RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 ISG20Q96AZ6 181 aaKnown RBP10.34□□□□□ -0.75
USP39-210ENST00000459775 EID2BQ96D98 161 aa10.34□□□□□ -0.75
USP39-210ENST00000459775 FEM1CQ96JP0 617 aa10.34□□□□□ -0.75
USP39-210ENST00000459775 ZIM3Q96PE6 472 aa10.34□□□□□ -0.75
USP39-210ENST00000459775 EBNA1BP2Q99848 306 aaKnown RBP10.34□□□□□ -0.75
USP39-210ENST00000459775 CEP44Q9C0F1 390 aa10.34□□□□□ -0.75
USP39-210ENST00000459775 PABPC3Q9H361 631 aaKnown RBP10.34□□□□□ -0.75
USP39-210ENST00000459775 SUV39H2Q9H5I1 410 aa10.34□□□□□ -0.75
USP39-210ENST00000459775 PRSS16Q9NQE7 514 aa10.34□□□□□ -0.75
USP39-210ENST00000459775 BFARQ9NZS9 450 aa10.34□□□□□ -0.75
USP39-210ENST00000459775 PNMA8BQ9ULN7 279 aaPredicted RBP10.34□□□□□ -0.75
USP39-210ENST00000459775 PRELID1Q9Y255 219 aa10.34□□□□□ -0.75
USP39-210ENST00000459775 PLAAQ9Y263 795 aa10.34□□□□□ -0.75
USP39-210ENST00000459775 MAGED1Q9Y5V3 778 aaPredicted RBP10.34□□□□□ -0.75
USP39-210ENST00000459775 COL4A2P08572 1712 aa10.33□□□□□ -0.76
USP39-210ENST00000459775 KIAA1549LQ6ZVL6 1849 aa10.33□□□□□ -0.76
USP39-210ENST00000459775 CXorf49A8MYA2 514 aaPredicted RBP10.33□□□□□ -0.76
USP39-210ENST00000459775 ANKRD66B4E2M5 251 aa10.33□□□□□ -0.76
USP39-210ENST00000459775 UGT1A9O60656 530 aa10.33□□□□□ -0.76
USP39-210ENST00000459775 KLHL41O60662 606 aa10.33□□□□□ -0.76
USP39-210ENST00000459775 RNF40O75150 1001 aa10.33□□□□□ -0.76
USP39-210ENST00000459775 ZNF254O75437 659 aa10.33□□□□□ -0.76
USP39-210ENST00000459775 ZNF189O75820 626 aaPredicted RBP10.33□□□□□ -0.76
USP39-210ENST00000459775 KLF8O95600 359 aaPredicted RBP10.33□□□□□ -0.76
USP39-210ENST00000459775 GSRP00390 522 aa10.33□□□□□ -0.76
USP39-210ENST00000459775 RECQLP46063 649 aaPredicted RBP10.33□□□□□ -0.76
USP39-210ENST00000459775 SLCO1A2P46721 670 aa10.33□□□□□ -0.76
USP39-210ENST00000459775 MASP1P48740 699 aa10.33□□□□□ -0.76
USP39-210ENST00000459775 AP1S1P61966 158 aa10.33□□□□□ -0.76
USP39-210ENST00000459775 AP2B1P63010 937 aa10.33□□□□□ -0.76
USP39-210ENST00000459775 PPARDQ03181 441 aa10.33□□□□□ -0.76
USP39-210ENST00000459775 ARMC12Q5T9G4 340 aa10.33□□□□□ -0.76
USP39-210ENST00000459775 ESRP1Q6NXG1 681 aaKnown RBP10.33□□□□□ -0.76
USP39-210ENST00000459775 RFLNAQ6ZTI6 216 aa10.33□□□□□ -0.76
USP39-210ENST00000459775 LINC00523Q86TU6 105 aa10.33□□□□□ -0.76
USP39-210ENST00000459775 HEPHQ9BQS7 1158 aa10.33□□□□□ -0.76
USP39-210ENST00000459775 FOXQ1Q9C009 403 aa10.33□□□□□ -0.76
USP39-210ENST00000459775 ATP13A3Q9H7F0 1226 aa10.33□□□□□ -0.76
USP39-210ENST00000459775 UGT1A7Q9HAW7 530 aa10.33□□□□□ -0.76
USP39-210ENST00000459775 UGT1A10Q9HAW8 530 aa10.33□□□□□ -0.76
USP39-210ENST00000459775 UGT1A8Q9HAW9 530 aa10.33□□□□□ -0.76
USP39-210ENST00000459775 BPIFA1Q9NP55 256 aa10.33□□□□□ -0.76
USP39-210ENST00000459775 SMYD2Q9NRG4 433 aa10.33□□□□□ -0.76
USP39-210ENST00000459775 MRGBPQ9NV56 204 aa10.33□□□□□ -0.76
USP39-210ENST00000459775 GGT7Q9UJ14 662 aa10.33□□□□□ -0.76
USP39-210ENST00000459775 ITGB1BP2Q9UKP3 347 aa10.33□□□□□ -0.76
USP39-210ENST00000459775 DUSP12Q9UNI6 340 aa10.33□□□□□ -0.76
USP39-210ENST00000459775 KPNA3O00505 521 aaPredicted RBP10.33□□□□□ -0.76
USP39-210ENST00000459775 PSMD3O43242 534 aa10.33□□□□□ -0.76
USP39-210ENST00000459775 HTRA2O43464 458 aaPredicted RBP10.33□□□□□ -0.76
USP39-210ENST00000459775 PAHP00439 452 aa10.33□□□□□ -0.76
USP39-210ENST00000459775 IL1BP01584 269 aa10.33□□□□□ -0.76
USP39-210ENST00000459775 MLNP12872 115 aa10.33□□□□□ -0.76
USP39-210ENST00000459775 HNF1BP35680 557 aa10.33□□□□□ -0.76
USP39-210ENST00000459775 ARSDP51689 593 aa10.33□□□□□ -0.76
USP39-210ENST00000459775 EPHB1P54762 984 aa10.33□□□□□ -0.76
USP39-210ENST00000459775 GRSF1Q12849 480 aaKnown RBP eCLIP10.33□□□□□ -0.76
USP39-210ENST00000459775 SP140Q13342 867 aa10.33□□□□□ -0.76
USP39-210ENST00000459775 CRYMQ14894 314 aa10.33□□□□□ -0.76
USP39-210ENST00000459775 GDPD4Q6W3E5 623 aa10.33□□□□□ -0.76
USP39-210ENST00000459775 OR13C4Q8NGS5 318 aa10.33□□□□□ -0.76
USP39-210ENST00000459775 RPLP0P6Q8NHW5 317 aa10.33□□□□□ -0.76
USP39-210ENST00000459775 FBF1Q8TES7 1133 aa10.33□□□□□ -0.76
USP39-210ENST00000459775 UCMAQ8WVF2 138 aa10.33□□□□□ -0.76
USP39-210ENST00000459775 DNASE1L2Q92874 299 aa10.33□□□□□ -0.76
USP39-210ENST00000459775 FAM129AQ9BZQ8 928 aa10.33□□□□□ -0.76
USP39-210ENST00000459775 SLC2A4RGQ9NR83 387 aa10.33□□□□□ -0.76
USP39-210ENST00000459775 IL36AQ9UHA7 158 aa10.33□□□□□ -0.76
USP39-210ENST00000459775 STARD13Q9Y3M8 1113 aa10.33□□□□□ -0.76
USP39-210ENST00000459775 NFS1Q9Y697 457 aa10.33□□□□□ -0.76
USP39-210ENST00000459775 TCRBV9S1A1TA0A576 114 aa10.32□□□□□ -0.76
USP39-210ENST00000459775 TRIM64A6NGJ6 449 aa10.32□□□□□ -0.76
USP39-210ENST00000459775 OR51F1A6NGY5 319 aa10.32□□□□□ -0.76
USP39-210ENST00000459775 NPIPB15A6NHN6 443 aaPredicted RBP10.32□□□□□ -0.76
USP39-210ENST00000459775 TRIM64BA6NI03 449 aa10.32□□□□□ -0.76
USP39-210ENST00000459775 AGPSO00116 658 aa10.32□□□□□ -0.76
USP39-210ENST00000459775 GPR39O43194 453 aa10.32□□□□□ -0.76
USP39-210ENST00000459775 LDB2O43679 373 aa10.32□□□□□ -0.76
USP39-210ENST00000459775 OPA1O60313 960 aa10.32□□□□□ -0.76
USP39-210ENST00000459775 FAM155BO75949 473 aa10.32□□□□□ -0.76
USP39-210ENST00000459775 PRSS56P0CW18 603 aa10.32□□□□□ -0.76
USP39-210ENST00000459775 ERVK-10P10266 1014 aa10.32□□□□□ -0.76
USP39-210ENST00000459775 SERPINA4P29622 427 aa10.32□□□□□ -0.76
USP39-210ENST00000459775 TNFRSF4P43489 277 aa10.32□□□□□ -0.76
USP39-210ENST00000459775 STT3AP46977 705 aa10.32□□□□□ -0.76
USP39-210ENST00000459775 PSMD8P48556 350 aa10.32□□□□□ -0.76
USP39-210ENST00000459775 CSNK1DP48730 415 aa10.32□□□□□ -0.76
USP39-210ENST00000459775 TPD52P55327 224 aaPredicted RBP10.32□□□□□ -0.76
USP39-210ENST00000459775 TUBA1BP68363 451 aa10.32□□□□□ -0.76
USP39-210ENST00000459775 CCINQ13939 588 aa10.32□□□□□ -0.76
USP39-210ENST00000459775 MLF2Q15773 248 aaPredicted RBP10.32□□□□□ -0.76
USP39-210ENST00000459775 SKIDA1Q1XH10 827 aa10.32□□□□□ -0.76
USP39-210ENST00000459775 TUBA1AQ71U36 451 aa10.32□□□□□ -0.76
USP39-210ENST00000459775 IQCKQ8N0W5 287 aa10.32□□□□□ -0.76
USP39-210ENST00000459775 SIX5Q8N196 739 aa10.32□□□□□ -0.76
USP39-210ENST00000459775 MREGQ8N565 214 aa10.32□□□□□ -0.76
USP39-210ENST00000459775 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.32□□□□□ -0.76
USP39-210ENST00000459775 EPS8L3Q8TE67 593 aaKnown RBP10.32□□□□□ -0.76
USP39-210ENST00000459775 SLC35B4Q969S0 331 aa10.32□□□□□ -0.76
USP39-210ENST00000459775 ARRDC3Q96B67 414 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms