RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 CPNE5Q9HCH3 593 aa15.25■□□□□ 0.03
VTI1A-203ENST00000472892 EPB41L5Q9HCM4 733 aa15.25■□□□□ 0.03
VTI1A-203ENST00000472892 PCDHGA7Q9Y5G6 932 aa15.25■□□□□ 0.03
VTI1A-203ENST00000472892 ST14Q9Y5Y6 855 aa15.25■□□□□ 0.03
VTI1A-203ENST00000472892 SHROOM3Q8TF72 1996 aa15.24■□□□□ 0.03
VTI1A-203ENST00000472892 SSU72P8A0A1W2PR75 194 aa15.24■□□□□ 0.03
VTI1A-203ENST00000472892 B4GAT1O43505 415 aa15.24■□□□□ 0.03
VTI1A-203ENST00000472892 MAP3K6O95382 1288 aa15.24■□□□□ 0.03
VTI1A-203ENST00000472892 TMEM253P0C7T8 217 aa15.24■□□□□ 0.03
VTI1A-203ENST00000472892 KDELR1P24390 212 aa15.24■□□□□ 0.03
VTI1A-203ENST00000472892 UGT1A5P35504 534 aa15.24■□□□□ 0.03
VTI1A-203ENST00000472892 GPR1P46091 355 aa15.24■□□□□ 0.03
VTI1A-203ENST00000472892 GNPDA1P46926 289 aa15.24■□□□□ 0.03
VTI1A-203ENST00000472892 RPL26P61254 145 aaKnown RBP15.24■□□□□ 0.03
VTI1A-203ENST00000472892 NIPAL4Q0D2K0 466 aa15.24■□□□□ 0.03
VTI1A-203ENST00000472892 ILF3Q12906 894 aaKnown RBP eCLIP15.24■□□□□ 0.03
VTI1A-203ENST00000472892 PCSK4Q6UW60 755 aa15.24■□□□□ 0.03
VTI1A-203ENST00000472892 ZNF765Q7L2R6 523 aa15.24■□□□□ 0.03
VTI1A-203ENST00000472892 ZNF438Q7Z4V0 828 aa15.24■□□□□ 0.03
VTI1A-203ENST00000472892 ZDHHC1Q8WTX9 485 aa15.24■□□□□ 0.03
VTI1A-203ENST00000472892 RAPGEF5Q92565 580 aa15.24■□□□□ 0.03
VTI1A-203ENST00000472892 AP2M1Q96CW1 435 aa15.24■□□□□ 0.03
VTI1A-203ENST00000472892 TDRD1Q9BXT4 1180 aaKnown RBP15.24■□□□□ 0.03
VTI1A-203ENST00000472892 HAUS2Q9NVX0 235 aa15.24■□□□□ 0.03
VTI1A-203ENST00000472892 TAAR2Q9P1P5 351 aa15.24■□□□□ 0.03
VTI1A-203ENST00000472892 CD84Q9UIB8 345 aa15.24■□□□□ 0.03
VTI1A-203ENST00000472892 ATXN7L1Q9ULK2 861 aaPredicted RBP15.24■□□□□ 0.03
VTI1A-203ENST00000472892 RPL26L1Q9UNX3 145 aaKnown RBP15.24■□□□□ 0.03
VTI1A-203ENST00000472892 CHKBQ9Y259 395 aa15.24■□□□□ 0.03
VTI1A-203ENST00000472892 KIF26BQ2KJY2 2108 aa15.23■□□□□ 0.03
VTI1A-203ENST00000472892 MGAQ8IWI9 3026 aa15.23■□□□□ 0.03
VTI1A-203ENST00000472892 GOLGA6CA6NDK9 693 aa15.23■□□□□ 0.03
VTI1A-203ENST00000472892 GOLGA6BA6NDN3 693 aa15.23■□□□□ 0.03
VTI1A-203ENST00000472892 HLA-DQB2P05538 268 aa15.23■□□□□ 0.03
VTI1A-203ENST00000472892 PYGLP06737 847 aa15.23■□□□□ 0.03
VTI1A-203ENST00000472892 GOLGA6DP0CG33 693 aa15.23■□□□□ 0.03
VTI1A-203ENST00000472892 AK4P27144 223 aaPredicted RBP15.23■□□□□ 0.03
VTI1A-203ENST00000472892 SLC5A2P31639 672 aa15.23■□□□□ 0.03
VTI1A-203ENST00000472892 ADCY8P40145 1251 aa15.23■□□□□ 0.03
VTI1A-203ENST00000472892 STC1P52823 247 aa15.23■□□□□ 0.03
VTI1A-203ENST00000472892 EPHB1P54762 984 aa15.23■□□□□ 0.03
VTI1A-203ENST00000472892 CTBSQ01459 385 aa15.23■□□□□ 0.03
VTI1A-203ENST00000472892 VAC14Q08AM6 782 aa15.23■□□□□ 0.03
VTI1A-203ENST00000472892 CLN3Q13286 438 aa15.23■□□□□ 0.03
VTI1A-203ENST00000472892 TRIM14Q14142 442 aa15.23■□□□□ 0.03
VTI1A-203ENST00000472892 NR1D2Q14995 579 aa15.23■□□□□ 0.03
VTI1A-203ENST00000472892 ARHGAP40Q5TG30 622 aa15.23■□□□□ 0.03
VTI1A-203ENST00000472892 CCDC13Q8IYE1 715 aa15.23■□□□□ 0.03
VTI1A-203ENST00000472892 NRSN1Q8IZ57 195 aa15.23■□□□□ 0.03
VTI1A-203ENST00000472892 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.23■□□□□ 0.03
VTI1A-203ENST00000472892 SLC35G2Q8TBE7 412 aa15.23■□□□□ 0.03
VTI1A-203ENST00000472892 LRRN4Q8WUT4 740 aa15.23■□□□□ 0.03
VTI1A-203ENST00000472892 SCAMP4Q969E2 229 aa15.23■□□□□ 0.03
VTI1A-203ENST00000472892 TMEM159Q96B96 161 aa15.23■□□□□ 0.03
VTI1A-203ENST00000472892 HDAC11Q96DB2 347 aa15.23■□□□□ 0.03
VTI1A-203ENST00000472892 RNF157Q96PX1 679 aa15.23■□□□□ 0.03
VTI1A-203ENST00000472892 LYSMD1Q96S90 227 aa15.23■□□□□ 0.03
VTI1A-203ENST00000472892 SUDS3Q9H7L9 328 aaPredicted RBP15.23■□□□□ 0.03
VTI1A-203ENST00000472892 GOLGA6AQ9NYA3 693 aa15.23■□□□□ 0.03
VTI1A-203ENST00000472892 DTLQ9NZJ0 730 aa15.23■□□□□ 0.03
VTI1A-203ENST00000472892 ACSL6Q9UKU0 697 aa15.23■□□□□ 0.03
VTI1A-203ENST00000472892 DNPEPQ9ULA0 475 aa15.23■□□□□ 0.03
VTI1A-203ENST00000472892 CAPN8A6NHC0 703 aa15.22■□□□□ 0.03
VTI1A-203ENST00000472892 ZNF487B1APH4 448 aa15.22■□□□□ 0.03
VTI1A-203ENST00000472892 ERVH48-1M5A8F1 160 aa15.22■□□□□ 0.03
VTI1A-203ENST00000472892 CBFA2T2O43439 604 aa15.22■□□□□ 0.03
VTI1A-203ENST00000472892 AKR1B10O60218 316 aa15.22■□□□□ 0.03
VTI1A-203ENST00000472892 C1QL1O75973 258 aa15.22■□□□□ 0.03
VTI1A-203ENST00000472892 CLDN7O95471 211 aa15.22■□□□□ 0.03
VTI1A-203ENST00000472892 ECEL1O95672 775 aa15.22■□□□□ 0.03
VTI1A-203ENST00000472892 PRB1P04280 392 aa15.22■□□□□ 0.03
VTI1A-203ENST00000472892 HGFP14210 728 aa15.22■□□□□ 0.03
VTI1A-203ENST00000472892 CA4P22748 312 aa15.22■□□□□ 0.03
VTI1A-203ENST00000472892 ARHGAP25P42331 645 aa15.22■□□□□ 0.03
VTI1A-203ENST00000472892 MAZP56270 477 aaKnown RBP15.22■□□□□ 0.03
VTI1A-203ENST00000472892 RHDQ02161 417 aa15.22■□□□□ 0.03
VTI1A-203ENST00000472892 PEX6Q13608 980 aa15.22■□□□□ 0.03
VTI1A-203ENST00000472892 MESDQ14696 234 aa15.22■□□□□ 0.03
VTI1A-203ENST00000472892 CLPPQ16740 277 aaPredicted RBP15.22■□□□□ 0.03
VTI1A-203ENST00000472892 SKOR2Q2VWA4 1001 aaPredicted RBP15.22■□□□□ 0.03
VTI1A-203ENST00000472892 SLC30A9Q6PML9 568 aa15.22■□□□□ 0.03
VTI1A-203ENST00000472892 TMPRSS9Q7Z410 1059 aa15.22■□□□□ 0.03
VTI1A-203ENST00000472892 SLITRK4Q8IW52 837 aa15.22■□□□□ 0.03
VTI1A-203ENST00000472892 CCNYQ8ND76 341 aa15.22■□□□□ 0.03
VTI1A-203ENST00000472892 EXD1Q8NHP7 514 aa15.22■□□□□ 0.03
VTI1A-203ENST00000472892 WBP1Q96G27 269 aa15.22■□□□□ 0.03
VTI1A-203ENST00000472892 COX14Q96I36 57 aa15.22■□□□□ 0.03
VTI1A-203ENST00000472892 AGAP2Q99490 1192 aa15.22■□□□□ 0.03
VTI1A-203ENST00000472892 RIOK2Q9BVS4 552 aaKnown RBP15.22■□□□□ 0.03
VTI1A-203ENST00000472892 DEF6Q9H4E7 631 aa15.22■□□□□ 0.03
VTI1A-203ENST00000472892 PCDH9Q9HC56 1237 aa15.22■□□□□ 0.03
VTI1A-203ENST00000472892 ZNHIT6Q9NWK9 470 aaKnown RBP15.22■□□□□ 0.03
VTI1A-203ENST00000472892 TMEM98Q9Y2Y6 226 aa15.22■□□□□ 0.03
VTI1A-203ENST00000472892 LOXL2Q9Y4K0 774 aa15.22■□□□□ 0.03
VTI1A-203ENST00000472892 TTLL3Q9Y4R7 772 aa15.22■□□□□ 0.03
VTI1A-203ENST00000472892 C3orf70A6NLC5 250 aaPredicted RBP15.21■□□□□ 0.03
VTI1A-203ENST00000472892 RHPN2P1A8MT19 583 aa15.21■□□□□ 0.03
VTI1A-203ENST00000472892 ANKRD66B4E2M5 251 aa15.21■□□□□ 0.03
VTI1A-203ENST00000472892 K7ENP7 123 aa15.21■□□□□ 0.03
VTI1A-203ENST00000472892 NVLO15381 856 aaKnown RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms