RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 FAM83DQ9H4H8 585 aa11.22□□□□□ -0.61
TRAF4-206ENST00000454852 ACSS3Q9H6R3 686 aa11.22□□□□□ -0.61
TRAF4-206ENST00000454852 IL26Q9NPH9 171 aa11.22□□□□□ -0.61
TRAF4-206ENST00000454852 ARGLU1Q9NWB6 273 aaPredicted RBP11.22□□□□□ -0.61
TRAF4-206ENST00000454852 SMOXQ9NWM0 555 aa11.22□□□□□ -0.61
TRAF4-206ENST00000454852 FETUBQ9UGM5 382 aa11.22□□□□□ -0.61
TRAF4-206ENST00000454852 SLC2A6Q9UGQ3 507 aa11.22□□□□□ -0.61
TRAF4-206ENST00000454852 CYP8B1Q9UNU6 501 aa11.22□□□□□ -0.61
TRAF4-206ENST00000454852 ZFR2Q9UPR6 939 aaKnown RBP11.22□□□□□ -0.61
TRAF4-206ENST00000454852 EML5Q05BV3 1969 aa11.21□□□□□ -0.61
TRAF4-206ENST00000454852 TBC1D3DA0A087WVF3 549 aa11.21□□□□□ -0.61
TRAF4-206ENST00000454852 TBC1D3IA0A087WXS9 549 aa11.21□□□□□ -0.61
TRAF4-206ENST00000454852 TBC1D3EA0A087X179 549 aa11.21□□□□□ -0.61
TRAF4-206ENST00000454852 TBC1D3KA0A087X1G2 549 aa11.21□□□□□ -0.61
TRAF4-206ENST00000454852 GLYATL1P3A0A0U1RQE8 302 aa11.21□□□□□ -0.61
TRAF4-206ENST00000454852 A0A0U1RQS6 177 aa11.21□□□□□ -0.61
TRAF4-206ENST00000454852 A0A1W2PQU0 124 aa11.21□□□□□ -0.61
TRAF4-206ENST00000454852 CCDC162PA2VCL2 907 aa11.21□□□□□ -0.61
TRAF4-206ENST00000454852 TBC1D3FA6NER0 549 aaPredicted RBP11.21□□□□□ -0.61
TRAF4-206ENST00000454852 FAM159BA6NKW6 160 aa11.21□□□□□ -0.61
TRAF4-206ENST00000454852 A8MX80 341 aa11.21□□□□□ -0.61
TRAF4-206ENST00000454852 TBC1D3LB9A6J9 549 aa11.21□□□□□ -0.61
TRAF4-206ENST00000454852 LZTS3O60299 673 aaPredicted RBP11.21□□□□□ -0.61
TRAF4-206ENST00000454852 PCDH8O95206 1070 aa11.21□□□□□ -0.61
TRAF4-206ENST00000454852 NUDT17P0C025 328 aa11.21□□□□□ -0.61
TRAF4-206ENST00000454852 TBC1D3HP0C7X1 549 aa11.21□□□□□ -0.61
TRAF4-206ENST00000454852 SSTR1P30872 391 aa11.21□□□□□ -0.61
TRAF4-206ENST00000454852 FOXN2P32314 431 aa11.21□□□□□ -0.61
TRAF4-206ENST00000454852 CNR2P34972 360 aa11.21□□□□□ -0.61
TRAF4-206ENST00000454852 ETV3P41162 512 aa11.21□□□□□ -0.61
TRAF4-206ENST00000454852 SEMG2Q02383 582 aa11.21□□□□□ -0.61
TRAF4-206ENST00000454852 ILF2Q12905 390 aaKnown RBP11.21□□□□□ -0.61
TRAF4-206ENST00000454852 NAB1Q13506 487 aa11.21□□□□□ -0.61
TRAF4-206ENST00000454852 FGL2Q14314 439 aa11.21□□□□□ -0.61
TRAF4-206ENST00000454852 PTPRCAPQ14761 206 aa11.21□□□□□ -0.61
TRAF4-206ENST00000454852 ACOX1Q15067 660 aa11.21□□□□□ -0.61
TRAF4-206ENST00000454852 UAP1Q16222 522 aaPredicted RBP11.21□□□□□ -0.61
TRAF4-206ENST00000454852 ZNF284Q2VY69 593 aa11.21□□□□□ -0.61
TRAF4-206ENST00000454852 HP1BP3Q5SSJ5 553 aaPredicted RBP11.21□□□□□ -0.61
TRAF4-206ENST00000454852 KIAA0895LQ68EN5 471 aa11.21□□□□□ -0.61
TRAF4-206ENST00000454852 TBC1D3GQ6DHY5 549 aa11.21□□□□□ -0.61
TRAF4-206ENST00000454852 TBC1D3CQ6IPX1 549 aa11.21□□□□□ -0.61
TRAF4-206ENST00000454852 AFTPHQ6ULP2 937 aa11.21□□□□□ -0.61
TRAF4-206ENST00000454852 TBC1D3Q8IZP1 549 aaPredicted RBP11.21□□□□□ -0.61
TRAF4-206ENST00000454852 CNPY4Q8N129 248 aa11.21□□□□□ -0.61
TRAF4-206ENST00000454852 HDAC10Q969S8 669 aa11.21□□□□□ -0.61
TRAF4-206ENST00000454852 CENPTQ96BT3 561 aa11.21□□□□□ -0.61
TRAF4-206ENST00000454852 SPACA7Q96KW9 195 aa11.21□□□□□ -0.61
TRAF4-206ENST00000454852 VPS35Q96QK1 796 aa11.21□□□□□ -0.61
TRAF4-206ENST00000454852 KLF6Q99612 283 aaPredicted RBP11.21□□□□□ -0.61
TRAF4-206ENST00000454852 TRIM56Q9BRZ2 755 aaKnown RBP11.21□□□□□ -0.61
TRAF4-206ENST00000454852 ZSCAN5AQ9BUG6 496 aa11.21□□□□□ -0.61
TRAF4-206ENST00000454852 C1QTNF7Q9BXJ2 289 aa11.21□□□□□ -0.61
TRAF4-206ENST00000454852 SLC17A9Q9BYT1 436 aa11.21□□□□□ -0.61
TRAF4-206ENST00000454852 TPSD1Q9BZJ3 242 aa11.21□□□□□ -0.61
TRAF4-206ENST00000454852 ABCG8Q9H221 673 aa11.21□□□□□ -0.61
TRAF4-206ENST00000454852 FKBPLQ9UIM3 349 aa11.21□□□□□ -0.61
TRAF4-206ENST00000454852 DMTF1Q9Y222 760 aa11.21□□□□□ -0.61
TRAF4-206ENST00000454852 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.21□□□□□ -0.61
TRAF4-206ENST00000454852 CACNA1IQ9P0X4 2223 aa11.21□□□□□ -0.62
TRAF4-206ENST00000454852 ZDBF2Q9HCK1 2354 aa11.2□□□□□ -0.62
TRAF4-206ENST00000454852 A0A087WUV0 522 aaPredicted RBP11.2□□□□□ -0.62
TRAF4-206ENST00000454852 IGLON5A6NGN9 336 aa11.2□□□□□ -0.62
TRAF4-206ENST00000454852 TOR1BO14657 336 aa11.2□□□□□ -0.62
TRAF4-206ENST00000454852 BUD23O43709 281 aaKnown RBP11.2□□□□□ -0.62
TRAF4-206ENST00000454852 TCEA3O75764 348 aa11.2□□□□□ -0.62
TRAF4-206ENST00000454852 SRP72O76094 671 aaKnown RBP11.2□□□□□ -0.62
TRAF4-206ENST00000454852 VAPBO95292 243 aa11.2□□□□□ -0.62
TRAF4-206ENST00000454852 PRAMEF1O95521 474 aa11.2□□□□□ -0.62
TRAF4-206ENST00000454852 GOT2P00505 430 aaKnown RBP11.2□□□□□ -0.62
TRAF4-206ENST00000454852 IGHV4-34P06331 123 aa11.2□□□□□ -0.62
TRAF4-206ENST00000454852 OGNP20774 298 aaKnown RBP11.2□□□□□ -0.62
TRAF4-206ENST00000454852 MC4RP32245 332 aa11.2□□□□□ -0.62
TRAF4-206ENST00000454852 HSD17B3P37058 310 aa11.2□□□□□ -0.62
TRAF4-206ENST00000454852 PPP2CBP62714 309 aa11.2□□□□□ -0.62
TRAF4-206ENST00000454852 PPP2CAP67775 309 aa11.2□□□□□ -0.62
TRAF4-206ENST00000454852 PRAMEP78395 509 aa11.2□□□□□ -0.62
TRAF4-206ENST00000454852 CACNG1Q06432 222 aa11.2□□□□□ -0.62
TRAF4-206ENST00000454852 DMWDQ09019 674 aa11.2□□□□□ -0.62
TRAF4-206ENST00000454852 MGAT5Q09328 741 aa11.2□□□□□ -0.62
TRAF4-206ENST00000454852 ITGA9Q13797 1035 aa11.2□□□□□ -0.62
TRAF4-206ENST00000454852 TYSND1Q2T9J0 566 aa11.2□□□□□ -0.62
TRAF4-206ENST00000454852 SETMARQ53H47 684 aaPredicted RBP11.2□□□□□ -0.62
TRAF4-206ENST00000454852 SEL1L3Q68CR1 1132 aa11.2□□□□□ -0.62
TRAF4-206ENST00000454852 NEPROQ6NW34 567 aa11.2□□□□□ -0.62
TRAF4-206ENST00000454852 TRMT10BQ6PF06 316 aaKnown RBP11.2□□□□□ -0.62
TRAF4-206ENST00000454852 CES3Q6UWW8 571 aa11.2□□□□□ -0.62
TRAF4-206ENST00000454852 CERS6Q6ZMG9 384 aa11.2□□□□□ -0.62
TRAF4-206ENST00000454852 RFLNAQ6ZTI6 216 aa11.2□□□□□ -0.62
TRAF4-206ENST00000454852 KIAA0408Q6ZU52 694 aa11.2□□□□□ -0.62
TRAF4-206ENST00000454852 SNX20Q7Z614 316 aa11.2□□□□□ -0.62
TRAF4-206ENST00000454852 FAM124AQ86V42 546 aa11.2□□□□□ -0.62
TRAF4-206ENST00000454852 KCNMB4Q86W47 210 aa11.2□□□□□ -0.62
TRAF4-206ENST00000454852 SLC26A11Q86WA9 606 aa11.2□□□□□ -0.62
TRAF4-206ENST00000454852 TP53I13Q8NBR0 393 aaPredicted RBP11.2□□□□□ -0.62
TRAF4-206ENST00000454852 OR4L1Q8NH43 312 aa11.2□□□□□ -0.62
TRAF4-206ENST00000454852 GABPB2Q8TAK5 448 aaPredicted RBP11.2□□□□□ -0.62
TRAF4-206ENST00000454852 CALML6Q8TD86 181 aa11.2□□□□□ -0.62
TRAF4-206ENST00000454852 ANKRD7Q92527 254 aa11.2□□□□□ -0.62
TRAF4-206ENST00000454852 AP2M1Q96CW1 435 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms