RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 PMPCBO75439 489 aa15.35■□□□□ 0.05
VARS-219ENST00000461328 PRLP01236 227 aa15.35■□□□□ 0.05
VARS-219ENST00000461328 HOXC4P09017 264 aaPredicted RBP15.35■□□□□ 0.05
VARS-219ENST00000461328 MYCLP1P12525 358 aaPredicted RBP15.35■□□□□ 0.05
VARS-219ENST00000461328 TRIM23P36406 574 aa15.35■□□□□ 0.05
VARS-219ENST00000461328 GPR1P46091 355 aa15.35■□□□□ 0.05
VARS-219ENST00000461328 STC1P52823 247 aa15.35■□□□□ 0.05
VARS-219ENST00000461328 QPCTQ16769 361 aa15.35■□□□□ 0.05
VARS-219ENST00000461328 CDCP2Q5VXM1 449 aa15.35■□□□□ 0.05
VARS-219ENST00000461328 LVRNQ6Q4G3 990 aa15.35■□□□□ 0.05
VARS-219ENST00000461328 PELI3Q8N2H9 469 aa15.35■□□□□ 0.05
VARS-219ENST00000461328 SDR16C5Q8N3Y7 309 aa15.35■□□□□ 0.05
VARS-219ENST00000461328 SPATA22Q8NHS9 363 aa15.35■□□□□ 0.05
VARS-219ENST00000461328 CCHCR1Q8TD31 782 aa15.35■□□□□ 0.05
VARS-219ENST00000461328 HTR3CQ8WXA8 447 aa15.35■□□□□ 0.05
VARS-219ENST00000461328 OR1E3Q8WZA6 343 aa15.35■□□□□ 0.05
VARS-219ENST00000461328 ALG3Q92685 438 aa15.35■□□□□ 0.05
VARS-219ENST00000461328 NAT6Q93015 286 aa15.35■□□□□ 0.05
VARS-219ENST00000461328 AP2M1Q96CW1 435 aa15.35■□□□□ 0.05
VARS-219ENST00000461328 TEKT5Q96M29 485 aa15.35■□□□□ 0.05
VARS-219ENST00000461328 LGR4Q9BXB1 951 aa15.35■□□□□ 0.05
VARS-219ENST00000461328 FGF22Q9HCT0 170 aa15.35■□□□□ 0.05
VARS-219ENST00000461328 UBP1Q9NZI7 540 aa15.35■□□□□ 0.05
VARS-219ENST00000461328 GULP1Q9UBP9 304 aa15.35■□□□□ 0.05
VARS-219ENST00000461328 DGKBQ9Y6T7 804 aa15.35■□□□□ 0.05
VARS-219ENST00000461328 MIF4GDA9UHW6 222 aaKnown RBP15.34■□□□□ 0.05
VARS-219ENST00000461328 TNFRSF10CO14798 259 aa15.34■□□□□ 0.05
VARS-219ENST00000461328 KRT86O43790 486 aa15.34■□□□□ 0.05
VARS-219ENST00000461328 CSO75390 466 aaKnown RBP15.34■□□□□ 0.05
VARS-219ENST00000461328 TJP3O95049 919 aa15.34■□□□□ 0.05
VARS-219ENST00000461328 CLDN7O95471 211 aa15.34■□□□□ 0.05
VARS-219ENST00000461328 MT-CYBP00156 380 aaPredicted RBP15.34■□□□□ 0.05
VARS-219ENST00000461328 NFKB1P19838 968 aa15.34■□□□□ 0.05
VARS-219ENST00000461328 PTPN7P35236 360 aa15.34■□□□□ 0.05
VARS-219ENST00000461328 CDK3Q00526 305 aa15.34■□□□□ 0.05
VARS-219ENST00000461328 OTUD4Q01804 1114 aaKnown RBP15.34■□□□□ 0.05
VARS-219ENST00000461328 CDK18Q07002 472 aa15.34■□□□□ 0.05
VARS-219ENST00000461328 WASHC5Q12768 1159 aa15.34■□□□□ 0.05
VARS-219ENST00000461328 RTP5Q14D33 572 aa15.34■□□□□ 0.05
VARS-219ENST00000461328 NOMO1Q15155 1222 aa15.34■□□□□ 0.05
VARS-219ENST00000461328 KCTD16Q68DU8 428 aa15.34■□□□□ 0.05
VARS-219ENST00000461328 DOK6Q6PKX4 331 aa15.34■□□□□ 0.05
VARS-219ENST00000461328 RFLNAQ6ZTI6 216 aa15.34■□□□□ 0.05
VARS-219ENST00000461328 PID1Q7Z2X4 250 aa15.34■□□□□ 0.05
VARS-219ENST00000461328 CDKL3Q8IVW4 592 aaPredicted RBP15.34■□□□□ 0.05
VARS-219ENST00000461328 ARL10Q8N8L6 244 aa15.34■□□□□ 0.05
VARS-219ENST00000461328 ACTL9Q8TC94 416 aa15.34■□□□□ 0.05
VARS-219ENST00000461328 VAT1Q99536 393 aa15.34■□□□□ 0.05
VARS-219ENST00000461328 FAM118BQ9BPY3 351 aa15.34■□□□□ 0.05
VARS-219ENST00000461328 SYNDIG1Q9H7V2 258 aa15.34■□□□□ 0.05
VARS-219ENST00000461328 CYP4F12Q9HCS2 524 aa15.34■□□□□ 0.05
VARS-219ENST00000461328 MRPL40Q9NQ50 206 aaKnown RBP15.34■□□□□ 0.05
VARS-219ENST00000461328 PKD2L2Q9NZM6 624 aa15.34■□□□□ 0.05
VARS-219ENST00000461328 RSPH14Q9UHP6 348 aa15.34■□□□□ 0.05
VARS-219ENST00000461328 PADI4Q9UM07 663 aa15.34■□□□□ 0.05
VARS-219ENST00000461328 GUCA1BQ9UMX6 200 aa15.34■□□□□ 0.05
VARS-219ENST00000461328 GPR34Q9UPC5 381 aa15.34■□□□□ 0.05
VARS-219ENST00000461328 EFR3BQ9Y2G0 817 aa15.34■□□□□ 0.05
VARS-219ENST00000461328 PCDHB1Q9Y5F3 818 aa15.34■□□□□ 0.05
VARS-219ENST00000461328 ADGRG1Q9Y653 693 aa15.34■□□□□ 0.05
VARS-219ENST00000461328 CAPN6Q9Y6Q1 641 aa15.34■□□□□ 0.05
VARS-219ENST00000461328 GOLGA6L9A6NEM1 432 aa15.33■□□□□ 0.04
VARS-219ENST00000461328 ANKRD66B4E2M5 251 aa15.33■□□□□ 0.04
VARS-219ENST00000461328 STK10O94804 968 aaKnown RBP15.33■□□□□ 0.04
VARS-219ENST00000461328 PIRTP0C851 137 aa15.33■□□□□ 0.04
VARS-219ENST00000461328 PYGMP11217 842 aa15.33■□□□□ 0.04
VARS-219ENST00000461328 EIF3EP60228 445 aaKnown RBP15.33■□□□□ 0.04
VARS-219ENST00000461328 PTSQ03393 145 aa15.33■□□□□ 0.04
VARS-219ENST00000461328 XRCC4Q13426 336 aa15.33■□□□□ 0.04
VARS-219ENST00000461328 SLC14A2Q15849 920 aa15.33■□□□□ 0.04
VARS-219ENST00000461328 PERM1Q5SV97 790 aa15.33■□□□□ 0.04
VARS-219ENST00000461328 AADACL2Q6P093 401 aa15.33■□□□□ 0.04
VARS-219ENST00000461328 C19orf48Q6RUI8 117 aa15.33■□□□□ 0.04
VARS-219ENST00000461328 ZNF765Q7L2R6 523 aa15.33■□□□□ 0.04
VARS-219ENST00000461328 TECPR1Q7Z6L1 1165 aa15.33■□□□□ 0.04
VARS-219ENST00000461328 TAF8Q7Z7C8 310 aa15.33■□□□□ 0.04
VARS-219ENST00000461328 RNF10Q8N5U6 811 aaKnown RBP15.33■□□□□ 0.04
VARS-219ENST00000461328 KYQ8NBH2 561 aa15.33■□□□□ 0.04
VARS-219ENST00000461328 SCAMP4Q969E2 229 aa15.33■□□□□ 0.04
VARS-219ENST00000461328 DCBLD2Q96PD2 775 aa15.33■□□□□ 0.04
VARS-219ENST00000461328 LYSMD1Q96S90 227 aa15.33■□□□□ 0.04
VARS-219ENST00000461328 CCDC3Q9BQI4 270 aa15.33■□□□□ 0.04
VARS-219ENST00000461328 HERPUD2Q9BSE4 406 aa15.33■□□□□ 0.04
VARS-219ENST00000461328 TEX101Q9BY14 249 aa15.33■□□□□ 0.04
VARS-219ENST00000461328 ABCG8Q9H221 673 aa15.33■□□□□ 0.04
VARS-219ENST00000461328 CARS2Q9HA77 564 aaKnown RBP15.33■□□□□ 0.04
VARS-219ENST00000461328 FAM153AQ9UHL3 310 aa15.33■□□□□ 0.04
VARS-219ENST00000461328 TRHDEQ9UKU6 1024 aa15.33■□□□□ 0.04
VARS-219ENST00000461328 GPSM3Q9Y4H4 160 aa15.33■□□□□ 0.04
VARS-219ENST00000461328 MYLKQ15746 1914 aa15.33■□□□□ 0.04
VARS-219ENST00000461328 PKD1L2Q7Z442 2459 aa15.32■□□□□ 0.04
VARS-219ENST00000461328 PRSS38A1L453 326 aa15.32■□□□□ 0.04
VARS-219ENST00000461328 NDST3O95803 873 aa15.32■□□□□ 0.04
VARS-219ENST00000461328 PYGLP06737 847 aa15.32■□□□□ 0.04
VARS-219ENST00000461328 RBL1P28749 1068 aa15.32■□□□□ 0.04
VARS-219ENST00000461328 CD68P34810 354 aaPredicted RBP15.32■□□□□ 0.04
VARS-219ENST00000461328 DPTQ07507 201 aa15.32■□□□□ 0.04
VARS-219ENST00000461328 ITPRIPL1Q6GPH6 555 aa15.32■□□□□ 0.04
VARS-219ENST00000461328 DARS2Q6PI48 645 aaKnown RBP15.32■□□□□ 0.04
VARS-219ENST00000461328 LYSMD3Q7Z3D4 306 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms