aa15.11■□□□□ 0.01
VARS-223ENST00000474643 MGME1Q9BQP7 344 aa15.11■□□□□ 0.01
VARS-223ENST00000474643 HEMGNQ9BXL5 484 aa15.11■□□□□ 0.01
VARS-223ENST00000474643 DPH1Q9BZG8 443 aa15.11■□□□□ 0.01
VARS-223ENST00000474643 TMEM168Q9H0V1 697 aa15.11■□□□□ 0.01
VARS-223ENST00000474643 PRORYQ9H606 182 aa15.11■□□□□ 0.01
VARS-223ENST00000474643 FGF22Q9HCT0 170 aa15.11■□□□□ 0.01
VARS-223ENST00000474643 LZTFL1Q9NQ48 299 aa15.11■□□□□ 0.01
VARS-223ENST00000474643 RBM22Q9NW64 420 aaKnown RBP eCLIP15.11■□□□□ 0.015e-6■■■□□ 17
VARS-223ENST00000474643 PCDHGA8Q9Y5G5 932 aa15.11■□□□□ 0.01
VARS-223ENST00000474643 TEX51A0A1B0GUA7 166 aa15.1■□□□□ 0.01
VARS-223ENST00000474643 GOLGA6L9A6NEM1 432 aa15.1■□□□□ 0.01
VARS-223ENST00000474643 D6RAR5 112 aa15.1■□□□□ 0.01
VARS-223ENST00000474643 HEXIM1O94992 359 aaKnown RBP15.1■□□□□ 0.01
VARS-223ENST00000474643 FTCDO95954 541 aa15.1■□□□□ 0.01
VARS-223ENST00000474643 PEX11BO96011 259 aa15.1■□□□□ 0.01
VARS-223ENST00000474643 HOXC4P09017 264 aaPredicted RBP15.1■□□□□ 0.01
VARS-223ENST00000474643 CTPS1P17812 591 aa15.1■□□□□ 0.01
VARS-223ENST00000474643 CTNNA2P26232 953 aa15.1■□□□□ 0.01
VARS-223ENST00000474643 ETV3P41162 512 aa15.1■□□□□ 0.01
VARS-223ENST00000474643 GPR1P46091 355 aa15.1■□□□□ 0.01
VARS-223ENST00000474643 GNPDA1P46926 289 aa15.1■□□□□ 0.01
VARS-223ENST00000474643 COPS2P61201 443 aa15.1■□□□□ 0.01
VARS-223ENST00000474643 CCL7P80098 99 aa15.1■□□□□ 0.01
VARS-223ENST00000474643 EIF3IQ13347 325 aaKnown RBP15.1■□□□□ 0.01
VARS-223ENST00000474643 MAP9Q49MG5 647 aa15.1■□□□□ 0.01
VARS-223ENST00000474643 C14orf28Q4W4Y0 310 aa15.1■□□□□ 0.01
VARS-223ENST00000474643 ARHGAP40Q5TG30 622 aa15.1■□□□□ 0.01
VARS-223ENST00000474643 DOK6Q6PKX4 331 aa15.1■□□□□ 0.01
VARS-223ENST00000474643 FBXO39Q8N4B4 442 aa15.1■□□□□ 0.01
VARS-223ENST00000474643 LRRC57Q8N9N7 239 aa15.1■□□□□ 0.01
VARS-223ENST00000474643 HAUS1Q96CS2 278 aa15.1■□□□□ 0.01
VARS-223ENST00000474643 TSGA13Q96PP4 275 aa15.1■□□□□ 0.01
VARS-223ENST00000474643 SEMA3CQ99985 751 aa15.1■□□□□ 0.01
VARS-223ENST00000474643 GSDMCQ9BYG8 508 aa15.1■□□□□ 0.01
VARS-223ENST00000474643 FOXP3Q9BZS1 431 aa15.1■□□□□ 0.01
VARS-223ENST00000474643 AKAP7Q9P0M2 348 aaPredicted RBP15.1■□□□□ 0.01
VARS-223ENST00000474643 hCG_1818297A0A087WSY0 165 aa15.09■□□□□ 0.01
VARS-223ENST00000474643 RHPN2P1A8MT19 583 aa15.09■□□□□ 0.01
VARS-223ENST00000474643 MIF4GDA9UHW6 222 aaKnown RBP15.09■□□□□ 0.01
VARS-223ENST00000474643 KCNK1O00180 336 aa15.09■□□□□ 0.01
VARS-223ENST00000474643 PSMD11O00231 422 aa15.09■□□□□ 0.01
VARS-223ENST00000474643 AGRPO00253 132 aa15.09■□□□□ 0.01
VARS-223ENST00000474643 PLD2O14939 933 aa15.09■□□□□ 0.01
VARS-223ENST00000474643 HTRA2O43464 458 aaPredicted RBP15.09■□□□□ 0.01
VARS-223ENST00000474643 PGLSO95336 258 aa15.09■□□□□ 0.01
VARS-223ENST00000474643 JCHAINP01591 159 aa15.09■□□□□ 0.01
VARS-223ENST00000474643 GLB1P16278 677 aa15.09■□□□□ 0.01
VARS-223ENST00000474643 MLLT3P42568 568 aaPredicted RBP15.09■□□□□ 0.01
VARS-223ENST00000474643 NR2C2P49116 596 aa15.09■□□□□ 0.01
VARS-223ENST00000474643 PPIDQ08752 370 aaKnown RBP15.09■□□□□ 0.01
VARS-223ENST00000474643 TRAF2Q12933 501 aa15.09■□□□□ 0.01
VARS-223ENST00000474643 PPP2R5EQ16537 467 aa15.09■□□□□ 0.01
VARS-223ENST00000474643 RAB11FIP2Q7L804 512 aa15.09■□□□□ 0.01
VARS-223ENST00000474643 NT5DC3Q86UY8 548 aa15.09■□□□□ 0.01
VARS-223ENST00000474643 PGBD5Q8N414 524 aa15.09■□□□□ 0.01
VARS-223ENST00000474643 SLC39A7Q92504 469 aa15.09■□□□□ 0.01
VARS-223ENST00000474643 MAML1Q92585 1016 aa15.09■□□□□ 0.01
VARS-223ENST00000474643 DTD2Q96FN9 168 aa15.09■□□□□ 0.01
VARS-223ENST00000474643 HIC2Q96JB3 615 aa15.09■□□□□ 0.01
VARS-223ENST00000474643 COQ10AQ96MF6 247 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms