RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 LRRC8BQ6P9F7 803 aa5.55□□□□□ -1.52
VPS41-211ENST00000466017 RFWD3Q6PCD5 774 aa5.55□□□□□ -1.52
VPS41-211ENST00000466017 FBXO38Q6PIJ6 1188 aa5.55□□□□□ -1.52
VPS41-211ENST00000466017 ARHGEF18Q6ZSZ5 1173 aa5.55□□□□□ -1.52
VPS41-211ENST00000466017 MTSS1LQ765P7 747 aa5.55□□□□□ -1.52
VPS41-211ENST00000466017 CROCCP2Q86T23 111 aa5.55□□□□□ -1.52
VPS41-211ENST00000466017 TMEFF1Q8IYR6 380 aa5.55□□□□□ -1.52
VPS41-211ENST00000466017 IQCKQ8N0W5 287 aa5.55□□□□□ -1.52
VPS41-211ENST00000466017 CFAP52Q8N1V2 620 aa5.55□□□□□ -1.52
VPS41-211ENST00000466017 KDM1BQ8NB78 822 aa5.55□□□□□ -1.52
VPS41-211ENST00000466017 SMRP1Q8NCR6 262 aa5.55□□□□□ -1.52
VPS41-211ENST00000466017 OR52K2Q8NGK3 314 aa5.55□□□□□ -1.52
VPS41-211ENST00000466017 CCDC110Q8TBZ0 833 aa5.55□□□□□ -1.52
VPS41-211ENST00000466017 WFIKKN2Q8TEU8 576 aa5.55□□□□□ -1.52
VPS41-211ENST00000466017 DDI1Q8WTU0 396 aa5.55□□□□□ -1.52
VPS41-211ENST00000466017 IFT81Q8WYA0 676 aa5.55□□□□□ -1.52
VPS41-211ENST00000466017 PRCCQ92733 491 aaPredicted RBP5.55□□□□□ -1.52
VPS41-211ENST00000466017 TTC17Q96AE7 1141 aa5.55□□□□□ -1.52
VPS41-211ENST00000466017 ISG20Q96AZ6 181 aaKnown RBP5.55□□□□□ -1.52
VPS41-211ENST00000466017 HMCESQ96FZ2 354 aa5.55□□□□□ -1.52
VPS41-211ENST00000466017 CELF6Q96J87 481 aaKnown RBP5.55□□□□□ -1.52
VPS41-211ENST00000466017 LRRC3BQ96PB8 259 aa5.55□□□□□ -1.52
VPS41-211ENST00000466017 PSKH2Q96QS6 385 aa5.55□□□□□ -1.52
VPS41-211ENST00000466017 FAM118BQ9BPY3 351 aa5.55□□□□□ -1.52
VPS41-211ENST00000466017 C19orf43Q9BQ61 176 aa5.55□□□□□ -1.52
VPS41-211ENST00000466017 SYT3Q9BQG1 590 aa5.55□□□□□ -1.52
VPS41-211ENST00000466017 MGME1Q9BQP7 344 aa5.55□□□□□ -1.52
VPS41-211ENST00000466017 FEM1AQ9BSK4 669 aa5.55□□□□□ -1.52
VPS41-211ENST00000466017 NAT9Q9BTE0 207 aa5.55□□□□□ -1.52
VPS41-211ENST00000466017 TMEM109Q9BVC6 243 aa5.55□□□□□ -1.52
VPS41-211ENST00000466017 GBA3Q9H227 469 aa5.55□□□□□ -1.52
VPS41-211ENST00000466017 NEUROG2Q9H2A3 272 aa5.55□□□□□ -1.52
VPS41-211ENST00000466017 DPH5Q9H2P9 285 aa5.55□□□□□ -1.52
VPS41-211ENST00000466017 LINC00597Q9H2U6 94 aa5.55□□□□□ -1.52
VPS41-211ENST00000466017 GLOD4Q9HC38 313 aa5.55□□□□□ -1.52
VPS41-211ENST00000466017 ABCB8Q9NUT2 735 aa5.55□□□□□ -1.52
VPS41-211ENST00000466017 RBM22Q9NW64 420 aaKnown RBP eCLIP5.55□□□□□ -1.52
VPS41-211ENST00000466017 CCL26Q9Y258 94 aa5.55□□□□□ -1.52
VPS41-211ENST00000466017 A0A0D9SEW6 157 aa5.54□□□□□ -1.52
VPS41-211ENST00000466017 TEX51A0A1B0GUA7 166 aa5.54□□□□□ -1.52
VPS41-211ENST00000466017 LOC285095A0A1B0GVY8 99 aa5.54□□□□□ -1.52
VPS41-211ENST00000466017 A0A1W2PQ67 120 aa5.54□□□□□ -1.52
VPS41-211ENST00000466017 ESYT3A0FGR9 886 aa5.54□□□□□ -1.52
VPS41-211ENST00000466017 ZC3H12DA2A288 527 aaKnown RBP5.54□□□□□ -1.52
VPS41-211ENST00000466017 J3KR12 359 aa5.54□□□□□ -1.52
VPS41-211ENST00000466017 DFFAO00273 331 aa5.54□□□□□ -1.52
VPS41-211ENST00000466017 TRDMT1O14717 391 aaKnown RBP5.54□□□□□ -1.52
VPS41-211ENST00000466017 TSPAN3O60637 253 aa5.54□□□□□ -1.52
VPS41-211ENST00000466017 TBX10O75333 385 aa5.54□□□□□ -1.52
VPS41-211ENST00000466017 SPAG6O75602 509 aa5.54□□□□□ -1.52
VPS41-211ENST00000466017 TCEA3O75764 348 aa5.54□□□□□ -1.52
VPS41-211ENST00000466017 NFATC1O95644 943 aa5.54□□□□□ -1.52
VPS41-211ENST00000466017 AP2A1O95782 977 aa5.54□□□□□ -1.52
VPS41-211ENST00000466017 ASLP04424 464 aa5.54□□□□□ -1.52
VPS41-211ENST00000466017 SRPRAP08240 638 aaKnown RBP5.54□□□□□ -1.52
VPS41-211ENST00000466017 ABHD2P08910 425 aa5.54□□□□□ -1.52
VPS41-211ENST00000466017 DBHP09172 617 aa5.54□□□□□ -1.52
VPS41-211ENST00000466017 NUDT17P0C025 328 aa5.54□□□□□ -1.52
VPS41-211ENST00000466017 FAM153BP0C7A2 387 aa5.54□□□□□ -1.52
VPS41-211ENST00000466017 IRF1P10914 325 aa5.54□□□□□ -1.52
VPS41-211ENST00000466017 GLDCP23378 1020 aa5.54□□□□□ -1.52
VPS41-211ENST00000466017 FCARP24071 287 aa5.54□□□□□ -1.52
VPS41-211ENST00000466017 MMP13P45452 471 aa5.54□□□□□ -1.52
VPS41-211ENST00000466017 SGSHP51688 502 aa5.54□□□□□ -1.52
VPS41-211ENST00000466017 ARL4CP56559 192 aa5.54□□□□□ -1.52
VPS41-211ENST00000466017 RBM10P98175 930 aaKnown RBP5.54□□□□□ -1.52
VPS41-211ENST00000466017 DLX2Q07687 328 aaPredicted RBP5.54□□□□□ -1.52
VPS41-211ENST00000466017 ZBTB17Q13105 803 aa5.54□□□□□ -1.52
VPS41-211ENST00000466017 FRG1Q14331 258 aaKnown RBP5.54□□□□□ -1.52
VPS41-211ENST00000466017 CBX2Q14781 532 aaPredicted RBP5.54□□□□□ -1.52
VPS41-211ENST00000466017 CASP8Q14790 479 aa5.54□□□□□ -1.52
VPS41-211ENST00000466017 RASA2Q15283 850 aa5.54□□□□□ -1.52
VPS41-211ENST00000466017 CYTH1Q15438 398 aa5.54□□□□□ -1.52
VPS41-211ENST00000466017 TRIP13Q15645 432 aaPredicted RBP5.54□□□□□ -1.52
VPS41-211ENST00000466017 PLEKHG6Q3KR16 790 aa5.54□□□□□ -1.52
VPS41-211ENST00000466017 FAM153CQ494X1 144 aa5.54□□□□□ -1.52
VPS41-211ENST00000466017 FSCBQ5H9T9 825 aa5.54□□□□□ -1.52
VPS41-211ENST00000466017 LY6G5CQ5SRR4 150 aa5.54□□□□□ -1.52
VPS41-211ENST00000466017 CFAP58Q5T655 872 aa5.54□□□□□ -1.52
VPS41-211ENST00000466017 RNF219Q5W0B1 726 aaPredicted RBP5.54□□□□□ -1.52
VPS41-211ENST00000466017 IL31Q6EBC2 164 aa5.54□□□□□ -1.52
VPS41-211ENST00000466017 NAPEPLDQ6IQ20 393 aa5.54□□□□□ -1.52
VPS41-211ENST00000466017 ZNF449Q6P9G9 518 aa5.54□□□□□ -1.52
VPS41-211ENST00000466017 VITQ6UXI7 678 aa5.54□□□□□ -1.52
VPS41-211ENST00000466017 LRIG3Q6UXM1 1119 aa5.54□□□□□ -1.52
VPS41-211ENST00000466017 RANBP10Q6VN20 620 aa5.54□□□□□ -1.52
VPS41-211ENST00000466017 CENPUQ71F23 418 aa5.54□□□□□ -1.52
VPS41-211ENST00000466017 OTOP3Q7RTS5 596 aa5.54□□□□□ -1.52
VPS41-211ENST00000466017 MTERF4Q7Z6M4 381 aaKnown RBP5.54□□□□□ -1.52
VPS41-211ENST00000466017 TFAP2DQ7Z6R9 452 aa5.54□□□□□ -1.52
VPS41-211ENST00000466017 LINC00523Q86TU6 105 aa5.54□□□□□ -1.52
VPS41-211ENST00000466017 ZNF227Q86WZ6 799 aa5.54□□□□□ -1.52
VPS41-211ENST00000466017 TMEM25Q86YD3 366 aa5.54□□□□□ -1.52
VPS41-211ENST00000466017 IGDCC3Q8IVU1 814 aa5.54□□□□□ -1.52
VPS41-211ENST00000466017 MFN1Q8IWA4 741 aa5.54□□□□□ -1.52
VPS41-211ENST00000466017 SUGP1Q8IWZ8 645 aaKnown RBP5.54□□□□□ -1.52
VPS41-211ENST00000466017 PDIK1LQ8N165 341 aa5.54□□□□□ -1.52
VPS41-211ENST00000466017 OR7D4Q8NG98 312 aa5.54□□□□□ -1.52
VPS41-211ENST00000466017 ARRDC2Q8TBH0 407 aa5.54□□□□□ -1.52
VPS41-211ENST00000466017 ATP2A3Q93084 1043 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms