RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 ACSL3O95573 720 aa11.22□□□□□ -0.61
SREBF1-209ENST00000470247 SEMA4FO95754 770 aa11.22□□□□□ -0.61
SREBF1-209ENST00000470247 SLC4A1P02730 911 aa11.22□□□□□ -0.61
SREBF1-209ENST00000470247 GSTA2P09210 222 aa11.22□□□□□ -0.61
SREBF1-209ENST00000470247 TBC1D3HP0C7X1 549 aa11.22□□□□□ -0.61
SREBF1-209ENST00000470247 CD6P30203 668 aa11.22□□□□□ -0.61
SREBF1-209ENST00000470247 OXTRP30559 389 aa11.22□□□□□ -0.61
SREBF1-209ENST00000470247 FOXN2P32314 431 aa11.22□□□□□ -0.61
SREBF1-209ENST00000470247 HSD17B3P37058 310 aa11.22□□□□□ -0.61
SREBF1-209ENST00000470247 FNTBP49356 437 aa11.22□□□□□ -0.61
SREBF1-209ENST00000470247 PTPN5P54829 565 aa11.22□□□□□ -0.61
SREBF1-209ENST00000470247 RPS21P63220 83 aaKnown RBP11.22□□□□□ -0.61
SREBF1-209ENST00000470247 ACOX1Q15067 660 aa11.22□□□□□ -0.61
SREBF1-209ENST00000470247 CHRNA6Q15825 494 aa11.22□□□□□ -0.61
SREBF1-209ENST00000470247 LRRK1Q38SD2 2015 aa11.22□□□□□ -0.61
SREBF1-209ENST00000470247 GON4LQ3T8J9 2241 aa11.22□□□□□ -0.61
SREBF1-209ENST00000470247 HENMT1Q5T8I9 393 aaKnown RBP11.22□□□□□ -0.61
SREBF1-209ENST00000470247 TBC1D3GQ6DHY5 549 aa11.22□□□□□ -0.61
SREBF1-209ENST00000470247 TBC1D3CQ6IPX1 549 aa11.22□□□□□ -0.61
SREBF1-209ENST00000470247 KIAA1161Q6NSJ0 714 aa11.22□□□□□ -0.61
SREBF1-209ENST00000470247 CAPN12Q6ZSI9 719 aa11.22□□□□□ -0.61
SREBF1-209ENST00000470247 NLRP8Q86W28 1048 aa11.22□□□□□ -0.61
SREBF1-209ENST00000470247 TRIM69Q86WT6 500 aa11.22□□□□□ -0.61
SREBF1-209ENST00000470247 NRSN1Q8IZ57 195 aa11.22□□□□□ -0.61
SREBF1-209ENST00000470247 TBC1D3Q8IZP1 549 aaPredicted RBP11.22□□□□□ -0.61
SREBF1-209ENST00000470247 PNPLA1Q8N8W4 532 aa11.22□□□□□ -0.61
SREBF1-209ENST00000470247 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.22□□□□□ -0.61
SREBF1-209ENST00000470247 GSDMBQ8TAX9 411 aa11.22□□□□□ -0.61
SREBF1-209ENST00000470247 DTX3LQ8TDB6 740 aa11.22□□□□□ -0.61
SREBF1-209ENST00000470247 CXorf40AQ8TE69 158 aa11.22□□□□□ -0.61
SREBF1-209ENST00000470247 AGAP2Q99490 1192 aa11.22□□□□□ -0.61
SREBF1-209ENST00000470247 KLF6Q99612 283 aaPredicted RBP11.22□□□□□ -0.61
SREBF1-209ENST00000470247 ORAI3Q9BRQ5 295 aa11.22□□□□□ -0.61
SREBF1-209ENST00000470247 C6orf106Q9H6K1 298 aaPredicted RBP11.22□□□□□ -0.61
SREBF1-209ENST00000470247 PKD2L2Q9NZM6 624 aa11.22□□□□□ -0.61
SREBF1-209ENST00000470247 CD84Q9UIB8 345 aa11.22□□□□□ -0.61
SREBF1-209ENST00000470247 RABGEF1Q9UJ41 708 aa11.22□□□□□ -0.61
SREBF1-209ENST00000470247 INVSQ9Y283 1065 aa11.22□□□□□ -0.61
SREBF1-209ENST00000470247 PKP3Q9Y446 797 aa11.22□□□□□ -0.61
SREBF1-209ENST00000470247 ABCA7Q8IZY2 2146 aa11.21□□□□□ -0.61
SREBF1-209ENST00000470247 SCN8AQ9UQD0 1980 aa11.21□□□□□ -0.61
SREBF1-209ENST00000470247 PRR23AA6NEV1 266 aa11.21□□□□□ -0.61
SREBF1-209ENST00000470247 FAM47DPA6NHR8 397 aa11.21□□□□□ -0.61
SREBF1-209ENST00000470247 FAM159BA6NKW6 160 aa11.21□□□□□ -0.61
SREBF1-209ENST00000470247 AGAP14A8MT82 685 aa11.21□□□□□ -0.61
SREBF1-209ENST00000470247 CXorf49A8MYA2 514 aaPredicted RBP11.21□□□□□ -0.61
SREBF1-209ENST00000470247 GOLGA8KD6RF30 607 aa11.21□□□□□ -0.61
SREBF1-209ENST00000470247 GOLGA8TH3BQL2 631 aa11.21□□□□□ -0.61
SREBF1-209ENST00000470247 WNT9AO14904 365 aa11.21□□□□□ -0.61
SREBF1-209ENST00000470247 RAD51BO15315 384 aa11.21□□□□□ -0.61
SREBF1-209ENST00000470247 LZTS3O60299 673 aaPredicted RBP11.21□□□□□ -0.61
SREBF1-209ENST00000470247 PIAS1O75925 651 aa11.21□□□□□ -0.61
SREBF1-209ENST00000470247 PAK4O96013 591 aaPredicted RBP11.21□□□□□ -0.61
SREBF1-209ENST00000470247 SOD1P00441 154 aa11.21□□□□□ -0.61
SREBF1-209ENST00000470247 GOT2P00505 430 aaKnown RBP11.21□□□□□ -0.61
SREBF1-209ENST00000470247 IGHV4-34P06331 123 aa11.21□□□□□ -0.61
SREBF1-209ENST00000470247 ABHD2P08910 425 aa11.21□□□□□ -0.61
SREBF1-209ENST00000470247 PRSS56P0CW18 603 aa11.21□□□□□ -0.61
SREBF1-209ENST00000470247 ERVK-10P10266 1014 aa11.21□□□□□ -0.61
SREBF1-209ENST00000470247 BCKDHBP21953 392 aa11.21□□□□□ -0.61
SREBF1-209ENST00000470247 HADHAP40939 763 aa11.21□□□□□ -0.61
SREBF1-209ENST00000470247 CDKN1CP49918 316 aaPredicted RBP11.21□□□□□ -0.61
SREBF1-209ENST00000470247 DCDC1P59894 354 aa11.21□□□□□ -0.61
SREBF1-209ENST00000470247 DPTQ07507 201 aa11.21□□□□□ -0.61
SREBF1-209ENST00000470247 SLC29A2Q14542 456 aa11.21□□□□□ -0.61
SREBF1-209ENST00000470247 SEMA3AQ14563 771 aa11.21□□□□□ -0.61
SREBF1-209ENST00000470247 LONRF1Q17RB8 773 aa11.21□□□□□ -0.61
SREBF1-209ENST00000470247 WSCD2Q2TBF2 565 aa11.21□□□□□ -0.61
SREBF1-209ENST00000470247 MAP9Q49MG5 647 aa11.21□□□□□ -0.61
SREBF1-209ENST00000470247 SPDYCQ5MJ68 293 aa11.21□□□□□ -0.61
SREBF1-209ENST00000470247 TEDDM1Q5T9Z0 273 aa11.21□□□□□ -0.61
SREBF1-209ENST00000470247 ZNF765Q7L2R6 523 aa11.21□□□□□ -0.61
SREBF1-209ENST00000470247 WDR5BQ86VZ2 330 aa11.21□□□□□ -0.61
SREBF1-209ENST00000470247 PIANPQ8IYJ0 282 aa11.21□□□□□ -0.61
SREBF1-209ENST00000470247 FBF1Q8TES7 1133 aa11.21□□□□□ -0.61
SREBF1-209ENST00000470247 ASB12Q8WXK4 309 aa11.21□□□□□ -0.61
SREBF1-209ENST00000470247 ANKRD7Q92527 254 aa11.21□□□□□ -0.61
SREBF1-209ENST00000470247 KLK6Q92876 244 aa11.21□□□□□ -0.61
SREBF1-209ENST00000470247 FUBP1Q96AE4 644 aaKnown RBP11.21□□□□□ -0.61
SREBF1-209ENST00000470247 CENPTQ96BT3 561 aa11.21□□□□□ -0.61
SREBF1-209ENST00000470247 CERS2Q96G23 380 aa11.21□□□□□ -0.61
SREBF1-209ENST00000470247 TTC25Q96NG3 672 aa11.21□□□□□ -0.61
SREBF1-209ENST00000470247 PLEKHG4BQ96PX9 1271 aa11.21□□□□□ -0.61
SREBF1-209ENST00000470247 RIOK2Q9BVS4 552 aaKnown RBP11.21□□□□□ -0.61
SREBF1-209ENST00000470247 GPR174Q9BXC1 333 aa11.21□□□□□ -0.61
SREBF1-209ENST00000470247 SLC17A9Q9BYT1 436 aa11.21□□□□□ -0.61
SREBF1-209ENST00000470247 FAM83DQ9H4H8 585 aa11.21□□□□□ -0.61
SREBF1-209ENST00000470247 VPS37BQ9H9H4 285 aa11.21□□□□□ -0.61
SREBF1-209ENST00000470247 MBNL1Q9NR56 388 aaKnown RBP11.21□□□□□ -0.61
SREBF1-209ENST00000470247 MARCH4Q9P2E8 410 aaPredicted RBP11.21□□□□□ -0.61
SREBF1-209ENST00000470247 FBXO4Q9UKT5 387 aa11.21□□□□□ -0.61
SREBF1-209ENST00000470247 CNOT6Q9ULM6 557 aaKnown RBP11.21□□□□□ -0.61
SREBF1-209ENST00000470247 EML5Q05BV3 1969 aa11.2□□□□□ -0.62
SREBF1-209ENST00000470247 TRBV5-4A0A0C4DH59 114 aa11.2□□□□□ -0.62
SREBF1-209ENST00000470247 LRRC72A6NJI9 287 aa11.2□□□□□ -0.62
SREBF1-209ENST00000470247 FADS2P1A8MWK0 482 aa11.2□□□□□ -0.62
SREBF1-209ENST00000470247 K7ESM1 405 aa11.2□□□□□ -0.62
SREBF1-209ENST00000470247 GPR39O43194 453 aa11.2□□□□□ -0.62
SREBF1-209ENST00000470247 UGT1A9O60656 530 aa11.2□□□□□ -0.62
SREBF1-209ENST00000470247 ERLIN1O75477 346 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms