RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 SKILP12757 684 aa17.21■□□□□ 0.35
TRIM56-203ENST00000467847 CTPS1P17812 591 aa17.21■□□□□ 0.35
TRIM56-203ENST00000467847 TEAD1P28347 426 aa17.21■□□□□ 0.35
TRIM56-203ENST00000467847 CD1CP29017 333 aa17.21■□□□□ 0.35
TRIM56-203ENST00000467847 SERPINB6P35237 376 aa17.21■□□□□ 0.35
TRIM56-203ENST00000467847 ANP32AP39687 249 aaKnown RBP17.21■□□□□ 0.35
TRIM56-203ENST00000467847 ADCY8P40145 1251 aa17.21■□□□□ 0.35
TRIM56-203ENST00000467847 GPR1P46091 355 aa17.21■□□□□ 0.35
TRIM56-203ENST00000467847 ZNF574Q6ZN55 896 aaPredicted RBP17.21■□□□□ 0.35
TRIM56-203ENST00000467847 CCDC74BQ96LY2 380 aa17.21■□□□□ 0.35
TRIM56-203ENST00000467847 TRIM4Q9C037 500 aa17.21■□□□□ 0.35
TRIM56-203ENST00000467847 CDH19Q9H159 772 aa17.21■□□□□ 0.35
TRIM56-203ENST00000467847 ISCUQ9H1K1 167 aa17.21■□□□□ 0.35
TRIM56-203ENST00000467847 IL17BQ9UHF5 180 aa17.21■□□□□ 0.35
TRIM56-203ENST00000467847 CD84Q9UIB8 345 aa17.21■□□□□ 0.35
TRIM56-203ENST00000467847 ST14Q9Y5Y6 855 aa17.21■□□□□ 0.35
TRIM56-203ENST00000467847 A0A0U1RQS6 177 aa17.2■□□□□ 0.34
TRIM56-203ENST00000467847 STMND1H3BQB6 276 aa17.2■□□□□ 0.34
TRIM56-203ENST00000467847 MBD3O95983 291 aa17.2■□□□□ 0.34
TRIM56-203ENST00000467847 FAM87AP0C7U9 286 aa17.2■□□□□ 0.34
TRIM56-203ENST00000467847 ACTR1BP42025 376 aa17.2■□□□□ 0.34
TRIM56-203ENST00000467847 ACTR1AP61163 376 aa17.2■□□□□ 0.34
TRIM56-203ENST00000467847 DPTQ07507 201 aa17.2■□□□□ 0.34
TRIM56-203ENST00000467847 PIGHQ14442 188 aaPredicted RBP17.2■□□□□ 0.34
TRIM56-203ENST00000467847 NKAIN2Q5VXU1 208 aa17.2■□□□□ 0.34
TRIM56-203ENST00000467847 TXNRD3NBQ6F5E7 133 aa17.2■□□□□ 0.34
TRIM56-203ENST00000467847 ADAMTSL4Q6UY14 1074 aa17.2■□□□□ 0.34
TRIM56-203ENST00000467847 TECPR1Q7Z6L1 1165 aa17.2■□□□□ 0.34
TRIM56-203ENST00000467847 NAGSQ8N159 534 aa17.2■□□□□ 0.34
TRIM56-203ENST00000467847 NDUFAF2Q8N183 169 aa17.2■□□□□ 0.34
TRIM56-203ENST00000467847 TEKT4Q8WW24 435 aa17.2■□□□□ 0.34
TRIM56-203ENST00000467847 AP2M1Q96CW1 435 aa17.2■□□□□ 0.34
TRIM56-203ENST00000467847 BPIFA3Q9BQP9 254 aa17.2■□□□□ 0.34
TRIM56-203ENST00000467847 PCDH18Q9HCL0 1135 aa17.2■□□□□ 0.34
TRIM56-203ENST00000467847 NT5MQ9NPB1 228 aa17.2■□□□□ 0.34
TRIM56-203ENST00000467847 TMEM98Q9Y2Y6 226 aa17.2■□□□□ 0.34
TRIM56-203ENST00000467847 SMTNL1A8MU46 457 aa17.19■□□□□ 0.34
TRIM56-203ENST00000467847 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.19■□□□□ 0.34
TRIM56-203ENST00000467847 PPM1DO15297 605 aa17.19■□□□□ 0.34
TRIM56-203ENST00000467847 WT1P19544 449 aaPredicted RBP17.19■□□□□ 0.34
TRIM56-203ENST00000467847 LIMK2P53671 638 aa17.19■□□□□ 0.34
TRIM56-203ENST00000467847 CYP4F2P78329 520 aa17.19■□□□□ 0.34
TRIM56-203ENST00000467847 ITKQ08881 620 aa17.19■□□□□ 0.34
TRIM56-203ENST00000467847 KRT81Q14533 505 aa17.19■□□□□ 0.34
TRIM56-203ENST00000467847 LRRC66Q68CR7 880 aa17.19■□□□□ 0.34
TRIM56-203ENST00000467847 RFLNAQ6ZTI6 216 aa17.19■□□□□ 0.34
TRIM56-203ENST00000467847 OR4D9Q8NGE8 314 aa17.19■□□□□ 0.34
TRIM56-203ENST00000467847 PIH1D2Q8WWB5 315 aa17.19■□□□□ 0.34
TRIM56-203ENST00000467847 JPH3Q8WXH2 748 aaPredicted RBP17.19■□□□□ 0.34
TRIM56-203ENST00000467847 SCARF2Q96GP6 870 aaPredicted RBP17.19■□□□□ 0.34
TRIM56-203ENST00000467847 OR2M4Q96R27 311 aa17.19■□□□□ 0.34
TRIM56-203ENST00000467847 TAAR9Q96RI9 348 aa17.19■□□□□ 0.34
TRIM56-203ENST00000467847 SEMA3CQ99985 751 aa17.19■□□□□ 0.34
TRIM56-203ENST00000467847 ZMYND15Q9H091 742 aa17.19■□□□□ 0.34
TRIM56-203ENST00000467847 ABCG8Q9H221 673 aa17.19■□□□□ 0.34
TRIM56-203ENST00000467847 KCNK4Q9NYG8 393 aa17.19■□□□□ 0.34
TRIM56-203ENST00000467847 PPIL1Q9Y3C6 166 aa17.19■□□□□ 0.34
TRIM56-203ENST00000467847 PLEKHM1Q9Y4G2 1056 aa17.19■□□□□ 0.34
TRIM56-203ENST00000467847 A0A1B0GTH6 734 aa17.18■□□□□ 0.34
TRIM56-203ENST00000467847 SOD1P00441 154 aa17.18■□□□□ 0.34
TRIM56-203ENST00000467847 PDHA1P08559 390 aa17.18■□□□□ 0.34
TRIM56-203ENST00000467847 FGF3P11487 239 aaPredicted RBP17.18■□□□□ 0.34
TRIM56-203ENST00000467847 SFTPCP11686 197 aa17.18■□□□□ 0.34
TRIM56-203ENST00000467847 ATP1A2P50993 1020 aa17.18■□□□□ 0.34
TRIM56-203ENST00000467847 SLC25A11Q02978 314 aaKnown RBP17.18■□□□□ 0.34
TRIM56-203ENST00000467847 SRSF1Q07955 248 aaKnown RBP eCLIP17.18■□□□□ 0.34
TRIM56-203ENST00000467847 TRA2AQ13595 282 aaKnown RBP eCLIP17.18■□□□□ 0.34
TRIM56-203ENST00000467847 TBR1Q16650 682 aa17.18■□□□□ 0.34
TRIM56-203ENST00000467847 TDRD12Q587J7 1177 aaKnown RBP17.18■□□□□ 0.34
TRIM56-203ENST00000467847 MARK2Q7KZI7 788 aaKnown RBP17.18■□□□□ 0.34
TRIM56-203ENST00000467847 TRIM74Q86UV6 250 aa17.18■□□□□ 0.34
TRIM56-203ENST00000467847 LRRC49Q8IUZ0 686 aa17.18■□□□□ 0.34
TRIM56-203ENST00000467847 TEX26Q8N6G2 289 aa17.18■□□□□ 0.34
TRIM56-203ENST00000467847 NIPA2Q8N8Q9 360 aa17.18■□□□□ 0.34
TRIM56-203ENST00000467847 AGBL5Q8NDL9 886 aa17.18■□□□□ 0.34
TRIM56-203ENST00000467847 CCDC112Q8NEF3 446 aa17.18■□□□□ 0.34
TRIM56-203ENST00000467847 SCAMP4Q969E2 229 aa17.18■□□□□ 0.34
TRIM56-203ENST00000467847 PMEPA1Q969W9 287 aa17.18■□□□□ 0.34
TRIM56-203ENST00000467847 BTBD6Q96KE9 485 aa17.18■□□□□ 0.34
TRIM56-203ENST00000467847 NAP1L5Q96NT1 182 aaPredicted RBP17.18■□□□□ 0.34
TRIM56-203ENST00000467847 SMIM14Q96QK8 99 aa17.18■□□□□ 0.34
TRIM56-203ENST00000467847 POLR1EQ9GZS1 481 aaKnown RBP17.18■□□□□ 0.34
TRIM56-203ENST00000467847 STARD5Q9NSY2 213 aa17.18■□□□□ 0.34
TRIM56-203ENST00000467847 IGHV1OR21-1A0A087WYE8 117 aa17.17■□□□□ 0.34
TRIM56-203ENST00000467847 NTRK1P04629 796 aa17.17■□□□□ 0.34
TRIM56-203ENST00000467847 THRAP10827 490 aa17.17■□□□□ 0.34
TRIM56-203ENST00000467847 MPSTP25325 297 aa17.17■□□□□ 0.34
TRIM56-203ENST00000467847 CSF2RBP32927 897 aa17.17■□□□□ 0.34
TRIM56-203ENST00000467847 CSTF2P33240 577 aaKnown RBP eCLIP17.17■□□□□ 0.34
TRIM56-203ENST00000467847 PPM1FP49593 454 aaPredicted RBP17.17■□□□□ 0.34
TRIM56-203ENST00000467847 EPHB1P54762 984 aa17.17■□□□□ 0.34
TRIM56-203ENST00000467847 PTSQ03393 145 aa17.17■□□□□ 0.34
TRIM56-203ENST00000467847 SQSTM1Q13501 440 aa17.17■□□□□ 0.34
TRIM56-203ENST00000467847 PYCR3Q53H96 274 aa17.17■□□□□ 0.34
TRIM56-203ENST00000467847 GALNT13Q8IUC8 556 aa17.17■□□□□ 0.34
TRIM56-203ENST00000467847 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.17■□□□□ 0.34
TRIM56-203ENST00000467847 ART4Q93070 314 aa17.17■□□□□ 0.34
TRIM56-203ENST00000467847 DPYSL5Q9BPU6 564 aa17.17■□□□□ 0.34
TRIM56-203ENST00000467847 THAP2Q9H0W7 228 aa17.17■□□□□ 0.34
TRIM56-203ENST00000467847 RCOR3Q9P2K3 495 aaPredicted RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms