RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 SOX9P48436 509 aa24.35■■□□□ 1.49
U2AF1-204ENST00000459639 N4BP2L1Q5TBK1 243 aaPredicted RBP24.35■■□□□ 1.49
U2AF1-204ENST00000459639 HECTD2Q5U5R9 776 aa24.35■■□□□ 1.49
U2AF1-204ENST00000459639 PSAPL1Q6NUJ1 521 aa24.35■■□□□ 1.49
U2AF1-204ENST00000459639 PNPLA1Q8N8W4 532 aa24.35■■□□□ 1.49
U2AF1-204ENST00000459639 LPGAT1Q92604 370 aa24.35■■□□□ 1.49
U2AF1-204ENST00000459639 TBRG4Q969Z0 631 aaKnown RBP eCLIP24.35■■□□□ 1.49
U2AF1-204ENST00000459639 LRCH3Q96II8 777 aa24.35■■□□□ 1.49
U2AF1-204ENST00000459639 NDNQ99608 321 aa24.35■■□□□ 1.49
U2AF1-204ENST00000459639 P2RY13Q9BPV8 354 aa24.35■■□□□ 1.49
U2AF1-204ENST00000459639 TRPV5Q9NQA5 729 aa24.35■■□□□ 1.49
U2AF1-204ENST00000459639 SUN2Q9UH99 717 aa24.35■■□□□ 1.49
U2AF1-204ENST00000459639 HCN2Q9UL51 889 aa24.35■■□□□ 1.49
U2AF1-204ENST00000459639 A0A087X1B8 175 aa24.34■■□□□ 1.49
U2AF1-204ENST00000459639 PHGDHO43175 533 aaKnown RBP24.34■■□□□ 1.49
U2AF1-204ENST00000459639 NDUFS3O75489 264 aa24.34■■□□□ 1.49
U2AF1-204ENST00000459639 SRP72O76094 671 aaKnown RBP24.34■■□□□ 1.49
U2AF1-204ENST00000459639 FAM107AO95990 144 aa24.34■■□□□ 1.49
U2AF1-204ENST00000459639 HNRNPLP14866 589 aaKnown RBP eCLIP24.34■■□□□ 1.49
U2AF1-204ENST00000459639 TIMP2P16035 220 aa24.34■■□□□ 1.49
U2AF1-204ENST00000459639 BPIP17213 487 aa24.34■■□□□ 1.49
U2AF1-204ENST00000459639 SERPINB4P48594 390 aa24.34■■□□□ 1.49
U2AF1-204ENST00000459639 ZDHHC20Q5W0Z9 365 aa24.34■■□□□ 1.49
U2AF1-204ENST00000459639 EGFLAMQ63HQ2 1017 aa24.34■■□□□ 1.49
U2AF1-204ENST00000459639 CCDC91Q7Z6B0 441 aa24.34■■□□□ 1.49
U2AF1-204ENST00000459639 CEP97Q8IW35 865 aa24.34■■□□□ 1.49
U2AF1-204ENST00000459639 ARMC2Q8NEN0 867 aa24.34■■□□□ 1.49
U2AF1-204ENST00000459639 BCAS4Q8TDM0 211 aa24.34■■□□□ 1.49
U2AF1-204ENST00000459639 PBXIP1Q96AQ6 731 aa24.34■■□□□ 1.49
U2AF1-204ENST00000459639 EMCNQ9ULC0 261 aa24.34■■□□□ 1.49
U2AF1-204ENST00000459639 FNDC3AQ9Y2H6 1198 aaKnown RBP24.34■■□□□ 1.49
U2AF1-204ENST00000459639 CRYL1Q9Y2S2 319 aa24.34■■□□□ 1.49
U2AF1-204ENST00000459639 ACOT9Q9Y305 439 aa24.34■■□□□ 1.49
U2AF1-204ENST00000459639 VWA7Q9Y334 891 aa24.34■■□□□ 1.49
U2AF1-204ENST00000459639 BPTFQ12830 3046 aa24.34■■□□□ 1.49
U2AF1-204ENST00000459639 C16orf96A6NNT2 1141 aa24.34■■□□□ 1.49
U2AF1-204ENST00000459639 A8MX80 341 aa24.34■■□□□ 1.49
U2AF1-204ENST00000459639 GAPDHSO14556 408 aaPredicted RBP24.34■■□□□ 1.49
U2AF1-204ENST00000459639 NPC1O15118 1278 aa24.34■■□□□ 1.49
U2AF1-204ENST00000459639 PRAMEF1O95521 474 aa24.34■■□□□ 1.49
U2AF1-204ENST00000459639 XPAP23025 273 aaPredicted RBP24.34■■□□□ 1.49
U2AF1-204ENST00000459639 TNFRSF4P43489 277 aa24.34■■□□□ 1.49
U2AF1-204ENST00000459639 IRF9Q00978 393 aa24.34■■□□□ 1.49
U2AF1-204ENST00000459639 PTSQ03393 145 aa24.34■■□□□ 1.49
U2AF1-204ENST00000459639 CCDC153Q494R4 210 aa24.34■■□□□ 1.49
U2AF1-204ENST00000459639 CERS6Q6ZMG9 384 aa24.34■■□□□ 1.49
U2AF1-204ENST00000459639 PIANPQ8IYJ0 282 aa24.34■■□□□ 1.49
U2AF1-204ENST00000459639 TSNARE1Q96NA8 513 aa24.34■■□□□ 1.49
U2AF1-204ENST00000459639 CCT8L2Q96SF2 557 aa24.34■■□□□ 1.49
U2AF1-204ENST00000459639 OLFM1Q99784 485 aa24.34■■□□□ 1.49
U2AF1-204ENST00000459639 PCDH12Q9NPG4 1184 aa24.34■■□□□ 1.49
U2AF1-204ENST00000459639 PPM1HQ9ULR3 514 aa24.34■■□□□ 1.49
U2AF1-204ENST00000459639 CKAP5Q14008 2032 aa24.33■■□□□ 1.49
U2AF1-204ENST00000459639 GLYATL1P3A0A0U1RQE8 302 aa24.33■■□□□ 1.49
U2AF1-204ENST00000459639 TCP11X1B4DZS4 312 aa24.33■■□□□ 1.49
U2AF1-204ENST00000459639 PLIN3O60664 434 aa24.33■■□□□ 1.49
U2AF1-204ENST00000459639 C1SP09871 688 aa24.33■■□□□ 1.49
U2AF1-204ENST00000459639 CHRM1P11229 460 aaPredicted RBP24.33■■□□□ 1.49
U2AF1-204ENST00000459639 TAC1P20366 129 aa24.33■■□□□ 1.49
U2AF1-204ENST00000459639 ITGALP20701 1170 aa24.33■■□□□ 1.49
U2AF1-204ENST00000459639 ITGB7P26010 798 aa24.33■■□□□ 1.49
U2AF1-204ENST00000459639 CDKN1CP49918 316 aaPredicted RBP24.33■■□□□ 1.49
U2AF1-204ENST00000459639 GALK1P51570 392 aa24.33■■□□□ 1.49
U2AF1-204ENST00000459639 ENPP2Q13822 863 aa24.33■■□□□ 1.49
U2AF1-204ENST00000459639 ARHGEF7Q14155 803 aa24.33■■□□□ 1.49
U2AF1-204ENST00000459639 DBN1Q16643 649 aa24.33■■□□□ 1.49
U2AF1-204ENST00000459639 LRRC73Q5JTD7 316 aa24.33■■□□□ 1.49
U2AF1-204ENST00000459639 ZNF549Q6P9A3 640 aa24.33■■□□□ 1.49
U2AF1-204ENST00000459639 FAM151BQ6UXP7 276 aa24.33■■□□□ 1.49
U2AF1-204ENST00000459639 DPPA4Q7L190 304 aa24.33■■□□□ 1.49
U2AF1-204ENST00000459639 PARS2Q7L3T8 475 aaKnown RBP24.33■■□□□ 1.49
U2AF1-204ENST00000459639 SNX20Q7Z614 316 aa24.33■■□□□ 1.49
U2AF1-204ENST00000459639 DSG4Q86SJ6 1040 aa24.33■■□□□ 1.49
U2AF1-204ENST00000459639 PLD6Q8N2A8 252 aaKnown RBP24.33■■□□□ 1.49
U2AF1-204ENST00000459639 LRRC8CQ8TDW0 803 aa24.33■■□□□ 1.49
U2AF1-204ENST00000459639 AARSD1Q9BTE6 412 aaKnown RBP24.33■■□□□ 1.49
U2AF1-204ENST00000459639 C1QTNF1Q9BXJ1 281 aa24.33■■□□□ 1.49
U2AF1-204ENST00000459639 IL26Q9NPH9 171 aa24.33■■□□□ 1.49
U2AF1-204ENST00000459639 TMEM216Q9P0N5 145 aa24.33■■□□□ 1.49
U2AF1-204ENST00000459639 KPNA3O00505 521 aaPredicted RBP24.32■■□□□ 1.48
U2AF1-204ENST00000459639 PROCP04070 461 aa24.32■■□□□ 1.48
U2AF1-204ENST00000459639 VIMP08670 466 aaKnown RBP24.32■■□□□ 1.48
U2AF1-204ENST00000459639 FDXRP22570 491 aa24.32■■□□□ 1.48
U2AF1-204ENST00000459639 SEMG2Q02383 582 aa24.32■■□□□ 1.48
U2AF1-204ENST00000459639 LRRC34Q8IZ02 419 aa24.32■■□□□ 1.48
U2AF1-204ENST00000459639 PLCD3Q8N3E9 789 aa24.32■■□□□ 1.48
U2AF1-204ENST00000459639 PIP4K2CQ8TBX8 421 aa24.32■■□□□ 1.48
U2AF1-204ENST00000459639 PPP1R16AQ96I34 528 aa24.32■■□□□ 1.48
U2AF1-204ENST00000459639 PLEKHG4BQ96PX9 1271 aa24.32■■□□□ 1.48
U2AF1-204ENST00000459639 FAM129BQ96TA1 746 aa24.32■■□□□ 1.48
U2AF1-204ENST00000459639 FAM96AQ9H5X1 160 aa24.32■■□□□ 1.48
U2AF1-204ENST00000459639 FBRSL1Q9HCM7 1045 aaKnown RBP24.32■■□□□ 1.48
U2AF1-204ENST00000459639 SARDHQ9UL12 918 aa24.32■■□□□ 1.48
U2AF1-204ENST00000459639 PLXNA2O75051 1894 aa24.32■■□□□ 1.48
U2AF1-204ENST00000459639 UBA6A0AVT1 1052 aaPredicted RBP24.31■■□□□ 1.48
U2AF1-204ENST00000459639 BIRC5O15392 142 aa24.31■■□□□ 1.48
U2AF1-204ENST00000459639 EPHX1P07099 455 aa24.31■■□□□ 1.48
U2AF1-204ENST00000459639 DRD4P21917 467 aa24.31■■□□□ 1.48
U2AF1-204ENST00000459639 CTHP32929 405 aa24.31■■□□□ 1.48
U2AF1-204ENST00000459639 GMPRP36959 345 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms