RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 ARHGEF37A1IGU5 675 aa3□□□□□ -1.93
HPS3-203ENST00000460822 DPPA5A6NC42 116 aa3□□□□□ -1.93
HPS3-203ENST00000460822 RHODO00212 210 aa3□□□□□ -1.93
HPS3-203ENST00000460822 PSMA7O14818 248 aa3□□□□□ -1.93
HPS3-203ENST00000460822 ATP2A1O14983 1001 aa3□□□□□ -1.93
HPS3-203ENST00000460822 OGG1O15527 345 aa3□□□□□ -1.93
HPS3-203ENST00000460822 SPRY1O43609 319 aaPredicted RBP3□□□□□ -1.93
HPS3-203ENST00000460822 GPC4O75487 556 aa3□□□□□ -1.93
HPS3-203ENST00000460822 SLCO2B1O94956 709 aa3□□□□□ -1.93
HPS3-203ENST00000460822 FTCDO95954 541 aa3□□□□□ -1.93
HPS3-203ENST00000460822 BCL10O95999 233 aa3□□□□□ -1.93
HPS3-203ENST00000460822 WNT1P04628 370 aa3□□□□□ -1.93
HPS3-203ENST00000460822 PTMAP06454 111 aaKnown RBP3□□□□□ -1.93
HPS3-203ENST00000460822 CHRM5P08912 532 aaPredicted RBP3□□□□□ -1.93
HPS3-203ENST00000460822 NHLRC4P0CG21 123 aaPredicted RBP3□□□□□ -1.93
HPS3-203ENST00000460822 TFPIP10646 304 aa3□□□□□ -1.93
HPS3-203ENST00000460822 CYP2A6P11509 494 aaPredicted RBP3□□□□□ -1.93
HPS3-203ENST00000460822 TFEBP19484 476 aa3□□□□□ -1.93
HPS3-203ENST00000460822 ACADLP28330 430 aa3□□□□□ -1.93
HPS3-203ENST00000460822 CCR10P46092 362 aa3□□□□□ -1.93
HPS3-203ENST00000460822 GPR12P47775 334 aa3□□□□□ -1.93
HPS3-203ENST00000460822 CCR3P51677 355 aa3□□□□□ -1.93
HPS3-203ENST00000460822 SLC12A2P55011 1212 aa3□□□□□ -1.93
HPS3-203ENST00000460822 CXCL9Q07325 125 aa3□□□□□ -1.93
HPS3-203ENST00000460822 ITGADQ13349 1161 aa3□□□□□ -1.93
HPS3-203ENST00000460822 TNIP1Q15025 636 aa3□□□□□ -1.93
HPS3-203ENST00000460822 CERKLQ49MI3 558 aaPredicted RBP3□□□□□ -1.93
HPS3-203ENST00000460822 ESCO2Q56NI9 601 aa3□□□□□ -1.93
HPS3-203ENST00000460822 DNAJC21Q5F1R6 531 aaKnown RBP3□□□□□ -1.93
HPS3-203ENST00000460822 FCRLBQ6BAA4 426 aa3□□□□□ -1.93
HPS3-203ENST00000460822 RAPH1Q70E73 1250 aa3□□□□□ -1.93
HPS3-203ENST00000460822 TMC8Q8IU68 726 aa3□□□□□ -1.93
HPS3-203ENST00000460822 DENND6AQ8IWF6 608 aa3□□□□□ -1.93
HPS3-203ENST00000460822 HSCBQ8IWL3 235 aa3□□□□□ -1.93
HPS3-203ENST00000460822 SRRM1Q8IYB3 904 aaKnown RBP3□□□□□ -1.93
HPS3-203ENST00000460822 PARP16Q8N5Y8 322 aa3□□□□□ -1.93
HPS3-203ENST00000460822 DPP10Q8N608 796 aa3□□□□□ -1.93
HPS3-203ENST00000460822 PNLDC1Q8NA58 520 aaKnown RBP3□□□□□ -1.93
HPS3-203ENST00000460822 XXYLT1Q8NBI6 393 aa3□□□□□ -1.93
HPS3-203ENST00000460822 TEKT4Q8WW24 435 aa3□□□□□ -1.93
HPS3-203ENST00000460822 IGSF8Q969P0 613 aa3□□□□□ -1.93
HPS3-203ENST00000460822 FBXL8Q96CD0 374 aa3□□□□□ -1.93
HPS3-203ENST00000460822 RRNAD1Q96FB5 475 aaKnown RBP3□□□□□ -1.93
HPS3-203ENST00000460822 PPP1R13BQ96KQ4 1090 aa3□□□□□ -1.93
HPS3-203ENST00000460822 CDRT15Q96T59 188 aa3□□□□□ -1.93
HPS3-203ENST00000460822 MVB12BQ9H7P6 319 aa3□□□□□ -1.93
HPS3-203ENST00000460822 CWC15Q9P013 229 aaKnown RBP3□□□□□ -1.93
HPS3-203ENST00000460822 CRNNQ9UBG3 495 aaPredicted RBP3□□□□□ -1.93
HPS3-203ENST00000460822 SERGEFQ9UGK8 458 aa3□□□□□ -1.93
HPS3-203ENST00000460822 NDRG3Q9UGV2 375 aa3□□□□□ -1.93
HPS3-203ENST00000460822 TUBE1Q9UJT0 475 aa3□□□□□ -1.93
HPS3-203ENST00000460822 OSGIN1Q9UJX0 560 aa3□□□□□ -1.93
HPS3-203ENST00000460822 EXO1Q9UQ84 846 aaKnown RBP3□□□□□ -1.93
HPS3-203ENST00000460822 ZNF148Q9UQR1 794 aa3□□□□□ -1.93
HPS3-203ENST00000460822 KNSTRNQ9Y448 316 aa3□□□□□ -1.93
HPS3-203ENST00000460822 TCRBV21S2A2A0A5A6 115 aa3□□□□□ -1.93
HPS3-203ENST00000460822 MANSC4A6NHS7 340 aaPredicted RBP3□□□□□ -1.93
HPS3-203ENST00000460822 FOXO6A8MYZ6 492 aa3□□□□□ -1.93
HPS3-203ENST00000460822 RTCAO00442 366 aaKnown RBP3□□□□□ -1.93
HPS3-203ENST00000460822 ZC3H11AO75152 810 aaKnown RBP eCLIP3□□□□□ -1.93
HPS3-203ENST00000460822 JRKO75564 520 aa3□□□□□ -1.93
HPS3-203ENST00000460822 RECQL5O94762 991 aaPredicted RBP3□□□□□ -1.93
HPS3-203ENST00000460822 MT-ND3P03897 115 aa3□□□□□ -1.93
HPS3-203ENST00000460822 PRKCGP05129 697 aa3□□□□□ -1.93
HPS3-203ENST00000460822 FYNP06241 537 aa3□□□□□ -1.93
HPS3-203ENST00000460822 TPOP07202 933 aa3□□□□□ -1.93
HPS3-203ENST00000460822 THEGLP0DJG4 465 aa3□□□□□ -1.93
HPS3-203ENST00000460822 STMN1P16949 149 aa3□□□□□ -1.93
HPS3-203ENST00000460822 ERCC2P18074 760 aa3□□□□□ -1.93
HPS3-203ENST00000460822 MATR3P43243 847 aaKnown RBP eCLIP3□□□□□ -1.93
HPS3-203ENST00000460822 NPY4RP50391 375 aa3□□□□□ -1.93
HPS3-203ENST00000460822 POLGP54098 1239 aaPredicted RBP3□□□□□ -1.93
HPS3-203ENST00000460822 AP1B1Q10567 949 aa3□□□□□ -1.93
HPS3-203ENST00000460822 SLC10A2Q12908 348 aaPredicted RBP3□□□□□ -1.93
HPS3-203ENST00000460822 NAE1Q13564 534 aa3□□□□□ -1.93
HPS3-203ENST00000460822 NFE2L1Q14494 772 aa3□□□□□ -1.93
HPS3-203ENST00000460822 SLMAPQ14BN4 828 aa3□□□□□ -1.93
HPS3-203ENST00000460822 ARHGEF6Q15052 776 aa3□□□□□ -1.93
HPS3-203ENST00000460822 HYAL4Q2M3T9 481 aa3□□□□□ -1.93
HPS3-203ENST00000460822 SOWAHAQ2M3V2 549 aa3□□□□□ -1.93
HPS3-203ENST00000460822 SOWAHCQ53LP3 525 aaPredicted RBP3□□□□□ -1.93
HPS3-203ENST00000460822 SGO1Q5FBB7 561 aa3□□□□□ -1.93
HPS3-203ENST00000460822 RARS2Q5T160 578 aaKnown RBP3□□□□□ -1.93
HPS3-203ENST00000460822 C6orf163Q5TEZ5 329 aa3□□□□□ -1.93
HPS3-203ENST00000460822 C11orf88Q6PI97 169 aa3□□□□□ -1.93
HPS3-203ENST00000460822 RBPMS2Q6ZRY4 209 aaKnown RBP3□□□□□ -1.93
HPS3-203ENST00000460822 TAOK1Q7L7X3 1001 aa3□□□□□ -1.93
HPS3-203ENST00000460822 IQCHQ86VS3 1027 aa3□□□□□ -1.93
HPS3-203ENST00000460822 GUF1Q8N442 669 aaKnown RBP3□□□□□ -1.93
HPS3-203ENST00000460822 RBM15BQ8NDT2 890 aaKnown RBP3□□□□□ -1.93
HPS3-203ENST00000460822 BEST2Q8NFU1 509 aa3□□□□□ -1.93
HPS3-203ENST00000460822 OR8K5Q8NH50 307 aa3□□□□□ -1.93
HPS3-203ENST00000460822 MOSPD2Q8NHP6 518 aa3□□□□□ -1.93
HPS3-203ENST00000460822 OSR1Q8TAX0 266 aaPredicted RBP3□□□□□ -1.93
HPS3-203ENST00000460822 SETD6Q8TBK2 473 aa3□□□□□ -1.93
HPS3-203ENST00000460822 SMG7Q92540 1137 aaKnown RBP3□□□□□ -1.93
HPS3-203ENST00000460822 LPGAT1Q92604 370 aa3□□□□□ -1.93
HPS3-203ENST00000460822 SNAPC3Q92966 411 aa3□□□□□ -1.93
HPS3-203ENST00000460822 CCDC47Q96A33 483 aaKnown RBP3□□□□□ -1.93
HPS3-203ENST00000460822 MOAP1Q96BY2 351 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms