RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 RCOR3Q9P2K3 495 aaPredicted RBP22.7■■□□□ 1.22
USP42-205ENST00000465073 IP6K2Q9UHH9 426 aa22.7■■□□□ 1.22
USP42-205ENST00000465073 PCDHGA4Q9Y5G9 962 aa22.7■■□□□ 1.22
USP42-205ENST00000465073 ST14Q9Y5Y6 855 aa22.7■■□□□ 1.22
USP42-205ENST00000465073 IGHV5-10-1A0A0J9YXX1 117 aa22.69■■□□□ 1.22
USP42-205ENST00000465073 SLC28A2O43868 658 aa22.69■■□□□ 1.22
USP42-205ENST00000465073 CTPS1P17812 591 aa22.69■■□□□ 1.22
USP42-205ENST00000465073 SQSTM1Q13501 440 aa22.69■■□□□ 1.22
USP42-205ENST00000465073 TRA2AQ13595 282 aaKnown RBP eCLIP22.69■■□□□ 1.22
USP42-205ENST00000465073 FIGNQ5HY92 759 aa22.69■■□□□ 1.22
USP42-205ENST00000465073 VASH2Q86V25 355 aa22.69■■□□□ 1.22
USP42-205ENST00000465073 NT5MQ9NPB1 228 aa22.69■■□□□ 1.22
USP42-205ENST00000465073 BZW2Q9Y6E2 419 aaKnown RBP22.69■■□□□ 1.22
USP42-205ENST00000465073 CCL4P13236 92 aa22.68■■□□□ 1.22
USP42-205ENST00000465073 LIMK2P53671 638 aa22.68■■□□□ 1.22
USP42-205ENST00000465073 KRT81Q14533 505 aa22.68■■□□□ 1.22
USP42-205ENST00000465073 DOK6Q6PKX4 331 aa22.68■■□□□ 1.22
USP42-205ENST00000465073 ZNF765Q7L2R6 523 aa22.68■■□□□ 1.22
USP42-205ENST00000465073 NLRP8Q86W28 1048 aa22.68■■□□□ 1.22
USP42-205ENST00000465073 OR4D9Q8NGE8 314 aa22.68■■□□□ 1.22
USP42-205ENST00000465073 PATE1Q8WXA2 126 aa22.68■■□□□ 1.22
USP42-205ENST00000465073 EXTL1Q92935 676 aa22.68■■□□□ 1.22
USP42-205ENST00000465073 AP2M1Q96CW1 435 aa22.68■■□□□ 1.22
USP42-205ENST00000465073 CCDC74BQ96LY2 380 aa22.68■■□□□ 1.22
USP42-205ENST00000465073 OR2M4Q96R27 311 aa22.68■■□□□ 1.22
USP42-205ENST00000465073 TAAR9Q96RI9 348 aa22.68■■□□□ 1.22
USP42-205ENST00000465073 SEMA3CQ99985 751 aa22.68■■□□□ 1.22
USP42-205ENST00000465073 DPYSL5Q9BPU6 564 aa22.68■■□□□ 1.22
USP42-205ENST00000465073 ABCG8Q9H221 673 aa22.68■■□□□ 1.22
USP42-205ENST00000465073 TMEM63CQ9P1W3 806 aa22.68■■□□□ 1.22
USP42-205ENST00000465073 PPM1DO15297 605 aa22.67■■□□□ 1.22
USP42-205ENST00000465073 FZD6O60353 706 aa22.67■■□□□ 1.22
USP42-205ENST00000465073 SOD1P00441 154 aa22.67■■□□□ 1.22
USP42-205ENST00000465073 PYGLP06737 847 aa22.67■■□□□ 1.22
USP42-205ENST00000465073 PDHA1P08559 390 aa22.67■■□□□ 1.22
USP42-205ENST00000465073 SFTPCP11686 197 aa22.67■■□□□ 1.22
USP42-205ENST00000465073 CES1P23141 567 aa22.67■■□□□ 1.22
USP42-205ENST00000465073 ACTR1BP42025 376 aa22.67■■□□□ 1.22
USP42-205ENST00000465073 ACTR1AP61163 376 aa22.67■■□□□ 1.22
USP42-205ENST00000465073 SLC25A11Q02978 314 aaKnown RBP22.67■■□□□ 1.22
USP42-205ENST00000465073 NFATC3Q12968 1075 aa22.67■■□□□ 1.22
USP42-205ENST00000465073 NR1I3Q14994 352 aa22.67■■□□□ 1.22
USP42-205ENST00000465073 LRRC66Q68CR7 880 aa22.67■■□□□ 1.22
USP42-205ENST00000465073 RFLNAQ6ZTI6 216 aa22.67■■□□□ 1.22
USP42-205ENST00000465073 RCBTB1Q8NDN9 531 aa22.67■■□□□ 1.22
USP42-205ENST00000465073 FAM117AQ9C073 453 aa22.67■■□□□ 1.22
USP42-205ENST00000465073 POLR1EQ9GZS1 481 aaKnown RBP22.67■■□□□ 1.22
USP42-205ENST00000465073 THAP2Q9H0W7 228 aa22.67■■□□□ 1.22
USP42-205ENST00000465073 CD84Q9UIB8 345 aa22.67■■□□□ 1.22
USP42-205ENST00000465073 TMEM98Q9Y2Y6 226 aa22.67■■□□□ 1.22
USP42-205ENST00000465073 PCDHGA3Q9Y5H0 932 aa22.67■■□□□ 1.22
USP42-205ENST00000465073 STMND1H3BQB6 276 aa22.66■■□□□ 1.22
USP42-205ENST00000465073 FGF3P11487 239 aaPredicted RBP22.66■■□□□ 1.22
USP42-205ENST00000465073 ZNF30P17039 623 aa22.66■■□□□ 1.22
USP42-205ENST00000465073 IL4RP24394 825 aa22.66■■□□□ 1.22
USP42-205ENST00000465073 ZNF165P49910 485 aa22.66■■□□□ 1.22
USP42-205ENST00000465073 PTSQ03393 145 aa22.66■■□□□ 1.22
USP42-205ENST00000465073 ITKQ08881 620 aa22.66■■□□□ 1.22
USP42-205ENST00000465073 TDRD12Q587J7 1177 aaKnown RBP22.66■■□□□ 1.22
USP42-205ENST00000465073 HGSNATQ68CP4 663 aa22.66■■□□□ 1.22
USP42-205ENST00000465073 AGBL5Q8NDL9 886 aa22.66■■□□□ 1.22
USP42-205ENST00000465073 SYN2Q92777 582 aaPredicted RBP22.66■■□□□ 1.22
USP42-205ENST00000465073 CLMPQ9H6B4 373 aa22.66■■□□□ 1.22
USP42-205ENST00000465073 ANAPC7Q9UJX3 599 aa22.66■■□□□ 1.22
USP42-205ENST00000465073 DNPEPQ9ULA0 475 aa22.66■■□□□ 1.22
USP42-205ENST00000465073 HEMK1Q9Y5R4 338 aaPredicted RBP22.66■■□□□ 1.22
USP42-205ENST00000465073 IGHV1OR21-1A0A087WYE8 117 aa22.66■■□□□ 1.22
USP42-205ENST00000465073 A0A0U1RQS6 177 aa22.66■■□□□ 1.22
USP42-205ENST00000465073 SERPINC1P01008 464 aa22.66■■□□□ 1.22
USP42-205ENST00000465073 GARSP41250 739 aaKnown RBP22.66■■□□□ 1.22
USP42-205ENST00000465073 EPHB1P54762 984 aa22.66■■□□□ 1.22
USP42-205ENST00000465073 KCNC4Q03721 635 aa22.66■■□□□ 1.22
USP42-205ENST00000465073 LRP8Q14114 963 aa22.66■■□□□ 1.22
USP42-205ENST00000465073 PYCR3Q53H96 274 aa22.66■■□□□ 1.22
USP42-205ENST00000465073 CCDC122Q5T0U0 273 aa22.66■■□□□ 1.22
USP42-205ENST00000465073 NKAIN2Q5VXU1 208 aa22.66■■□□□ 1.22
USP42-205ENST00000465073 PRICKLE2Q7Z3G6 844 aa22.66■■□□□ 1.22
USP42-205ENST00000465073 CCDC112Q8NEF3 446 aa22.66■■□□□ 1.22
USP42-205ENST00000465073 FAM71BQ8TC56 605 aa22.66■■□□□ 1.22
USP42-205ENST00000465073 SCAMP4Q969E2 229 aa22.66■■□□□ 1.22
USP42-205ENST00000465073 BTBD6Q96KE9 485 aa22.66■■□□□ 1.22
USP42-205ENST00000465073 NUP85Q9BW27 656 aa22.66■■□□□ 1.22
USP42-205ENST00000465073 STARD5Q9NSY2 213 aa22.66■■□□□ 1.22
USP42-205ENST00000465073 HAUS2Q9NVX0 235 aa22.66■■□□□ 1.22
USP42-205ENST00000465073 KCNK4Q9NYG8 393 aa22.66■■□□□ 1.22
USP42-205ENST00000465073 PLEKHM1Q9Y4G2 1056 aa22.66■■□□□ 1.22
USP42-205ENST00000465073 SPTA1P02549 2419 aa22.66■■□□□ 1.22
USP42-205ENST00000465073 A0A0J9YYE9 177 aa22.65■■□□□ 1.22
USP42-205ENST00000465073 TRBC1P01850 177 aa22.65■■□□□ 1.22
USP42-205ENST00000465073 WT1P19544 449 aaPredicted RBP22.65■■□□□ 1.22
USP42-205ENST00000465073 ATP1A2P50993 1020 aa22.65■■□□□ 1.22
USP42-205ENST00000465073 GALNT2Q10471 571 aa22.65■■□□□ 1.22
USP42-205ENST00000465073 MMRN1Q13201 1228 aa22.65■■□□□ 1.22
USP42-205ENST00000465073 TBR1Q16650 682 aa22.65■■□□□ 1.22
USP42-205ENST00000465073 HADHQ16836 314 aaKnown RBP22.65■■□□□ 1.22
USP42-205ENST00000465073 ALG1LQ6GMV1 187 aa22.65■■□□□ 1.22
USP42-205ENST00000465073 TIGD7Q6NT04 549 aaPredicted RBP22.65■■□□□ 1.22
USP42-205ENST00000465073 RAVER1Q8IY67 606 aaKnown RBP22.65■■□□□ 1.22
USP42-205ENST00000465073 NRSN1Q8IZ57 195 aa22.65■■□□□ 1.22
USP42-205ENST00000465073 MAML1Q92585 1016 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms