RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 ADRA1BP35368 520 aa11.93□□□□□ -0.5
LSM2-209ENST00000470083 KRT9P35527 623 aa11.93□□□□□ -0.5
LSM2-209ENST00000470083 POLD2P49005 469 aa11.93□□□□□ -0.5
LSM2-209ENST00000470083 PLXDC1Q8IUK5 500 aa11.93□□□□□ -0.5
LSM2-209ENST00000470083 RHOT1Q8IXI2 618 aa11.93□□□□□ -0.5
LSM2-209ENST00000470083 RBMXL3Q8N7X1 1067 aaKnown RBP11.93□□□□□ -0.5
LSM2-209ENST00000470083 CT55Q8WUE5 264 aa11.93□□□□□ -0.5
LSM2-209ENST00000470083 SH3KBP1Q96B97 665 aa11.93□□□□□ -0.5
LSM2-209ENST00000470083 SNRNP40Q96DI7 357 aaKnown RBP11.93□□□□□ -0.5
LSM2-209ENST00000470083 POM121Q96HA1 1249 aa11.93□□□□□ -0.5
LSM2-209ENST00000470083 FAM81BQ96LP2 452 aa11.93□□□□□ -0.5
LSM2-209ENST00000470083 BRD8Q9H0E9 1235 aa11.93□□□□□ -0.5
LSM2-209ENST00000470083 EPB41L1Q9H4G0 881 aa11.93□□□□□ -0.5
LSM2-209ENST00000470083 ATP13A3Q9H7F0 1226 aa11.93□□□□□ -0.5
LSM2-209ENST00000470083 LHX9Q9NQ69 397 aa11.93□□□□□ -0.5
LSM2-209ENST00000470083 KCTD5Q9NXV2 234 aa11.93□□□□□ -0.5
LSM2-209ENST00000470083 LNPEPQ9UIQ6 1025 aa11.93□□□□□ -0.5
LSM2-209ENST00000470083 PLEKHM1Q9Y4G2 1056 aa11.93□□□□□ -0.5
LSM2-209ENST00000470083 ANKRD36A6QL64 1941 aa11.92□□□□□ -0.5
LSM2-209ENST00000470083 TRBV23OR9-2A0A075B6M9 112 aa11.92□□□□□ -0.5
LSM2-209ENST00000470083 HEATR9A2RTY3 570 aa11.92□□□□□ -0.5
LSM2-209ENST00000470083 ARGFXA6NJG6 315 aa11.92□□□□□ -0.5
LSM2-209ENST00000470083 MT-ND3P03897 115 aa11.92□□□□□ -0.5
LSM2-209ENST00000470083 TEAD1P28347 426 aa11.92□□□□□ -0.5
LSM2-209ENST00000470083 MAPK9P45984 424 aa11.92□□□□□ -0.5
LSM2-209ENST00000470083 GABRB2P47870 512 aa11.92□□□□□ -0.5
LSM2-209ENST00000470083 PTK2Q05397 1052 aa11.92□□□□□ -0.5
LSM2-209ENST00000470083 NFATC2Q13469 925 aa11.92□□□□□ -0.5
LSM2-209ENST00000470083 LRP8Q14114 963 aa11.92□□□□□ -0.5
LSM2-209ENST00000470083 ELOAQ14241 798 aaKnown RBP11.92□□□□□ -0.5
LSM2-209ENST00000470083 GJB7Q6PEY0 223 aa11.92□□□□□ -0.5
LSM2-209ENST00000470083 XYLT1Q86Y38 959 aa11.92□□□□□ -0.5
LSM2-209ENST00000470083 RASGRP3Q8IV61 690 aa11.92□□□□□ -0.5
LSM2-209ENST00000470083 TRIM59Q8IWR1 403 aa11.92□□□□□ -0.5
LSM2-209ENST00000470083 IQCKQ8N0W5 287 aa11.92□□□□□ -0.5
LSM2-209ENST00000470083 RTL3Q8N8U3 475 aaKnown RBP11.92□□□□□ -0.5
LSM2-209ENST00000470083 SHC3Q92529 594 aa11.92□□□□□ -0.5
LSM2-209ENST00000470083 C18orf8Q96DM3 657 aa11.92□□□□□ -0.5
LSM2-209ENST00000470083 OR6C1Q96RD1 312 aa11.92□□□□□ -0.5
LSM2-209ENST00000470083 GPR87Q9BY21 358 aa11.92□□□□□ -0.5
LSM2-209ENST00000470083 STN1Q9H668 368 aaKnown RBP11.92□□□□□ -0.5
LSM2-209ENST00000470083 ASF1BQ9NVP2 202 aa11.92□□□□□ -0.5
LSM2-209ENST00000470083 UBA2Q9UBT2 640 aaPredicted RBP11.92□□□□□ -0.5
LSM2-209ENST00000470083 FBN3Q75N90 2809 aa11.92□□□□□ -0.5
LSM2-209ENST00000470083 SPG11Q96JI7 2443 aa11.92□□□□□ -0.5
LSM2-209ENST00000470083 NAV3Q8IVL0 2385 aa11.92□□□□□ -0.5
LSM2-209ENST00000470083 TACC2O95359 2948 aa11.92□□□□□ -0.5
LSM2-209ENST00000470083 TNRC6AQ8NDV7 1962 aaKnown RBP11.92□□□□□ -0.5
LSM2-209ENST00000470083 A8MX80 341 aa11.91□□□□□ -0.5
LSM2-209ENST00000470083 RASA4BC9J798 803 aa11.91□□□□□ -0.5
LSM2-209ENST00000470083 RASA4O43374 803 aa11.91□□□□□ -0.5
LSM2-209ENST00000470083 EML2O95834 649 aa11.91□□□□□ -0.5
LSM2-209ENST00000470083 PLEKP08567 350 aaPredicted RBP11.91□□□□□ -0.5
LSM2-209ENST00000470083 PTPN4P29074 926 aa11.91□□□□□ -0.5
LSM2-209ENST00000470083 CSNK1DP48730 415 aa11.91□□□□□ -0.5
LSM2-209ENST00000470083 MARSP56192 900 aaKnown RBP11.91□□□□□ -0.5
LSM2-209ENST00000470083 ITGA1P56199 1179 aa11.91□□□□□ -0.5
LSM2-209ENST00000470083 YBEYP58557 167 aaPredicted RBP11.91□□□□□ -0.5
LSM2-209ENST00000470083 POLR2LP62875 67 aaKnown RBP11.91□□□□□ -0.5
LSM2-209ENST00000470083 SH3BP2P78314 561 aa11.91□□□□□ -0.5
LSM2-209ENST00000470083 ATP11AP98196 1134 aa11.91□□□□□ -0.5
LSM2-209ENST00000470083 PARP15Q460N3 678 aa11.91□□□□□ -0.5
LSM2-209ENST00000470083 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.91□□□□□ -0.5
LSM2-209ENST00000470083 PYCR3Q53H96 274 aa11.91□□□□□ -0.5
LSM2-209ENST00000470083 SP5Q6BEB4 398 aaPredicted RBP11.91□□□□□ -0.5
LSM2-209ENST00000470083 SMYD5Q6GMV2 418 aa11.91□□□□□ -0.5
LSM2-209ENST00000470083 ARCQ7LC44 396 aa11.91□□□□□ -0.5
LSM2-209ENST00000470083 SYVN1Q86TM6 617 aa11.91□□□□□ -0.5
LSM2-209ENST00000470083 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.91□□□□□ -0.5
LSM2-209ENST00000470083 CCDC34Q96HJ3 373 aa11.91□□□□□ -0.5
LSM2-209ENST00000470083 C9orf72Q96LT7 481 aa11.91□□□□□ -0.5
LSM2-209ENST00000470083 RANBP9Q96S59 729 aa11.91□□□□□ -0.5
LSM2-209ENST00000470083 PLCB1Q9NQ66 1216 aa11.91□□□□□ -0.5
LSM2-209ENST00000470083 B4GALT6Q9UBX8 382 aa11.91□□□□□ -0.5
LSM2-209ENST00000470083 TMEM59LQ9UK28 342 aa11.91□□□□□ -0.5
LSM2-209ENST00000470083 G3BP2Q9UN86 482 aaKnown RBP11.91□□□□□ -0.5
LSM2-209ENST00000470083 PSMA7O14818 248 aa11.9□□□□□ -0.5
LSM2-209ENST00000470083 TOX3O15405 576 aaPredicted RBP11.9□□□□□ -0.5
LSM2-209ENST00000470083 SPAG6O75602 509 aa11.9□□□□□ -0.5
LSM2-209ENST00000470083 ZNF202O95125 648 aa11.9□□□□□ -0.5
LSM2-209ENST00000470083 C9P02748 559 aa11.9□□□□□ -0.5
LSM2-209ENST00000470083 FGF5P12034 268 aa11.9□□□□□ -0.5
LSM2-209ENST00000470083 CDH5P33151 784 aaPredicted RBP11.9□□□□□ -0.5
LSM2-209ENST00000470083 RGRP47804 291 aa11.9□□□□□ -0.5
LSM2-209ENST00000470083 GFERP55789 205 aa11.9□□□□□ -0.5
LSM2-209ENST00000470083 PER3P56645 1201 aa11.9□□□□□ -0.5
LSM2-209ENST00000470083 PNOCQ13519 176 aa11.9□□□□□ -0.5
LSM2-209ENST00000470083 IL10RAQ13651 578 aa11.9□□□□□ -0.5
LSM2-209ENST00000470083 ZRSR2Q15696 482 aaKnown RBP11.9□□□□□ -0.5
LSM2-209ENST00000470083 CNGA3Q16281 694 aa11.9□□□□□ -0.5
LSM2-209ENST00000470083 RAB6CQ53S08 254 aa11.9□□□□□ -0.5
LSM2-209ENST00000470083 RAET1GQ6H3X3 334 aa11.9□□□□□ -0.5
LSM2-209ENST00000470083 TRIM65Q6PJ69 517 aa11.9□□□□□ -0.5
LSM2-209ENST00000470083 DOK6Q6PKX4 331 aa11.9□□□□□ -0.5
LSM2-209ENST00000470083 SRLQ86TD4 932 aa11.9□□□□□ -0.5
LSM2-209ENST00000470083 TMEM35BQ8NCS4 154 aa11.9□□□□□ -0.5
LSM2-209ENST00000470083 FDCSPQ8NFU4 85 aa11.9□□□□□ -0.5
LSM2-209ENST00000470083 DTD2Q96FN9 168 aa11.9□□□□□ -0.5
LSM2-209ENST00000470083 ELMO2Q96JJ3 720 aa11.9□□□□□ -0.5
LSM2-209ENST00000470083 LURAP1Q96LR2 239 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms