RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 COPS2P61201 443 aa13.68□□□□□ -0.22
SCAMP4-206ENST00000460767 YPEL5P62699 121 aa13.68□□□□□ -0.22
SCAMP4-206ENST00000460767 RALGDSQ12967 914 aa13.68□□□□□ -0.22
SCAMP4-206ENST00000460767 PRKD1Q15139 912 aaPredicted RBP13.68□□□□□ -0.22
SCAMP4-206ENST00000460767 TGIF1Q15583 401 aa13.68□□□□□ -0.22
SCAMP4-206ENST00000460767 TMEM52BQ4KMG9 183 aa13.68□□□□□ -0.22
SCAMP4-206ENST00000460767 TFDP3Q5H9I0 405 aa13.68□□□□□ -0.22
SCAMP4-206ENST00000460767 MARC1Q5VT66 337 aa13.68□□□□□ -0.22
SCAMP4-206ENST00000460767 TIGD7Q6NT04 549 aaPredicted RBP13.68□□□□□ -0.22
SCAMP4-206ENST00000460767 MACC1Q6ZN28 852 aa13.68□□□□□ -0.22
SCAMP4-206ENST00000460767 B3GNT8Q7Z7M8 397 aa13.68□□□□□ -0.22
SCAMP4-206ENST00000460767 PHACTR4Q8IZ21 702 aa13.68□□□□□ -0.22
SCAMP4-206ENST00000460767 RCOR2Q8IZ40 523 aa13.68□□□□□ -0.22
SCAMP4-206ENST00000460767 FSTL5Q8N475 847 aaPredicted RBP13.68□□□□□ -0.22
SCAMP4-206ENST00000460767 RYBPQ8N488 228 aaPredicted RBP13.68□□□□□ -0.22
SCAMP4-206ENST00000460767 RNF10Q8N5U6 811 aaKnown RBP13.68□□□□□ -0.22
SCAMP4-206ENST00000460767 ZSCAN1Q8NBB4 408 aa13.68□□□□□ -0.22
SCAMP4-206ENST00000460767 OR6C4Q8NGE1 309 aa13.68□□□□□ -0.22
SCAMP4-206ENST00000460767 RNF25Q96BH1 459 aaPredicted RBP13.68□□□□□ -0.22
SCAMP4-206ENST00000460767 GFM1Q96RP9 751 aaKnown RBP13.68□□□□□ -0.22
SCAMP4-206ENST00000460767 ATP13A3Q9H7F0 1226 aa13.68□□□□□ -0.22
SCAMP4-206ENST00000460767 ITM2BQ9Y287 266 aa13.68□□□□□ -0.22
SCAMP4-206ENST00000460767 CAPN6Q9Y6Q1 641 aa13.68□□□□□ -0.22
SCAMP4-206ENST00000460767 TLN1Q9Y490 2541 aaKnown RBP13.68□□□□□ -0.22
SCAMP4-206ENST00000460767 LRP4O75096 1905 aa13.68□□□□□ -0.22
SCAMP4-206ENST00000460767 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.67□□□□□ -0.22
SCAMP4-206ENST00000460767 CCDC66A2RUB6 948 aa13.67□□□□□ -0.22
SCAMP4-206ENST00000460767 CFAP69A5D8W1 941 aa13.67□□□□□ -0.22
SCAMP4-206ENST00000460767 APOL1O14791 398 aa13.67□□□□□ -0.22
SCAMP4-206ENST00000460767 MMP2P08253 660 aa13.67□□□□□ -0.22
SCAMP4-206ENST00000460767 CCNB1P14635 433 aa13.67□□□□□ -0.22
SCAMP4-206ENST00000460767 ITIH2P19823 946 aa13.67□□□□□ -0.22
SCAMP4-206ENST00000460767 SERPINA4P29622 427 aa13.67□□□□□ -0.22
SCAMP4-206ENST00000460767 SCNN1BP51168 640 aa13.67□□□□□ -0.22
SCAMP4-206ENST00000460767 FOXK1P85037 733 aa13.67□□□□□ -0.22
SCAMP4-206ENST00000460767 KIF5AQ12840 1032 aa13.67□□□□□ -0.22
SCAMP4-206ENST00000460767 TRAF2Q12933 501 aa13.67□□□□□ -0.22
SCAMP4-206ENST00000460767 ZBTB17Q13105 803 aa13.67□□□□□ -0.22
SCAMP4-206ENST00000460767 SRSF6Q13247 344 aaKnown RBP13.67□□□□□ -0.22
SCAMP4-206ENST00000460767 PRRT3Q5FWE3 981 aa13.67□□□□□ -0.22
SCAMP4-206ENST00000460767 MANEAQ5SRI9 462 aa13.67□□□□□ -0.22
SCAMP4-206ENST00000460767 NPNTQ6UXI9 565 aa13.67□□□□□ -0.22
SCAMP4-206ENST00000460767 BBS12Q6ZW61 710 aa13.67□□□□□ -0.22
SCAMP4-206ENST00000460767 CCDC13Q8IYE1 715 aa13.67□□□□□ -0.22
SCAMP4-206ENST00000460767 RBFAQ8N0V3 343 aa13.67□□□□□ -0.22
SCAMP4-206ENST00000460767 KIAA1524Q8TCG1 905 aa13.67□□□□□ -0.22
SCAMP4-206ENST00000460767 CENPTQ96BT3 561 aa13.67□□□□□ -0.22
SCAMP4-206ENST00000460767 HES6Q96HZ4 224 aa13.67□□□□□ -0.22
SCAMP4-206ENST00000460767 PDLIM2Q96JY6 352 aa13.67□□□□□ -0.22
SCAMP4-206ENST00000460767 MCCC1Q96RQ3 725 aaPredicted RBP13.67□□□□□ -0.22
SCAMP4-206ENST00000460767 CLPBQ9H078 707 aa13.67□□□□□ -0.22
SCAMP4-206ENST00000460767 BRD8Q9H0E9 1235 aa13.67□□□□□ -0.22
SCAMP4-206ENST00000460767 EPB41L5Q9HCM4 733 aa13.67□□□□□ -0.22
SCAMP4-206ENST00000460767 PCDH12Q9NPG4 1184 aa13.67□□□□□ -0.22
SCAMP4-206ENST00000460767 IGSF5Q9NSI5 407 aa13.67□□□□□ -0.22
SCAMP4-206ENST00000460767 PNMA8BQ9ULN7 279 aaPredicted RBP13.67□□□□□ -0.22
SCAMP4-206ENST00000460767 A0A1W2PQM1 296 aa13.66□□□□□ -0.22
SCAMP4-206ENST00000460767 TTC24A2A3L6 582 aaPredicted RBP13.66□□□□□ -0.22
SCAMP4-206ENST00000460767 CASC3O15234 703 aaKnown RBP13.66□□□□□ -0.22
SCAMP4-206ENST00000460767 YY2O15391 372 aa13.66□□□□□ -0.22
SCAMP4-206ENST00000460767 DDX3YO15523 660 aaKnown RBP13.66□□□□□ -0.22
SCAMP4-206ENST00000460767 CST8O60676 142 aa13.66□□□□□ -0.22
SCAMP4-206ENST00000460767 PRLP01236 227 aa13.66□□□□□ -0.22
SCAMP4-206ENST00000460767 HLA-DQB2P05538 268 aa13.66□□□□□ -0.22
SCAMP4-206ENST00000460767 JMJD7P0C870 316 aa13.66□□□□□ -0.22
SCAMP4-206ENST00000460767 BLKP51451 505 aa13.66□□□□□ -0.22
SCAMP4-206ENST00000460767 THOP1P52888 689 aa13.66□□□□□ -0.22
SCAMP4-206ENST00000460767 MAXP61244 160 aa13.66□□□□□ -0.22
SCAMP4-206ENST00000460767 ZFP36L1Q07352 338 aaKnown RBP13.66□□□□□ -0.22
SCAMP4-206ENST00000460767 NIPAL4Q0D2K0 466 aa13.66□□□□□ -0.22
SCAMP4-206ENST00000460767 SGCGQ13326 291 aa13.66□□□□□ -0.22
SCAMP4-206ENST00000460767 TFDP2Q14188 446 aa13.66□□□□□ -0.22
SCAMP4-206ENST00000460767 ZNF235Q14590 738 aa13.66□□□□□ -0.22
SCAMP4-206ENST00000460767 PDK1Q15118 436 aa13.66□□□□□ -0.22
SCAMP4-206ENST00000460767 LRRC73Q5JTD7 316 aa13.66□□□□□ -0.22
SCAMP4-206ENST00000460767 KIAA1328Q86T90 577 aa13.66□□□□□ -0.22
SCAMP4-206ENST00000460767 TTC7BQ86TV6 843 aa13.66□□□□□ -0.22
SCAMP4-206ENST00000460767 JAMLQ86YT9 394 aa13.66□□□□□ -0.22
SCAMP4-206ENST00000460767 LRRN4Q8WUT4 740 aa13.66□□□□□ -0.22
SCAMP4-206ENST00000460767 UBE2Q2Q8WVN8 375 aa13.66□□□□□ -0.22
SCAMP4-206ENST00000460767 PIH1D2Q8WWB5 315 aa13.66□□□□□ -0.22
SCAMP4-206ENST00000460767 HTR3CQ8WXA8 447 aa13.66□□□□□ -0.22
SCAMP4-206ENST00000460767 RBM41Q96IZ5 413 aaKnown RBP13.66□□□□□ -0.22
SCAMP4-206ENST00000460767 SLC13A1Q9BZW2 595 aa13.66□□□□□ -0.22
SCAMP4-206ENST00000460767 POLR1EQ9GZS1 481 aaKnown RBP13.66□□□□□ -0.22
SCAMP4-206ENST00000460767 TCEAL2Q9H3H9 227 aaPredicted RBP13.66□□□□□ -0.22
SCAMP4-206ENST00000460767 SAE1Q9UBE0 346 aaPredicted RBP13.66□□□□□ -0.22
SCAMP4-206ENST00000460767 LOXL2Q9Y4K0 774 aa13.66□□□□□ -0.22
SCAMP4-206ENST00000460767 A0A1W2PQ67 120 aa13.65□□□□□ -0.22
SCAMP4-206ENST00000460767 IGLON5A6NGN9 336 aa13.65□□□□□ -0.22
SCAMP4-206ENST00000460767 GOLGA6L6A8MZA4 724 aa13.65□□□□□ -0.22
SCAMP4-206ENST00000460767 PGLSO95336 258 aa13.65□□□□□ -0.22
SCAMP4-206ENST00000460767 ALPIP09923 528 aa13.65□□□□□ -0.22
SCAMP4-206ENST00000460767 PYGMP11217 842 aa13.65□□□□□ -0.22
SCAMP4-206ENST00000460767 PNLIPP16233 465 aa13.65□□□□□ -0.22
SCAMP4-206ENST00000460767 TSHRP16473 764 aa13.65□□□□□ -0.22
SCAMP4-206ENST00000460767 CES1P23141 567 aa13.65□□□□□ -0.22
SCAMP4-206ENST00000460767 CASRP41180 1078 aa13.65□□□□□ -0.22
SCAMP4-206ENST00000460767 BCL2L1Q07817 233 aa13.65□□□□□ -0.22
SCAMP4-206ENST00000460767 WASHC5Q12768 1159 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms