RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 OLAHQ9NV23 265 aa15.77■□□□□ 0.12
TSPAN4-211ENST00000468468 MAP10Q9P2G4 905 aa15.77■□□□□ 0.12
TSPAN4-211ENST00000468468 UXTQ9UBK9 157 aaPredicted RBP15.77■□□□□ 0.12
TSPAN4-211ENST00000468468 MIA3Q5JRA6 1907 aa15.77■□□□□ 0.12
TSPAN4-211ENST00000468468 M0QZQ0 153 aa15.77■□□□□ 0.11
TSPAN4-211ENST00000468468 SOCS2O14508 198 aa15.77■□□□□ 0.11
TSPAN4-211ENST00000468468 SIX3O95343 332 aaPredicted RBP15.77■□□□□ 0.11
TSPAN4-211ENST00000468468 NDST2P52849 883 aa15.77■□□□□ 0.11
TSPAN4-211ENST00000468468 ABTB1Q969K4 478 aaPredicted RBP15.77■□□□□ 0.11
TSPAN4-211ENST00000468468 PSMG2Q969U7 264 aa15.77■□□□□ 0.11
TSPAN4-211ENST00000468468 TMIGD2Q96BF3 282 aa15.77■□□□□ 0.11
TSPAN4-211ENST00000468468 RMND5BQ96G75 393 aaPredicted RBP15.77■□□□□ 0.11
TSPAN4-211ENST00000468468 C1orf74Q96LT6 269 aa15.77■□□□□ 0.11
TSPAN4-211ENST00000468468 TBATAQ96M53 351 aa15.77■□□□□ 0.11
TSPAN4-211ENST00000468468 ARMC1Q9NVT9 282 aa15.77■□□□□ 0.11
TSPAN4-211ENST00000468468 LRRC14BA6NHZ5 514 aa15.76■□□□□ 0.11
TSPAN4-211ENST00000468468 SAC3D1A6NKF1 404 aa15.76■□□□□ 0.11
TSPAN4-211ENST00000468468 BBIP1A8MTZ0 92 aa15.76■□□□□ 0.11
TSPAN4-211ENST00000468468 NME4O00746 187 aa15.76■□□□□ 0.11
TSPAN4-211ENST00000468468 TRMUO75648 421 aaKnown RBP15.76■□□□□ 0.11
TSPAN4-211ENST00000468468 CNTN5O94779 1100 aa15.76■□□□□ 0.11
TSPAN4-211ENST00000468468 CDK14O94921 469 aa15.76■□□□□ 0.11
TSPAN4-211ENST00000468468 OR4Q2P0C623 313 aa15.76■□□□□ 0.11
TSPAN4-211ENST00000468468 CD1DP15813 335 aa15.76■□□□□ 0.11
TSPAN4-211ENST00000468468 NFKB2Q00653 900 aa15.76■□□□□ 0.11
TSPAN4-211ENST00000468468 SP3Q02447 781 aa15.76■□□□□ 0.11
TSPAN4-211ENST00000468468 SFSWAPQ12872 951 aaKnown RBP15.76■□□□□ 0.11
TSPAN4-211ENST00000468468 VPS26BQ4G0F5 336 aa15.76■□□□□ 0.11
TSPAN4-211ENST00000468468 PPP4R4Q6NUP7 873 aa15.76■□□□□ 0.11
TSPAN4-211ENST00000468468 ERMP1Q7Z2K6 904 aa15.76■□□□□ 0.11
TSPAN4-211ENST00000468468 ALDH16A1Q8IZ83 802 aa15.76■□□□□ 0.11
TSPAN4-211ENST00000468468 TCF12Q99081 682 aa15.76■□□□□ 0.11
TSPAN4-211ENST00000468468 DUS2Q9NX74 493 aaKnown RBP15.76■□□□□ 0.11
TSPAN4-211ENST00000468468 FNIP2Q9P278 1114 aa15.76■□□□□ 0.11
TSPAN4-211ENST00000468468 AURKCQ9UQB9 309 aa15.76■□□□□ 0.11
TSPAN4-211ENST00000468468 PIP5K1BO14986 540 aa15.76■□□□□ 0.11
TSPAN4-211ENST00000468468 B4GALT3O60512 393 aa15.76■□□□□ 0.11
TSPAN4-211ENST00000468468 SLC2A3P11169 496 aa15.76■□□□□ 0.11
TSPAN4-211ENST00000468468 BMP2P12643 396 aa15.76■□□□□ 0.11
TSPAN4-211ENST00000468468 CST5P28325 142 aaPredicted RBP15.76■□□□□ 0.11
TSPAN4-211ENST00000468468 ETFBP38117 255 aa15.76■□□□□ 0.11
TSPAN4-211ENST00000468468 TUSC3Q13454 348 aa15.76■□□□□ 0.11
TSPAN4-211ENST00000468468 GRB7Q14451 532 aa15.76■□□□□ 0.11
TSPAN4-211ENST00000468468 ALFQ53S48 1182 aa15.76■□□□□ 0.11
TSPAN4-211ENST00000468468 DUS1LQ6P1R4 473 aaKnown RBP15.76■□□□□ 0.11
TSPAN4-211ENST00000468468 ZNF549Q6P9A3 640 aa15.76■□□□□ 0.11
TSPAN4-211ENST00000468468 DDIASQ8IXT1 998 aa15.76■□□□□ 0.11
TSPAN4-211ENST00000468468 PCSK9Q8NBP7 692 aaKnown RBP15.76■□□□□ 0.11
TSPAN4-211ENST00000468468 TWIST2Q8WVJ9 160 aa15.76■□□□□ 0.11
TSPAN4-211ENST00000468468 GPATCH1Q9BRR8 931 aaKnown RBP15.76■□□□□ 0.11
TSPAN4-211ENST00000468468 ANKRD60Q9BZ19 345 aa15.76■□□□□ 0.11
TSPAN4-211ENST00000468468 ZYG11BQ9C0D3 744 aa15.76■□□□□ 0.11
TSPAN4-211ENST00000468468 POLR3BQ9NW08 1133 aaPredicted RBP15.76■□□□□ 0.11
TSPAN4-211ENST00000468468 NDUFAF1Q9Y375 327 aa15.76■□□□□ 0.11
TSPAN4-211ENST00000468468 C9JVG2 144 aa15.75■□□□□ 0.11
TSPAN4-211ENST00000468468 LDB2O43679 373 aa15.75■□□□□ 0.11
TSPAN4-211ENST00000468468 ALDH1A1P00352 501 aa15.75■□□□□ 0.11
TSPAN4-211ENST00000468468 RHOQP17081 205 aa15.75■□□□□ 0.11
TSPAN4-211ENST00000468468 FDXRP22570 491 aa15.75■□□□□ 0.11
TSPAN4-211ENST00000468468 ACLYP53396 1101 aa15.75■□□□□ 0.11
TSPAN4-211ENST00000468468 FOXA1P55317 472 aa15.75■□□□□ 0.11
TSPAN4-211ENST00000468468 PTPRCAPQ14761 206 aa15.75■□□□□ 0.11
TSPAN4-211ENST00000468468 PFKFB4Q16877 469 aa15.75■□□□□ 0.11
TSPAN4-211ENST00000468468 NHSL2Q5HYW2 709 aa15.75■□□□□ 0.11
TSPAN4-211ENST00000468468 TBCELQ5QJ74 424 aa15.75■□□□□ 0.11
TSPAN4-211ENST00000468468 SDHAF4Q5VUM1 108 aa15.75■□□□□ 0.11
TSPAN4-211ENST00000468468 RAB44Q7Z6P3 723 aaPredicted RBP15.75■□□□□ 0.11
TSPAN4-211ENST00000468468 ZUFSPQ96AP4 578 aa15.75■□□□□ 0.11
TSPAN4-211ENST00000468468 HOPXQ9BPY8 73 aaPredicted RBP15.75■□□□□ 0.11
TSPAN4-211ENST00000468468 CCM2LQ9NUG4 571 aaPredicted RBP15.75■□□□□ 0.11
TSPAN4-211ENST00000468468 RSL24D1Q9UHA3 163 aaKnown RBP15.75■□□□□ 0.11
TSPAN4-211ENST00000468468 EGFL7Q9UHF1 273 aa15.75■□□□□ 0.11
TSPAN4-211ENST00000468468 TLR6Q9Y2C9 796 aa15.75■□□□□ 0.11
TSPAN4-211ENST00000468468 UBXN8O00124 270 aa15.75■□□□□ 0.11
TSPAN4-211ENST00000468468 AZIN1O14977 448 aa15.75■□□□□ 0.11
TSPAN4-211ENST00000468468 ANGPT2O15123 496 aa15.75■□□□□ 0.11
TSPAN4-211ENST00000468468 GLP2RO95838 553 aa15.75■□□□□ 0.11
TSPAN4-211ENST00000468468 RPLP2P05387 115 aaKnown RBP15.75■□□□□ 0.11
TSPAN4-211ENST00000468468 CAPN3P20807 821 aa15.75■□□□□ 0.11
TSPAN4-211ENST00000468468 ALDH3B2P48448 385 aa15.75■□□□□ 0.11
TSPAN4-211ENST00000468468 PLOD1Q02809 727 aaPredicted RBP15.75■□□□□ 0.11
TSPAN4-211ENST00000468468 IRAK1BP1Q5VVH5 260 aa15.75■□□□□ 0.11
TSPAN4-211ENST00000468468 SPPL2CQ8IUH8 684 aa15.75■□□□□ 0.11
TSPAN4-211ENST00000468468 MIER2Q8N344 545 aa15.75■□□□□ 0.11
TSPAN4-211ENST00000468468 FAM47BQ8NA70 645 aa15.75■□□□□ 0.11
TSPAN4-211ENST00000468468 ARRDC2Q8TBH0 407 aa15.75■□□□□ 0.11
TSPAN4-211ENST00000468468 DIS3LQ8TF46 1054 aaKnown RBP15.75■□□□□ 0.11
TSPAN4-211ENST00000468468 PRDM5Q9NQX1 630 aaPredicted RBP15.75■□□□□ 0.11
TSPAN4-211ENST00000468468 GOT2P00505 430 aaKnown RBP15.75■□□□□ 0.11
TSPAN4-211ENST00000468468 FGF4P08620 206 aa15.75■□□□□ 0.11
TSPAN4-211ENST00000468468 ATXN1LP0C7T5 689 aaKnown RBP15.75■□□□□ 0.11
TSPAN4-211ENST00000468468 TBX4P57082 545 aa15.75■□□□□ 0.11
TSPAN4-211ENST00000468468 CAPRIN1Q14444 709 aaKnown RBP15.75■□□□□ 0.11
TSPAN4-211ENST00000468468 OR4D1Q15615 310 aa15.75■□□□□ 0.11
TSPAN4-211ENST00000468468 MS4A13Q5J8X5 152 aa15.75■□□□□ 0.11
TSPAN4-211ENST00000468468 RTN4RL1Q86UN2 441 aaPredicted RBP15.75■□□□□ 0.11
TSPAN4-211ENST00000468468 SLC15A3Q8IY34 581 aa15.75■□□□□ 0.11
TSPAN4-211ENST00000468468 ZNF683Q8IZ20 524 aa15.75■□□□□ 0.11
TSPAN4-211ENST00000468468 PGBD5Q8N414 524 aa15.75■□□□□ 0.11
TSPAN4-211ENST00000468468 NSUN5Q96P11 429 aaKnown RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms