RNA–Protein interactions for RNA: ENST00000466416.1

ABCF3-205, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-205ENST00000466416 PRCPP42785 496 aa9.16□□□□□ -0.94
ABCF3-205ENST00000466416 SYKP43405 635 aa9.16□□□□□ -0.94
ABCF3-205ENST00000466416 RPS15P62841 145 aaKnown RBP9.16□□□□□ -0.94
ABCF3-205ENST00000466416 CDK3Q00526 305 aa9.16□□□□□ -0.94
ABCF3-205ENST00000466416 CHAF1BQ13112 559 aa9.16□□□□□ -0.94
ABCF3-205ENST00000466416 LRP8Q14114 963 aa9.16□□□□□ -0.94
ABCF3-205ENST00000466416 CYTH1Q15438 398 aa9.16□□□□□ -0.94
ABCF3-205ENST00000466416 PLEKHN1Q494U1 663 aaPredicted RBP9.16□□□□□ -0.94
ABCF3-205ENST00000466416 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.16□□□□□ -0.94
ABCF3-205ENST00000466416 PTPN20Q4JDL3 420 aa9.16□□□□□ -0.94
ABCF3-205ENST00000466416 COBLL1Q53SF7 1204 aa9.16□□□□□ -0.94
ABCF3-205ENST00000466416 SMYD5Q6GMV2 418 aa9.16□□□□□ -0.94
ABCF3-205ENST00000466416 CYB5D1Q6P9G0 228 aa9.16□□□□□ -0.94
ABCF3-205ENST00000466416 SPNS3Q6ZMD2 512 aa9.16□□□□□ -0.94
ABCF3-205ENST00000466416 DPPA4Q7L190 304 aa9.16□□□□□ -0.94
ABCF3-205ENST00000466416 BNIPLQ7Z465 357 aa9.16□□□□□ -0.94
ABCF3-205ENST00000466416 FAM131BQ86XD5 332 aa9.16□□□□□ -0.94
ABCF3-205ENST00000466416 ZSWIM9Q86XI8 627 aa9.16□□□□□ -0.94
ABCF3-205ENST00000466416 XYLT1Q86Y38 959 aa9.16□□□□□ -0.94
ABCF3-205ENST00000466416 CAMK1DQ8IU85 385 aa9.16□□□□□ -0.94
ABCF3-205ENST00000466416 PASD1Q8IV76 773 aa9.16□□□□□ -0.94
ABCF3-205ENST00000466416 PELI3Q8N2H9 469 aa9.16□□□□□ -0.94
ABCF3-205ENST00000466416 CISD2Q8N5K1 135 aaKnown RBP9.16□□□□□ -0.94
ABCF3-205ENST00000466416 FAM81BQ96LP2 452 aa9.16□□□□□ -0.94
ABCF3-205ENST00000466416 C9orf72Q96LT7 481 aa9.16□□□□□ -0.94
ABCF3-205ENST00000466416 OR2M4Q96R27 311 aa9.16□□□□□ -0.94
ABCF3-205ENST00000466416 OR6C1Q96RD1 312 aa9.16□□□□□ -0.94
ABCF3-205ENST00000466416 BARD1Q99728 777 aaKnown RBP9.16□□□□□ -0.94
ABCF3-205ENST00000466416 BRD8Q9H0E9 1235 aa9.16□□□□□ -0.94
ABCF3-205ENST00000466416 LHX3Q9UBR4 397 aa9.16□□□□□ -0.94
ABCF3-205ENST00000466416 SPG11Q96JI7 2443 aa9.16□□□□□ -0.94
ABCF3-205ENST00000466416 MN1Q10571 1320 aaPredicted RBP9.15□□□□□ -0.94
ABCF3-205ENST00000466416 A0A1B0GTL3 188 aa9.15□□□□□ -0.94
ABCF3-205ENST00000466416 LRRTM2O43300 516 aa9.15□□□□□ -0.94
ABCF3-205ENST00000466416 C9P02748 559 aa9.15□□□□□ -0.94
ABCF3-205ENST00000466416 SERPINA4P29622 427 aa9.15□□□□□ -0.94
ABCF3-205ENST00000466416 ADRA1BP35368 520 aa9.15□□□□□ -0.94
ABCF3-205ENST00000466416 KRT9P35527 623 aa9.15□□□□□ -0.94
ABCF3-205ENST00000466416 CSNK1DP48730 415 aa9.15□□□□□ -0.94
ABCF3-205ENST00000466416 POLD2P49005 469 aa9.15□□□□□ -0.94
ABCF3-205ENST00000466416 YBEYP58557 167 aaPredicted RBP9.15□□□□□ -0.94
ABCF3-205ENST00000466416 CDK18Q07002 472 aa9.15□□□□□ -0.94
ABCF3-205ENST00000466416 NFATC2Q13469 925 aa9.15□□□□□ -0.94
ABCF3-205ENST00000466416 TESK1Q15569 626 aa9.15□□□□□ -0.94
ABCF3-205ENST00000466416 FOXD4L6Q3SYB3 417 aaPredicted RBP9.15□□□□□ -0.94
ABCF3-205ENST00000466416 FOXD4L3Q6VB84 417 aaPredicted RBP9.15□□□□□ -0.94
ABCF3-205ENST00000466416 KRBA2Q6ZNG9 492 aa9.15□□□□□ -0.94
ABCF3-205ENST00000466416 SLC9B2Q86UD5 537 aa9.15□□□□□ -0.94
ABCF3-205ENST00000466416 PPP1R3BQ86XI6 285 aa9.15□□□□□ -0.94
ABCF3-205ENST00000466416 NETO2Q8NC67 525 aa9.15□□□□□ -0.94
ABCF3-205ENST00000466416 ST6GALNAC3Q8NDV1 305 aa9.15□□□□□ -0.94
ABCF3-205ENST00000466416 FDCSPQ8NFU4 85 aa9.15□□□□□ -0.94
ABCF3-205ENST00000466416 PTCD2Q8WV60 388 aaKnown RBP9.15□□□□□ -0.94
ABCF3-205ENST00000466416 ECHDC3Q96DC8 303 aa9.15□□□□□ -0.94
ABCF3-205ENST00000466416 TBC1D31Q96DN5 1066 aa9.15□□□□□ -0.94
ABCF3-205ENST00000466416 NUS1Q96E22 293 aa9.15□□□□□ -0.94
ABCF3-205ENST00000466416 EXOC2Q96KP1 924 aa9.15□□□□□ -0.94
ABCF3-205ENST00000466416 COQ10AQ96MF6 247 aa9.15□□□□□ -0.94
ABCF3-205ENST00000466416 CEP63Q96MT8 703 aa9.15□□□□□ -0.94
ABCF3-205ENST00000466416 FCRL4Q96PJ5 515 aa9.15□□□□□ -0.94
ABCF3-205ENST00000466416 SMAD5Q99717 465 aaKnown RBP9.15□□□□□ -0.94
ABCF3-205ENST00000466416 ATP13A3Q9H7F0 1226 aa9.15□□□□□ -0.94
ABCF3-205ENST00000466416 C5AR2Q9P296 337 aa9.15□□□□□ -0.94
ABCF3-205ENST00000466416 FARSAQ9Y285 508 aaKnown RBP9.15□□□□□ -0.94
ABCF3-205ENST00000466416 PLEKHM1Q9Y4G2 1056 aa9.15□□□□□ -0.94
ABCF3-205ENST00000466416 COPG1Q9Y678 874 aaKnown RBP9.15□□□□□ -0.94
ABCF3-205ENST00000466416 ANKRD36A6QL64 1941 aa9.15□□□□□ -0.95
ABCF3-205ENST00000466416 AKAP9Q99996 3911 aa9.14□□□□□ -0.95
ABCF3-205ENST00000466416 LRIG2O94898 1065 aa9.14□□□□□ -0.95
ABCF3-205ENST00000466416 HSP90AA1P07900 732 aaKnown RBP9.14□□□□□ -0.95
ABCF3-205ENST00000466416 PLEKP08567 350 aaPredicted RBP9.14□□□□□ -0.95
ABCF3-205ENST00000466416 SLC2A4P14672 509 aa9.14□□□□□ -0.95
ABCF3-205ENST00000466416 USP8P40818 1118 aa9.14□□□□□ -0.95
ABCF3-205ENST00000466416 MAPK9P45984 424 aa9.14□□□□□ -0.95
ABCF3-205ENST00000466416 GABRB2P47870 512 aa9.14□□□□□ -0.95
ABCF3-205ENST00000466416 PMS1P54277 932 aaKnown RBP9.14□□□□□ -0.95
ABCF3-205ENST00000466416 SH3BP2P78314 561 aa9.14□□□□□ -0.95
ABCF3-205ENST00000466416 PTK2Q05397 1052 aa9.14□□□□□ -0.95
ABCF3-205ENST00000466416 PARP15Q460N3 678 aa9.14□□□□□ -0.95
ABCF3-205ENST00000466416 CCDC40Q4G0X9 1142 aa9.14□□□□□ -0.95
ABCF3-205ENST00000466416 PYCR3Q53H96 274 aa9.14□□□□□ -0.95
ABCF3-205ENST00000466416 FAM102AQ5T9C2 384 aaPredicted RBP9.14□□□□□ -0.95
ABCF3-205ENST00000466416 IYDQ6PHW0 289 aa9.14□□□□□ -0.95
ABCF3-205ENST00000466416 ARCQ7LC44 396 aa9.14□□□□□ -0.95
ABCF3-205ENST00000466416 SRLQ86TD4 932 aa9.14□□□□□ -0.95
ABCF3-205ENST00000466416 LZTR1Q8N653 840 aa9.14□□□□□ -0.95
ABCF3-205ENST00000466416 PAF1Q8N7H5 531 aa9.14□□□□□ -0.95
ABCF3-205ENST00000466416 GLIS1Q8NBF1 620 aa9.14□□□□□ -0.95
ABCF3-205ENST00000466416 AVL9Q8NBF6 648 aa9.14□□□□□ -0.95
ABCF3-205ENST00000466416 C18orf8Q96DM3 657 aa9.14□□□□□ -0.95
ABCF3-205ENST00000466416 CCDC34Q96HJ3 373 aa9.14□□□□□ -0.95
ABCF3-205ENST00000466416 NUDT9Q9BW91 350 aa9.14□□□□□ -0.95
ABCF3-205ENST00000466416 KLC2Q9H0B6 622 aa9.14□□□□□ -0.95
ABCF3-205ENST00000466416 NOL6Q9H6R4 1146 aaKnown RBP9.14□□□□□ -0.95
ABCF3-205ENST00000466416 LATS2Q9NRM7 1088 aa9.14□□□□□ -0.95
ABCF3-205ENST00000466416 AGPAT4Q9NRZ5 378 aa9.14□□□□□ -0.95
ABCF3-205ENST00000466416 RMND1Q9NWS8 449 aa9.14□□□□□ -0.95
ABCF3-205ENST00000466416 GPR83Q9NYM4 423 aa9.14□□□□□ -0.95
ABCF3-205ENST00000466416 UBA2Q9UBT2 640 aaPredicted RBP9.14□□□□□ -0.95
ABCF3-205ENST00000466416 B3GNT3Q9Y2A9 372 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms