RNA–Protein interactions for RNA: ENST00000462125.5

C9orf3-210, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 961 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-210ENST00000462125 GPR1P46091 355 aa13.17□□□□□ -0.3
C9orf3-210ENST00000462125 AP1B1Q10567 949 aa13.17□□□□□ -0.3
C9orf3-210ENST00000462125 TFDP2Q14188 446 aa13.17□□□□□ -0.3
C9orf3-210ENST00000462125 SPA17Q15506 151 aa13.17□□□□□ -0.3
C9orf3-210ENST00000462125 QPCTQ16769 361 aa13.17□□□□□ -0.3
C9orf3-210ENST00000462125 TEX44Q53QW1 395 aa13.17□□□□□ -0.3
C9orf3-210ENST00000462125 ODF2Q5BJF6 829 aa13.17□□□□□ -0.3
C9orf3-210ENST00000462125 RAET1GQ6H3X3 334 aa13.17□□□□□ -0.3
C9orf3-210ENST00000462125 C19orf48Q6RUI8 117 aa13.17□□□□□ -0.3
C9orf3-210ENST00000462125 IGF2-ASQ6U949 168 aa13.17□□□□□ -0.3
C9orf3-210ENST00000462125 RBM44Q6ZP01 1051 aaKnown RBP13.17□□□□□ -0.3
C9orf3-210ENST00000462125 TAF8Q7Z7C8 310 aa13.17□□□□□ -0.3
C9orf3-210ENST00000462125 C17orf82Q86X59 251 aaPredicted RBP13.17□□□□□ -0.3
C9orf3-210ENST00000462125 NRROSQ86YC3 692 aa13.17□□□□□ -0.3
C9orf3-210ENST00000462125 RCOR2Q8IZ40 523 aa13.17□□□□□ -0.3
C9orf3-210ENST00000462125 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.17□□□□□ -0.3
C9orf3-210ENST00000462125 KYQ8NBH2 561 aa13.17□□□□□ -0.3
C9orf3-210ENST00000462125 HNRNPLLQ8WVV9 542 aaKnown RBP13.17□□□□□ -0.3
C9orf3-210ENST00000462125 SCAMP4Q969E2 229 aa13.17□□□□□ -0.3
C9orf3-210ENST00000462125 COX14Q96I36 57 aa13.17□□□□□ -0.3
C9orf3-210ENST00000462125 TRIB3Q96RU7 358 aa13.17□□□□□ -0.3
C9orf3-210ENST00000462125 WDR24Q96S15 920 aa13.17□□□□□ -0.3
C9orf3-210ENST00000462125 MLPHQ9BV36 600 aaPredicted RBP13.17□□□□□ -0.3
C9orf3-210ENST00000462125 ADGRE3Q9BY15 652 aa13.17□□□□□ -0.3
C9orf3-210ENST00000462125 SLC25A51Q9H1U9 297 aa13.17□□□□□ -0.3
C9orf3-210ENST00000462125 POLR1BQ9H9Y6 1135 aa13.17□□□□□ -0.3
C9orf3-210ENST00000462125 CARS2Q9HA77 564 aaKnown RBP13.17□□□□□ -0.3
C9orf3-210ENST00000462125 SIRPGQ9P1W8 387 aa13.17□□□□□ -0.3
C9orf3-210ENST00000462125 RABGEF1Q9UJ41 708 aa13.17□□□□□ -0.3
C9orf3-210ENST00000462125 LHX6Q9UPM6 363 aa13.17□□□□□ -0.3
C9orf3-210ENST00000462125 LRP4O75096 1905 aa13.16□□□□□ -0.3
C9orf3-210ENST00000462125 RP1P56715 2156 aa13.16□□□□□ -0.3
C9orf3-210ENST00000462125 A0A1W2PNU3 283 aaPredicted RBP13.16□□□□□ -0.3
C9orf3-210ENST00000462125 A0A1W2PQM1 296 aa13.16□□□□□ -0.3
C9orf3-210ENST00000462125 CASC3O15234 703 aaKnown RBP13.16□□□□□ -0.3
C9orf3-210ENST00000462125 CST8O60676 142 aa13.16□□□□□ -0.3
C9orf3-210ENST00000462125 ZRANB2O95218 330 aaKnown RBP eCLIP13.16□□□□□ -0.3
C9orf3-210ENST00000462125 FGF1P05230 155 aa13.16□□□□□ -0.3
C9orf3-210ENST00000462125 TNNT1P13805 278 aa13.16□□□□□ -0.3
C9orf3-210ENST00000462125 ACTN2P35609 894 aa13.16□□□□□ -0.3
C9orf3-210ENST00000462125 CYLC1P35663 651 aaPredicted RBP13.16□□□□□ -0.3
C9orf3-210ENST00000462125 POLD2P49005 469 aa13.16□□□□□ -0.3
C9orf3-210ENST00000462125 SPINT3P49223 89 aa13.16□□□□□ -0.3
C9orf3-210ENST00000462125 ADCY2Q08462 1091 aa13.16□□□□□ -0.3
C9orf3-210ENST00000462125 HLTFQ14527 1009 aaKnown RBP eCLIP13.16□□□□□ -0.3
C9orf3-210ENST00000462125 TCEA2Q15560 299 aa13.16□□□□□ -0.3
C9orf3-210ENST00000462125 SLC14A2Q15849 920 aa13.16□□□□□ -0.3
C9orf3-210ENST00000462125 COL28A1Q2UY09 1125 aa13.16□□□□□ -0.3
C9orf3-210ENST00000462125 TBC1D25Q3MII6 688 aa13.16□□□□□ -0.3
C9orf3-210ENST00000462125 C14orf28Q4W4Y0 310 aa13.16□□□□□ -0.3
C9orf3-210ENST00000462125 CERCAMQ5T4B2 595 aa13.16□□□□□ -0.3
C9orf3-210ENST00000462125 SPOCD1Q6ZMY3 1216 aa13.16□□□□□ -0.3
C9orf3-210ENST00000462125 NT5DC3Q86UY8 548 aa13.16□□□□□ -0.3
C9orf3-210ENST00000462125 TMTC1Q8IUR5 882 aa13.16□□□□□ -0.3
C9orf3-210ENST00000462125 KATNAL2Q8IYT4 538 aa13.16□□□□□ -0.3
C9orf3-210ENST00000462125 LPCAT1Q8NF37 534 aa13.16□□□□□ -0.3
C9orf3-210ENST00000462125 EXD1Q8NHP7 514 aa13.16□□□□□ -0.3
C9orf3-210ENST00000462125 PTCD2Q8WV60 388 aaKnown RBP13.16□□□□□ -0.3
C9orf3-210ENST00000462125 CCDC74AQ96AQ1 378 aa13.16□□□□□ -0.3
C9orf3-210ENST00000462125 CALR3Q96L12 384 aaKnown RBP13.16□□□□□ -0.3
C9orf3-210ENST00000462125 TEKT5Q96M29 485 aa13.16□□□□□ -0.3
C9orf3-210ENST00000462125 ZNF578Q96N58 590 aaPredicted RBP13.16□□□□□ -0.3
C9orf3-210ENST00000462125 AGAP3Q96P47 875 aa13.16□□□□□ -0.3
C9orf3-210ENST00000462125 AGAP2Q99490 1192 aa13.16□□□□□ -0.3
C9orf3-210ENST00000462125 GSDMCQ9BYG8 508 aa13.16□□□□□ -0.3
C9orf3-210ENST00000462125 DPEP2Q9H4A9 486 aa13.16□□□□□ -0.3
C9orf3-210ENST00000462125 LUC7LQ9NQ29 371 aaKnown RBP13.16□□□□□ -0.3
C9orf3-210ENST00000462125 SPATS2LQ9NUQ6 558 aaKnown RBP13.16□□□□□ -0.3
C9orf3-210ENST00000462125 CD84Q9UIB8 345 aa13.16□□□□□ -0.3
C9orf3-210ENST00000462125 MOSPD1Q9UJG1 213 aa13.16□□□□□ -0.3
C9orf3-210ENST00000462125 SUFUQ9UMX1 484 aa13.16□□□□□ -0.3
C9orf3-210ENST00000462125 TFR2Q9UP52 801 aa13.16□□□□□ -0.3
C9orf3-210ENST00000462125 ST14Q9Y5Y6 855 aa13.16□□□□□ -0.3
C9orf3-210ENST00000462125 GCN1Q92616 2671 aaKnown RBP13.15□□□□□ -0.3
C9orf3-210ENST00000462125 NUDT21O43809 227 aaKnown RBP13.15□□□□□ -0.3
C9orf3-210ENST00000462125 NDUFA10O95299 355 aa13.15□□□□□ -0.3
C9orf3-210ENST00000462125 MPOP05164 745 aa13.15□□□□□ -0.3
C9orf3-210ENST00000462125 ADCY8P40145 1251 aa13.15□□□□□ -0.3
C9orf3-210ENST00000462125 PDX1P52945 283 aa13.15□□□□□ -0.3
C9orf3-210ENST00000462125 ERVPABLB-1P60509 514 aa13.15□□□□□ -0.3
C9orf3-210ENST00000462125 DYNLT1P63172 113 aa13.15□□□□□ -0.3
C9orf3-210ENST00000462125 GABREP78334 506 aa13.15□□□□□ -0.3
C9orf3-210ENST00000462125 CCL7P80098 99 aa13.15□□□□□ -0.3
C9orf3-210ENST00000462125 SPIDRQ14159 915 aa13.15□□□□□ -0.3
C9orf3-210ENST00000462125 PRKD1Q15139 912 aaPredicted RBP13.15□□□□□ -0.3
C9orf3-210ENST00000462125 TFDP3Q5H9I0 405 aa13.15□□□□□ -0.3
C9orf3-210ENST00000462125 C11orf63Q6NUN7 778 aa13.15□□□□□ -0.3
C9orf3-210ENST00000462125 TMC3Q7Z5M5 1100 aa13.15□□□□□ -0.3
C9orf3-210ENST00000462125 SFTPA2Q8IWL1 248 aa13.15□□□□□ -0.3
C9orf3-210ENST00000462125 EID2BQ96D98 161 aa13.15□□□□□ -0.3
C9orf3-210ENST00000462125 ATXN7L3BQ96GX2 97 aa13.15□□□□□ -0.3
C9orf3-210ENST00000462125 PRR11Q96HE9 360 aaPredicted RBP13.15□□□□□ -0.3
C9orf3-210ENST00000462125 HIC2Q96JB3 615 aa13.15□□□□□ -0.3
C9orf3-210ENST00000462125 RIOK2Q9BVS4 552 aaKnown RBP13.15□□□□□ -0.3
C9orf3-210ENST00000462125 CEP41Q9BYV8 373 aa13.15□□□□□ -0.3
C9orf3-210ENST00000462125 LRRN3Q9H3W5 708 aa13.15□□□□□ -0.3
C9orf3-210ENST00000462125 GOLPH3Q9H4A6 298 aa13.15□□□□□ -0.3
C9orf3-210ENST00000462125 FAM83DQ9H4H8 585 aa13.15□□□□□ -0.3
C9orf3-210ENST00000462125 GLOD4Q9HC38 313 aa13.15□□□□□ -0.3
C9orf3-210ENST00000462125 MAGEE1Q9HCI5 957 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms