RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 S1PR5Q9H228 398 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 CARD9Q9H257 536 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 LINC00597Q9H2U6 94 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 TDP1Q9NUW8 608 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 ETNK2Q9NVF9 386 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 MTMR10Q9NXD2 777 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 SEPT10Q9P0V9 454 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 RNF14Q9UBS8 474 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 CD207Q9UJ71 328 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 CDC42EP3Q9UKI2 254 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 TRHDEQ9UKU6 1024 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 AGO1Q9UL18 857 aaKnown RBP4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 TMPRSS11EQ9UL52 423 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 CCL26Q9Y258 94 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 R3HDM2Q9Y2K5 976 aaKnown RBP4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 VWA7Q9Y334 891 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 NR2E1Q9Y466 385 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 MFHAS1Q9Y4C4 1052 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 ZFP37Q9Y6Q3 630 aaPredicted RBP4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 V9GYY5 206 aaPredicted RBP4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 CLUHO75153 1309 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 MKI67P46013 3256 aaKnown RBP4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 MYO16Q9Y6X6 1858 aa4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 GOLGA6L10A0A0M3HER8 536 aa4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 HEPACAM2A8MVW5 462 aa4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 H0Y626 953 aa4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 CES2O00748 559 aa4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 TBX10O75333 385 aa4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 PRAMEF12O95522 483 aa4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 RHOXF2BP0C7M4 288 aa4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 ZNF888P0CJ79 500 aaPredicted RBP4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 ETS1P14921 441 aa4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 PECAM1P16284 738 aaPredicted RBP4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 ZFXP17010 805 aaPredicted RBP4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 BMP7P18075 431 aa4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 SLC6A4P31645 630 aa4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 COILP38432 576 aaPredicted RBP4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 MTHFRP42898 656 aa4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 IFNAR2P48551 515 aa4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 MEOX1P50221 254 aa4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 SGSHP51688 502 aa4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 AIF1P55008 147 aa4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 SESN2P58004 480 aaPredicted RBP4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 EIF3EP60228 445 aaKnown RBP4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 RPS24P62847 133 aaKnown RBP4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 SLC7A9P82251 487 aa4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 OTUD4Q01804 1114 aaKnown RBP4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 GBE1Q04446 702 aa4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 ITIH3Q06033 890 aa4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 AP1B1Q10567 949 aa4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 ZNF177Q13360 481 aaPredicted RBP4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 EIF4EBP2Q13542 120 aaPredicted RBP4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 DPYSL2Q16555 572 aa4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 ANO4Q32M45 955 aa4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 INAVAQ3KP66 663 aa4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 ALFQ53S48 1182 aa4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 CT83Q5H943 113 aa4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 ZMAT1Q5H9K5 638 aa4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 FAM78AQ5JUQ0 283 aa4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 NADSYN1Q6IA69 706 aa4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 TANGO2Q6ICL3 276 aa4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 KLHDC10Q6PID8 442 aa4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 TMCO3Q6UWJ1 677 aa4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 LEKR1Q6ZMV7 388 aa4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 GPR155Q7Z3F1 870 aa4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 TFAP2DQ7Z6R9 452 aa4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 PRUNE1Q86TP1 453 aa4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 PSTKQ8IV42 348 aaKnown RBP4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 CCDC117Q8IWD4 279 aaPredicted RBP4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 CMIPQ8IY22 773 aa4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 KBTBD2Q8IY47 623 aa4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 YAF2Q8IY57 180 aa4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 CCDC105Q8IYK2 499 aa4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 ZDHHC14Q8IZN3 488 aa4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 CBARPQ8N350 705 aaPredicted RBP4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 CELF5Q8N6W0 485 aaKnown RBP4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 PLD5Q8N7P1 536 aa4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 PRELID2Q8N945 189 aa4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 TDRD5Q8NAT2 981 aaKnown RBP4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 SYT8Q8NBV8 401 aa4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 SPATA4Q8NEY3 305 aa4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 OR14C36Q8NHC7 312 aa4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 ACTL9Q8TC94 416 aa4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 DEPDC1BQ8WUY9 529 aa4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 UBE2Q2Q8WVN8 375 aa4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 P3H4Q92791 437 aa4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 FGF13Q92913 245 aa4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 SMARCD2Q92925 531 aa4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 NKD2Q969F2 451 aaPredicted RBP4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 PABPC5Q96DU9 382 aaKnown RBP4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 MYEOVQ96EZ4 313 aa4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 RAX2Q96IS3 184 aa4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 ZFYVE19Q96K21 471 aa4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 RPGRIP1Q96KN7 1286 aa4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 C1orf74Q96LT6 269 aa4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 GUCD1Q96NT3 240 aa4.16□□□□□ -1.74
TMEM39A-204ENST00000468545 MYADMQ96S97 322 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms