RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 SPC24Q8NBT2 197 aa7.94□□□□□ -1.14
CDC42BPA-210ENST00000462553 ACRBPQ8NEB7 543 aa7.94□□□□□ -1.14
CDC42BPA-210ENST00000462553 HTR3CQ8WXA8 447 aa7.94□□□□□ -1.14
CDC42BPA-210ENST00000462553 OR1E3Q8WZA6 343 aa7.94□□□□□ -1.14
CDC42BPA-210ENST00000462553 EXTL1Q92935 676 aa7.94□□□□□ -1.14
CDC42BPA-210ENST00000462553 SGF29Q96ES7 293 aa7.94□□□□□ -1.14
CDC42BPA-210ENST00000462553 WDR92Q96MX6 357 aa7.94□□□□□ -1.14
CDC42BPA-210ENST00000462553 STRADBQ9C0K7 418 aa7.94□□□□□ -1.14
CDC42BPA-210ENST00000462553 KLQ9UEF7 1012 aa7.94□□□□□ -1.14
CDC42BPA-210ENST00000462553 PISDQ9UG56 409 aa7.94□□□□□ -1.14
CDC42BPA-210ENST00000462553 APPL1Q9UKG1 709 aa7.94□□□□□ -1.14
CDC42BPA-210ENST00000462553 LOXL2Q9Y4K0 774 aa7.94□□□□□ -1.14
CDC42BPA-210ENST00000462553 PCDHA13Q9Y5I0 950 aa7.94□□□□□ -1.14
CDC42BPA-210ENST00000462553 EPN1Q9Y6I3 576 aaPredicted RBP7.94□□□□□ -1.14
CDC42BPA-210ENST00000462553 DGKBQ9Y6T7 804 aa7.94□□□□□ -1.14
CDC42BPA-210ENST00000462553 ITPR2Q14571 2701 aa7.94□□□□□ -1.14
CDC42BPA-210ENST00000462553 ICE1Q9Y2F5 2266 aa7.93□□□□□ -1.14
CDC42BPA-210ENST00000462553 BHMG1C9JSJ3 638 aaPredicted RBP7.93□□□□□ -1.14
CDC42BPA-210ENST00000462553 TMX2-CTNND1H3BSU7 103 aa7.93□□□□□ -1.14
CDC42BPA-210ENST00000462553 PJA2O43164 708 aa7.93□□□□□ -1.14
CDC42BPA-210ENST00000462553 MAP3K6O95382 1288 aa7.93□□□□□ -1.14
CDC42BPA-210ENST00000462553 ITGB2P05107 769 aa7.93□□□□□ -1.14
CDC42BPA-210ENST00000462553 KRT7P08729 469 aa7.93□□□□□ -1.14
CDC42BPA-210ENST00000462553 FAM87AP0C7U9 286 aa7.93□□□□□ -1.14
CDC42BPA-210ENST00000462553 CTSEP14091 401 aa7.93□□□□□ -1.14
CDC42BPA-210ENST00000462553 CR2P20023 1033 aa7.93□□□□□ -1.14
CDC42BPA-210ENST00000462553 COMTP21964 271 aa7.93□□□□□ -1.14
CDC42BPA-210ENST00000462553 SERPINB6P35237 376 aa7.93□□□□□ -1.14
CDC42BPA-210ENST00000462553 CSNK1DP48730 415 aa7.93□□□□□ -1.14
CDC42BPA-210ENST00000462553 MARCKSL1P49006 195 aa7.93□□□□□ -1.14
CDC42BPA-210ENST00000462553 CSRP3P50461 194 aa7.93□□□□□ -1.14
CDC42BPA-210ENST00000462553 SUOXP51687 545 aa7.93□□□□□ -1.14
CDC42BPA-210ENST00000462553 ARSDP51689 593 aa7.93□□□□□ -1.14
CDC42BPA-210ENST00000462553 KIAA1024LP59773 190 aa7.93□□□□□ -1.14
CDC42BPA-210ENST00000462553 GBE1Q04446 702 aa7.93□□□□□ -1.14
CDC42BPA-210ENST00000462553 RAD51Q06609 339 aa7.93□□□□□ -1.14
CDC42BPA-210ENST00000462553 SLC10A7Q0GE19 358 aa7.93□□□□□ -1.14
CDC42BPA-210ENST00000462553 SLC10A2Q12908 348 aaPredicted RBP7.93□□□□□ -1.14
CDC42BPA-210ENST00000462553 RFTN1Q14699 578 aaPredicted RBP7.93□□□□□ -1.14
CDC42BPA-210ENST00000462553 LBRQ14739 615 aaKnown RBP7.93□□□□□ -1.14
CDC42BPA-210ENST00000462553 C16orf72Q14CZ0 275 aa7.93□□□□□ -1.14
CDC42BPA-210ENST00000462553 PDK2Q15119 407 aa7.93□□□□□ -1.14
CDC42BPA-210ENST00000462553 TAZQ16635 292 aa7.93□□□□□ -1.14
CDC42BPA-210ENST00000462553 C14orf28Q4W4Y0 310 aa7.93□□□□□ -1.14
CDC42BPA-210ENST00000462553 TMCO4Q5TGY1 634 aa7.93□□□□□ -1.14
CDC42BPA-210ENST00000462553 LRRC38Q5VT99 294 aa7.93□□□□□ -1.14
CDC42BPA-210ENST00000462553 SLC9A4Q6AI14 798 aa7.93□□□□□ -1.14
CDC42BPA-210ENST00000462553 OGFOD3Q6PK18 319 aa7.93□□□□□ -1.14
CDC42BPA-210ENST00000462553 RD3Q7Z3Z2 195 aa7.93□□□□□ -1.14
CDC42BPA-210ENST00000462553 ZFAND4Q86XD8 727 aa7.93□□□□□ -1.14
CDC42BPA-210ENST00000462553 VSIG1Q86XK7 387 aa7.93□□□□□ -1.14
CDC42BPA-210ENST00000462553 ATPAF2Q8N5M1 289 aa7.93□□□□□ -1.14
CDC42BPA-210ENST00000462553 TEX26Q8N6G2 289 aa7.93□□□□□ -1.14
CDC42BPA-210ENST00000462553 PLD5Q8N7P1 536 aa7.93□□□□□ -1.14
CDC42BPA-210ENST00000462553 CCL4L1Q8NHW4 92 aa7.93□□□□□ -1.14
CDC42BPA-210ENST00000462553 HCAR2Q8TDS4 363 aa7.93□□□□□ -1.14
CDC42BPA-210ENST00000462553 LRRN4Q8WUT4 740 aa7.93□□□□□ -1.14
CDC42BPA-210ENST00000462553 MAML1Q92585 1016 aa7.93□□□□□ -1.14
CDC42BPA-210ENST00000462553 PMEPA1Q969W9 287 aa7.93□□□□□ -1.14
CDC42BPA-210ENST00000462553 ECHDC3Q96DC8 303 aa7.93□□□□□ -1.14
CDC42BPA-210ENST00000462553 TMEM74Q96NL1 305 aa7.93□□□□□ -1.14
CDC42BPA-210ENST00000462553 ZNF599Q96NL3 588 aa7.93□□□□□ -1.14
CDC42BPA-210ENST00000462553 RNF157Q96PX1 679 aa7.93□□□□□ -1.14
CDC42BPA-210ENST00000462553 PSKH2Q96QS6 385 aa7.93□□□□□ -1.14
CDC42BPA-210ENST00000462553 MGME1Q9BQP7 344 aa7.93□□□□□ -1.14
CDC42BPA-210ENST00000462553 CINPQ9BW66 212 aaPredicted RBP7.93□□□□□ -1.14
CDC42BPA-210ENST00000462553 LACRTQ9GZZ8 138 aa7.93□□□□□ -1.14
CDC42BPA-210ENST00000462553 TMEM168Q9H0V1 697 aa7.93□□□□□ -1.14
CDC42BPA-210ENST00000462553 SUV39H2Q9H5I1 410 aa7.93□□□□□ -1.14
CDC42BPA-210ENST00000462553 MRPL40Q9NQ50 206 aaKnown RBP7.93□□□□□ -1.14
CDC42BPA-210ENST00000462553 DTLQ9NZJ0 730 aa7.93□□□□□ -1.14
CDC42BPA-210ENST00000462553 IMPACTQ9P2X3 320 aa7.93□□□□□ -1.14
CDC42BPA-210ENST00000462553 DOLKQ9UPQ8 538 aa7.93□□□□□ -1.14
CDC42BPA-210ENST00000462553 ATP8A1Q9Y2Q0 1164 aa7.93□□□□□ -1.14
CDC42BPA-210ENST00000462553 RNF215Q9Y6U7 377 aa7.93□□□□□ -1.14
CDC42BPA-210ENST00000462553 DUSP10Q9Y6W6 482 aa7.93□□□□□ -1.14
CDC42BPA-210ENST00000462553 CRYBG3Q68DQ2 2970 aa7.93□□□□□ -1.14
CDC42BPA-210ENST00000462553 NOTCH2Q04721 2471 aa7.92□□□□□ -1.14
CDC42BPA-210ENST00000462553 TTC24A2A3L6 582 aaPredicted RBP7.92□□□□□ -1.14
CDC42BPA-210ENST00000462553 LRRD1A4D1F6 860 aa7.92□□□□□ -1.14
CDC42BPA-210ENST00000462553 BTNL10A8MVZ5 291 aa7.92□□□□□ -1.14
CDC42BPA-210ENST00000462553 B4DGG1 531 aa7.92□□□□□ -1.14
CDC42BPA-210ENST00000462553 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.92□□□□□ -1.14
CDC42BPA-210ENST00000462553 AGRPO00253 132 aa7.92□□□□□ -1.14
CDC42BPA-210ENST00000462553 TRAFD1O14545 582 aaPredicted RBP7.92□□□□□ -1.14
CDC42BPA-210ENST00000462553 PSTPIP1O43586 416 aa7.92□□□□□ -1.14
CDC42BPA-210ENST00000462553 PALMO75781 387 aa7.92□□□□□ -1.14
CDC42BPA-210ENST00000462553 RECQL5O94762 991 aaPredicted RBP7.92□□□□□ -1.14
CDC42BPA-210ENST00000462553 KRT1P04264 644 aa7.92□□□□□ -1.14
CDC42BPA-210ENST00000462553 JMJD7P0C870 316 aa7.92□□□□□ -1.14
CDC42BPA-210ENST00000462553 PNLIPP16233 465 aa7.92□□□□□ -1.14
CDC42BPA-210ENST00000462553 GLB1P16278 677 aa7.92□□□□□ -1.14
CDC42BPA-210ENST00000462553 HTR1BP28222 390 aa7.92□□□□□ -1.14
CDC42BPA-210ENST00000462553 GARSP41250 739 aaKnown RBP7.92□□□□□ -1.14
CDC42BPA-210ENST00000462553 SLC1A1P43005 524 aa7.92□□□□□ -1.14
CDC42BPA-210ENST00000462553 VAV2P52735 878 aa7.92□□□□□ -1.14
CDC42BPA-210ENST00000462553 CYP4F2P78329 520 aa7.92□□□□□ -1.14
CDC42BPA-210ENST00000462553 B4GALNT1Q00973 533 aa7.92□□□□□ -1.14
CDC42BPA-210ENST00000462553 IHHQ14623 411 aa7.92□□□□□ -1.14
CDC42BPA-210ENST00000462553 TBR1Q16650 682 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms