RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 SYN2Q92777 582 aaPredicted RBP8.06□□□□□ -1.12
USP48-207ENST00000471752 SCRN2Q96FV2 425 aa8.06□□□□□ -1.12
USP48-207ENST00000471752 TBATAQ96M53 351 aa8.06□□□□□ -1.12
USP48-207ENST00000471752 ZNF599Q96NL3 588 aa8.06□□□□□ -1.12
USP48-207ENST00000471752 MCCC1Q96RQ3 725 aaPredicted RBP8.06□□□□□ -1.12
USP48-207ENST00000471752 UBL7Q96S82 380 aaPredicted RBP8.06□□□□□ -1.12
USP48-207ENST00000471752 RIOK2Q9BVS4 552 aaKnown RBP8.06□□□□□ -1.12
USP48-207ENST00000471752 C1QTNF7Q9BXJ2 289 aa8.06□□□□□ -1.12
USP48-207ENST00000471752 DPEP2Q9H4A9 486 aa8.06□□□□□ -1.12
USP48-207ENST00000471752 WDR26Q9H7D7 661 aa8.06□□□□□ -1.12
USP48-207ENST00000471752 RBM22Q9NW64 420 aaKnown RBP eCLIP8.06□□□□□ -1.124e-9■■■■□ 21.1
USP48-207ENST00000471752 GOLGA6AQ9NYA3 693 aa8.06□□□□□ -1.12
USP48-207ENST00000471752 TAAR2Q9P1P5 351 aa8.06□□□□□ -1.12
USP48-207ENST00000471752 PISDQ9UG56 409 aa8.06□□□□□ -1.12
USP48-207ENST00000471752 TFR2Q9UP52 801 aa8.06□□□□□ -1.12
USP48-207ENST00000471752 PPIL1Q9Y3C6 166 aa8.06□□□□□ -1.12
USP48-207ENST00000471752 SCINQ9Y6U3 715 aa8.06□□□□□ -1.12
USP48-207ENST00000471752 RELNP78509 3460 aa8.06□□□□□ -1.12
USP48-207ENST00000471752 CCDC187A0A096LP49 1063 aa8.05□□□□□ -1.12
USP48-207ENST00000471752 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.05□□□□□ -1.12
USP48-207ENST00000471752 EIF3CLB5ME19 914 aaKnown RBP8.05□□□□□ -1.12
USP48-207ENST00000471752 C9orf172C9J069 976 aa8.05□□□□□ -1.12
USP48-207ENST00000471752 KCNK1O00180 336 aa8.05□□□□□ -1.12
USP48-207ENST00000471752 TOR1BO14657 336 aa8.05□□□□□ -1.12
USP48-207ENST00000471752 TNFRSF10CO14798 259 aa8.05□□□□□ -1.12
USP48-207ENST00000471752 PLD2O14939 933 aa8.05□□□□□ -1.12
USP48-207ENST00000471752 INPP4BO15327 924 aa8.05□□□□□ -1.12
USP48-207ENST00000471752 PRAMEF10O60809 474 aa8.05□□□□□ -1.12
USP48-207ENST00000471752 TCEA3O75764 348 aa8.05□□□□□ -1.12
USP48-207ENST00000471752 PROSCO94903 275 aa8.05□□□□□ -1.12
USP48-207ENST00000471752 MYCLP1P12525 358 aaPredicted RBP8.05□□□□□ -1.12
USP48-207ENST00000471752 CCNB1P14635 433 aa8.05□□□□□ -1.12
USP48-207ENST00000471752 ALDH4A1P30038 563 aa8.05□□□□□ -1.12
USP48-207ENST00000471752 GARSP41250 739 aaKnown RBP8.05□□□□□ -1.12
USP48-207ENST00000471752 NOP2P46087 812 aaKnown RBP8.05□□□□□ -1.12
USP48-207ENST00000471752 RPIAP49247 311 aa8.05□□□□□ -1.12
USP48-207ENST00000471752 BLKP51451 505 aa8.05□□□□□ -1.12
USP48-207ENST00000471752 RENBPP51606 427 aa8.05□□□□□ -1.12
USP48-207ENST00000471752 MAPK10P53779 464 aa8.05□□□□□ -1.12
USP48-207ENST00000471752 INHBCP55103 352 aa8.05□□□□□ -1.12
USP48-207ENST00000471752 POLR2LP62875 67 aaKnown RBP8.05□□□□□ -1.12
USP48-207ENST00000471752 CDK3Q00526 305 aa8.05□□□□□ -1.12
USP48-207ENST00000471752 ADCY2Q08462 1091 aa8.05□□□□□ -1.12
USP48-207ENST00000471752 GALNT2Q10471 571 aa8.05□□□□□ -1.12
USP48-207ENST00000471752 PIGHQ14442 188 aaPredicted RBP8.05□□□□□ -1.12
USP48-207ENST00000471752 KRT81Q14533 505 aa8.05□□□□□ -1.12
USP48-207ENST00000471752 GRM3Q14832 879 aa8.05□□□□□ -1.12
USP48-207ENST00000471752 ZSCAN23Q3MJ62 389 aa8.05□□□□□ -1.12
USP48-207ENST00000471752 LINC00303Q3SY05 128 aa8.05□□□□□ -1.12
USP48-207ENST00000471752 C14orf28Q4W4Y0 310 aa8.05□□□□□ -1.12
USP48-207ENST00000471752 CLEC14AQ86T13 490 aa8.05□□□□□ -1.12
USP48-207ENST00000471752 JAMLQ86YT9 394 aa8.05□□□□□ -1.12
USP48-207ENST00000471752 LSMEM2Q8N112 164 aa8.05□□□□□ -1.12
USP48-207ENST00000471752 ATPAF2Q8N5M1 289 aa8.05□□□□□ -1.12
USP48-207ENST00000471752 PAF1Q8N7H5 531 aa8.05□□□□□ -1.12
USP48-207ENST00000471752 KCTD6Q8NC69 237 aa8.05□□□□□ -1.12
USP48-207ENST00000471752 TPCN2Q8NHX9 752 aa8.05□□□□□ -1.12
USP48-207ENST00000471752 ZNF564Q8TBZ8 553 aaPredicted RBP8.05□□□□□ -1.12
USP48-207ENST00000471752 ZDHHC1Q8WTX9 485 aa8.05□□□□□ -1.12
USP48-207ENST00000471752 TEKT4Q8WW24 435 aa8.05□□□□□ -1.12
USP48-207ENST00000471752 SCG3Q8WXD2 468 aaKnown RBP8.05□□□□□ -1.12
USP48-207ENST00000471752 MAML1Q92585 1016 aa8.05□□□□□ -1.12
USP48-207ENST00000471752 GLMNQ92990 594 aa8.05□□□□□ -1.12
USP48-207ENST00000471752 USP7Q93009 1102 aa8.05□□□□□ -1.12
USP48-207ENST00000471752 NAT6Q93015 286 aa8.05□□□□□ -1.12
USP48-207ENST00000471752 EIF3CQ99613 913 aaKnown RBP8.05□□□□□ -1.12
USP48-207ENST00000471752 MRPL47Q9HD33 250 aaKnown RBP8.05□□□□□ -1.12
USP48-207ENST00000471752 THSD1Q9NS62 852 aa8.05□□□□□ -1.12
USP48-207ENST00000471752 SPTLC3Q9NUV7 552 aa8.05□□□□□ -1.12
USP48-207ENST00000471752 CTTNBP2NLQ9P2B4 639 aa8.05□□□□□ -1.12
USP48-207ENST00000471752 SAE1Q9UBE0 346 aaPredicted RBP8.05□□□□□ -1.12
USP48-207ENST00000471752 IP6K2Q9UHH9 426 aa8.05□□□□□ -1.12
USP48-207ENST00000471752 APPL1Q9UKG1 709 aa8.05□□□□□ -1.12
USP48-207ENST00000471752 PHTF1Q9UMS5 762 aa8.05□□□□□ -1.12
USP48-207ENST00000471752 SLC17A4Q9Y2C5 497 aa8.05□□□□□ -1.12
USP48-207ENST00000471752 LUC7L2Q9Y383 392 aaKnown RBP8.05□□□□□ -1.12
USP48-207ENST00000471752 LOXL2Q9Y4K0 774 aa8.05□□□□□ -1.12
USP48-207ENST00000471752 PCDHGA8Q9Y5G5 932 aa8.05□□□□□ -1.12
USP48-207ENST00000471752 LRP4O75096 1905 aa8.05□□□□□ -1.12
USP48-207ENST00000471752 NBASA2RRP1 2371 aa8.05□□□□□ -1.12
USP48-207ENST00000471752 IGHV5-10-1A0A0J9YXX1 117 aa8.04□□□□□ -1.12
USP48-207ENST00000471752 A0A0J9YYE9 177 aa8.04□□□□□ -1.12
USP48-207ENST00000471752 FADS2P1A8MWK0 482 aa8.04□□□□□ -1.12
USP48-207ENST00000471752 MYO1FO00160 1098 aa8.04□□□□□ -1.12
USP48-207ENST00000471752 MATN3O15232 486 aa8.04□□□□□ -1.12
USP48-207ENST00000471752 SOCS5O75159 536 aa8.04□□□□□ -1.12
USP48-207ENST00000471752 TRBC1P01850 177 aa8.04□□□□□ -1.12
USP48-207ENST00000471752 FGF3P11487 239 aaPredicted RBP8.04□□□□□ -1.12
USP48-207ENST00000471752 PLA2G2AP14555 144 aa8.04□□□□□ -1.12
USP48-207ENST00000471752 GLB1P16278 677 aa8.04□□□□□ -1.12
USP48-207ENST00000471752 KDELR1P24390 212 aa8.04□□□□□ -1.12
USP48-207ENST00000471752 CSF2RBP32927 897 aa8.04□□□□□ -1.12
USP48-207ENST00000471752 CD86P42081 329 aa8.04□□□□□ -1.12
USP48-207ENST00000471752 STC1P52823 247 aa8.04□□□□□ -1.12
USP48-207ENST00000471752 NFKB2Q00653 900 aa8.04□□□□□ -1.12
USP48-207ENST00000471752 VAC14Q08AM6 782 aa8.04□□□□□ -1.12
USP48-207ENST00000471752 MESDQ14696 234 aa8.04□□□□□ -1.12
USP48-207ENST00000471752 PAFAH1B3Q15102 231 aaKnown RBP8.04□□□□□ -1.12
USP48-207ENST00000471752 NOMO1Q15155 1222 aa8.04□□□□□ -1.12
USP48-207ENST00000471752 QPCTQ16769 361 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms