RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 CDONQ4KMG0 1287 aa3.86□□□□□ -1.79
CLK1-206ENST00000461326 DNTTIP2Q5QJE6 756 aaKnown RBP3.86□□□□□ -1.79
CLK1-206ENST00000461326 RARS2Q5T160 578 aaKnown RBP3.86□□□□□ -1.79
CLK1-206ENST00000461326 KRT79Q5XKE5 535 aa3.86□□□□□ -1.79
CLK1-206ENST00000461326 CFAP77Q6ZQR2 320 aa3.86□□□□□ -1.79
CLK1-206ENST00000461326 MTSS1LQ765P7 747 aa3.86□□□□□ -1.79
CLK1-206ENST00000461326 TSPAN33Q86UF1 283 aa3.86□□□□□ -1.79
CLK1-206ENST00000461326 NANOGP1Q8N7R0 232 aa3.86□□□□□ -1.79
CLK1-206ENST00000461326 POMGNT2Q8NAT1 580 aa3.86□□□□□ -1.79
CLK1-206ENST00000461326 C7orf57Q8NEG2 295 aa3.86□□□□□ -1.79
CLK1-206ENST00000461326 NSMCE1Q8WV22 266 aa3.86□□□□□ -1.79
CLK1-206ENST00000461326 TRIB2Q92519 343 aa3.86□□□□□ -1.79
CLK1-206ENST00000461326 ELMOD3Q96FG2 381 aa3.86□□□□□ -1.79
CLK1-206ENST00000461326 NUDCD1Q96RS6 583 aa3.86□□□□□ -1.79
CLK1-206ENST00000461326 FIZ1Q96SL8 496 aa3.86□□□□□ -1.79
CLK1-206ENST00000461326 BAG1Q99933 345 aaPredicted RBP3.86□□□□□ -1.79
CLK1-206ENST00000461326 PCGF1Q9BSM1 259 aa3.86□□□□□ -1.79
CLK1-206ENST00000461326 SIL1Q9H173 461 aa3.86□□□□□ -1.79
CLK1-206ENST00000461326 ISCUQ9H1K1 167 aa3.86□□□□□ -1.79
CLK1-206ENST00000461326 MKKSQ9NPJ1 570 aaPredicted RBP3.86□□□□□ -1.79
CLK1-206ENST00000461326 HINT3Q9NQE9 182 aaKnown RBP3.86□□□□□ -1.79
CLK1-206ENST00000461326 SETD4Q9NVD3 440 aa3.86□□□□□ -1.79
CLK1-206ENST00000461326 TMEM51Q9NW97 253 aa3.86□□□□□ -1.79
CLK1-206ENST00000461326 CPSF2Q9P2I0 782 aaKnown RBP3.86□□□□□ -1.79
CLK1-206ENST00000461326 NENFQ9UMX5 172 aa3.86□□□□□ -1.79
CLK1-206ENST00000461326 MAP2K7O14733 419 aa3.85□□□□□ -1.79
CLK1-206ENST00000461326 OGG1O15527 345 aa3.85□□□□□ -1.79
CLK1-206ENST00000461326 ASAP2O43150 1006 aa3.85□□□□□ -1.79
CLK1-206ENST00000461326 ENTPD3O75355 529 aa3.85□□□□□ -1.79
CLK1-206ENST00000461326 SOX30O94993 753 aa3.85□□□□□ -1.79
CLK1-206ENST00000461326 DNTTP04053 509 aa3.85□□□□□ -1.79
CLK1-206ENST00000461326 ADRB2P07550 413 aa3.85□□□□□ -1.79
CLK1-206ENST00000461326 ACADLP28330 430 aa3.85□□□□□ -1.79
CLK1-206ENST00000461326 FASLGP48023 281 aa3.85□□□□□ -1.79
CLK1-206ENST00000461326 IFI35P80217 286 aaPredicted RBP3.85□□□□□ -1.79
CLK1-206ENST00000461326 ECT2LQ008S8 904 aa3.85□□□□□ -1.79
CLK1-206ENST00000461326 BAATQ14032 418 aaPredicted RBP3.85□□□□□ -1.79
CLK1-206ENST00000461326 PTGR1Q14914 329 aa3.85□□□□□ -1.79
CLK1-206ENST00000461326 PSMD6Q15008 389 aa3.85□□□□□ -1.79
CLK1-206ENST00000461326 WASHC2DQ5SRD0 308 aa3.85□□□□□ -1.79
CLK1-206ENST00000461326 GARNL3Q5VVW2 1013 aa3.85□□□□□ -1.79
CLK1-206ENST00000461326 SIGIRRQ6IA17 410 aa3.85□□□□□ -1.79
CLK1-206ENST00000461326 KIAA0930Q6ICG6 404 aaPredicted RBP3.85□□□□□ -1.79
CLK1-206ENST00000461326 FBXO46Q6PJ61 603 aaPredicted RBP3.85□□□□□ -1.79
CLK1-206ENST00000461326 SHFQ7M4L6 423 aa3.85□□□□□ -1.79
CLK1-206ENST00000461326 KRT77Q7Z794 578 aa3.85□□□□□ -1.79
CLK1-206ENST00000461326 DNAAF5Q86Y56 855 aa3.85□□□□□ -1.79
CLK1-206ENST00000461326 ARID3BQ8IVW6 561 aaPredicted RBP3.85□□□□□ -1.79
CLK1-206ENST00000461326 ZKSCAN4Q969J2 545 aaPredicted RBP3.85□□□□□ -1.79
CLK1-206ENST00000461326 IGSF8Q969P0 613 aa3.85□□□□□ -1.79
CLK1-206ENST00000461326 LRFN5Q96NI6 719 aa3.85□□□□□ -1.79
CLK1-206ENST00000461326 ACOX2Q99424 681 aa3.85□□□□□ -1.79
CLK1-206ENST00000461326 KIFC3Q9BVG8 833 aa3.85□□□□□ -1.79
CLK1-206ENST00000461326 HRH4Q9H3N8 390 aa3.85□□□□□ -1.79
CLK1-206ENST00000461326 SLC28A3Q9HAS3 691 aa3.85□□□□□ -1.79
CLK1-206ENST00000461326 CLK4Q9HAZ1 481 aaKnown RBP3.85□□□□□ -1.79
CLK1-206ENST00000461326 PDE7BQ9NP56 450 aa3.85□□□□□ -1.79
CLK1-206ENST00000461326 GPR108Q9NPR9 543 aa3.85□□□□□ -1.79
CLK1-206ENST00000461326 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.85□□□□□ -1.79
CLK1-206ENST00000461326 POT1Q9NUX5 634 aa3.85□□□□□ -1.79
CLK1-206ENST00000461326 OR6C3Q9NZP0 311 aa3.85□□□□□ -1.79
CLK1-206ENST00000461326 NFKBIL1Q9UBC1 381 aaPredicted RBP3.85□□□□□ -1.79
CLK1-206ENST00000461326 LY6G6EA0A0G2JKS1 128 aa3.84□□□□□ -1.79
CLK1-206ENST00000461326 OR2A25A4D2G3 310 aa3.84□□□□□ -1.79
CLK1-206ENST00000461326 IFNL4K9M1U5 179 aa3.84□□□□□ -1.79
CLK1-206ENST00000461326 SH2B2O14492 632 aaPredicted RBP3.84□□□□□ -1.79
CLK1-206ENST00000461326 SOCS2O14508 198 aa3.84□□□□□ -1.79
CLK1-206ENST00000461326 VCYO14598 125 aa3.84□□□□□ -1.79
CLK1-206ENST00000461326 ITM2AO43736 263 aa3.84□□□□□ -1.79
CLK1-206ENST00000461326 FTCDO95954 541 aa3.84□□□□□ -1.79
CLK1-206ENST00000461326 CYP1A2P05177 515 aa3.84□□□□□ -1.79
CLK1-206ENST00000461326 PRF1P14222 555 aa3.84□□□□□ -1.79
CLK1-206ENST00000461326 NAGAP17050 411 aa3.84□□□□□ -1.79
CLK1-206ENST00000461326 RRM1P23921 792 aa3.84□□□□□ -1.79
CLK1-206ENST00000461326 HSD17B4P51659 736 aa3.84□□□□□ -1.79
CLK1-206ENST00000461326 STAT2P52630 851 aa3.84□□□□□ -1.79
CLK1-206ENST00000461326 P2RX3P56373 397 aa3.84□□□□□ -1.79
CLK1-206ENST00000461326 ROR2Q01974 943 aaKnown RBP3.84□□□□□ -1.79
CLK1-206ENST00000461326 PRPF4BQ13523 1007 aaKnown RBP3.84□□□□□ -1.79
CLK1-206ENST00000461326 PCLAFQ15004 111 aa3.84□□□□□ -1.79
CLK1-206ENST00000461326 RASA2Q15283 850 aa3.84□□□□□ -1.79
CLK1-206ENST00000461326 PNLIPRP3Q17RR3 467 aa3.84□□□□□ -1.79
CLK1-206ENST00000461326 TMEM266Q2M3C6 531 aa3.84□□□□□ -1.79
CLK1-206ENST00000461326 ZNF284Q2VY69 593 aa3.84□□□□□ -1.79
CLK1-206ENST00000461326 FRG2Q64ET8 278 aa3.84□□□□□ -1.79
CLK1-206ENST00000461326 PDXDC1Q6P996 788 aa3.84□□□□□ -1.79
CLK1-206ENST00000461326 MEPCEQ7L2J0 689 aaKnown RBP3.84□□□□□ -1.79
CLK1-206ENST00000461326 CCDC13Q8IYE1 715 aa3.84□□□□□ -1.79
CLK1-206ENST00000461326 DSELQ8IZU8 1212 aa3.84□□□□□ -1.79
CLK1-206ENST00000461326 SPATA6LQ8N4H0 392 aa3.84□□□□□ -1.79
CLK1-206ENST00000461326 TMEM199Q8N511 208 aa3.84□□□□□ -1.79
CLK1-206ENST00000461326 AADATQ8N5Z0 425 aa3.84□□□□□ -1.79
CLK1-206ENST00000461326 SYT2Q8N9I0 419 aaPredicted RBP3.84□□□□□ -1.79
CLK1-206ENST00000461326 AVL9Q8NBF6 648 aa3.84□□□□□ -1.79
CLK1-206ENST00000461326 MCUQ8NE86 351 aa3.84□□□□□ -1.79
CLK1-206ENST00000461326 OR14L1PQ8NHC6 308 aa3.84□□□□□ -1.79
CLK1-206ENST00000461326 ARRDC2Q8TBH0 407 aa3.84□□□□□ -1.79
CLK1-206ENST00000461326 INPP5DQ92835 1189 aa3.84□□□□□ -1.79
CLK1-206ENST00000461326 ERGIC1Q969X5 290 aa3.84□□□□□ -1.79
CLK1-206ENST00000461326 LRRC59Q96AG4 307 aaKnown RBP3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms