RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 BIRC2Q13490 618 aa12.85□□□□□ -0.35
CHD3-206ENST00000452447 PEX6Q13608 980 aa12.85□□□□□ -0.35
CHD3-206ENST00000452447 SOWAHCQ53LP3 525 aaPredicted RBP12.85□□□□□ -0.35
CHD3-206ENST00000452447 DOK6Q6PKX4 331 aa12.85□□□□□ -0.35
CHD3-206ENST00000452447 NLRP8Q86W28 1048 aa12.85□□□□□ -0.35
CHD3-206ENST00000452447 VSIG1Q86XK7 387 aa12.85□□□□□ -0.35
CHD3-206ENST00000452447 LPCAT1Q8NF37 534 aa12.85□□□□□ -0.35
CHD3-206ENST00000452447 ARRDC2Q8TBH0 407 aa12.85□□□□□ -0.35
CHD3-206ENST00000452447 GPBAR1Q8TDU6 330 aa12.85□□□□□ -0.35
CHD3-206ENST00000452447 SCAMP4Q969E2 229 aa12.85□□□□□ -0.35
CHD3-206ENST00000452447 LIN37Q96GY3 246 aaPredicted RBP12.85□□□□□ -0.35
CHD3-206ENST00000452447 TMEM74Q96NL1 305 aa12.85□□□□□ -0.35
CHD3-206ENST00000452447 SMIM14Q96QK8 99 aa12.85□□□□□ -0.35
CHD3-206ENST00000452447 FRMD8Q9BZ67 464 aaPredicted RBP12.85□□□□□ -0.35
CHD3-206ENST00000452447 FOXP3Q9BZS1 431 aa12.85□□□□□ -0.35
CHD3-206ENST00000452447 ABCG8Q9H221 673 aa12.85□□□□□ -0.35
CHD3-206ENST00000452447 PRORYQ9H606 182 aa12.85□□□□□ -0.35
CHD3-206ENST00000452447 EPB41L5Q9HCM4 733 aa12.85□□□□□ -0.35
CHD3-206ENST00000452447 RPL26L1Q9UNX3 145 aaKnown RBP12.85□□□□□ -0.35
CHD3-206ENST00000452447 SLC17A4Q9Y2C5 497 aa12.85□□□□□ -0.35
CHD3-206ENST00000452447 A0A1W2PNU3 283 aaPredicted RBP12.84□□□□□ -0.35
CHD3-206ENST00000452447 ZNF487B1APH4 448 aa12.84□□□□□ -0.35
CHD3-206ENST00000452447 KLK10O43240 276 aa12.84□□□□□ -0.35
CHD3-206ENST00000452447 ZW10O43264 779 aa12.84□□□□□ -0.35
CHD3-206ENST00000452447 MTA2O94776 668 aa12.84□□□□□ -0.35
CHD3-206ENST00000452447 TNFSF15O95150 251 aa12.84□□□□□ -0.35
CHD3-206ENST00000452447 FUCA1P04066 466 aa12.84□□□□□ -0.35
CHD3-206ENST00000452447 KRT1P04264 644 aa12.84□□□□□ -0.35
CHD3-206ENST00000452447 TNNT1P13805 278 aa12.84□□□□□ -0.35
CHD3-206ENST00000452447 ZFXP17010 805 aaPredicted RBP12.84□□□□□ -0.35
CHD3-206ENST00000452447 CD86P42081 329 aa12.84□□□□□ -0.35
CHD3-206ENST00000452447 MLLT3P42568 568 aaPredicted RBP12.84□□□□□ -0.35
CHD3-206ENST00000452447 SLC1A1P43005 524 aa12.84□□□□□ -0.35
CHD3-206ENST00000452447 POLD2P49005 469 aa12.84□□□□□ -0.35
CHD3-206ENST00000452447 INHBCP55103 352 aa12.84□□□□□ -0.35
CHD3-206ENST00000452447 CXADRP78310 365 aa12.84□□□□□ -0.35
CHD3-206ENST00000452447 NIPAL4Q0D2K0 466 aa12.84□□□□□ -0.35
CHD3-206ENST00000452447 EIF3IQ13347 325 aaKnown RBP12.84□□□□□ -0.35
CHD3-206ENST00000452447 HLTFQ14527 1009 aaKnown RBP eCLIP12.84□□□□□ -0.35
CHD3-206ENST00000452447 PDK1Q15118 436 aa12.84□□□□□ -0.35
CHD3-206ENST00000452447 SLC30A9Q6PML9 568 aa12.84□□□□□ -0.35
CHD3-206ENST00000452447 ADAMTSL4Q6UY14 1074 aa12.84□□□□□ -0.35
CHD3-206ENST00000452447 RFLNAQ6ZTI6 216 aa12.84□□□□□ -0.35
CHD3-206ENST00000452447 ZNF765Q7L2R6 523 aa12.84□□□□□ -0.35
CHD3-206ENST00000452447 GPR155Q7Z3F1 870 aa12.84□□□□□ -0.35
CHD3-206ENST00000452447 B3GNT8Q7Z7M8 397 aa12.84□□□□□ -0.35
CHD3-206ENST00000452447 SFTPA2Q8IWL1 248 aa12.84□□□□□ -0.35
CHD3-206ENST00000452447 NRSN1Q8IZ57 195 aa12.84□□□□□ -0.35
CHD3-206ENST00000452447 PLD5Q8N7P1 536 aa12.84□□□□□ -0.35
CHD3-206ENST00000452447 EXD1Q8NHP7 514 aa12.84□□□□□ -0.35
CHD3-206ENST00000452447 CCHCR1Q8TD31 782 aa12.84□□□□□ -0.35
CHD3-206ENST00000452447 ZDHHC1Q8WTX9 485 aa12.84□□□□□ -0.35
CHD3-206ENST00000452447 CCDC97Q96F63 343 aaPredicted RBP12.84□□□□□ -0.35
CHD3-206ENST00000452447 DPH1Q9BZG8 443 aa12.84□□□□□ -0.35
CHD3-206ENST00000452447 CDH19Q9H159 772 aa12.84□□□□□ -0.35
CHD3-206ENST00000452447 SPATS2LQ9NUQ6 558 aaKnown RBP12.84□□□□□ -0.35
CHD3-206ENST00000452447 TAAR2Q9P1P5 351 aa12.84□□□□□ -0.35
CHD3-206ENST00000452447 RNF215Q9Y6U7 377 aa12.84□□□□□ -0.35
CHD3-206ENST00000452447 C1orf232A0A0U1RR37 186 aa12.83□□□□□ -0.36
CHD3-206ENST00000452447 RHPN2P1A8MT19 583 aa12.83□□□□□ -0.36
CHD3-206ENST00000452447 ANKRD66B4E2M5 251 aa12.83□□□□□ -0.36
CHD3-206ENST00000452447 PLD2O14939 933 aa12.83□□□□□ -0.36
CHD3-206ENST00000452447 PPP1R12AO14974 1030 aaPredicted RBP12.83□□□□□ -0.36
CHD3-206ENST00000452447 CLDN7O95471 211 aa12.83□□□□□ -0.36
CHD3-206ENST00000452447 PRLP01236 227 aa12.83□□□□□ -0.36
CHD3-206ENST00000452447 IVLP07476 585 aa12.83□□□□□ -0.36
CHD3-206ENST00000452447 ITGA2BP08514 1039 aa12.83□□□□□ -0.36
CHD3-206ENST00000452447 AK4P27144 223 aaPredicted RBP12.83□□□□□ -0.36
CHD3-206ENST00000452447 STC1P52823 247 aa12.83□□□□□ -0.36
CHD3-206ENST00000452447 UCNP55089 124 aa12.83□□□□□ -0.36
CHD3-206ENST00000452447 IFI35P80217 286 aaPredicted RBP12.83□□□□□ -0.36
CHD3-206ENST00000452447 CTBSQ01459 385 aa12.83□□□□□ -0.36
CHD3-206ENST00000452447 IHHQ14623 411 aa12.83□□□□□ -0.36
CHD3-206ENST00000452447 LRRC38Q5VT99 294 aa12.83□□□□□ -0.36
CHD3-206ENST00000452447 SLC9A4Q6AI14 798 aa12.83□□□□□ -0.36
CHD3-206ENST00000452447 RAB11FIP2Q7L804 512 aa12.83□□□□□ -0.36
CHD3-206ENST00000452447 SPRED1Q7Z699 444 aa12.83□□□□□ -0.36
CHD3-206ENST00000452447 NRROSQ86YC3 692 aa12.83□□□□□ -0.36
CHD3-206ENST00000452447 RFX6Q8HWS3 928 aa12.83□□□□□ -0.36
CHD3-206ENST00000452447 RHOT1Q8IXI2 618 aa12.83□□□□□ -0.36
CHD3-206ENST00000452447 RAVER1Q8IY67 606 aaKnown RBP12.83□□□□□ -0.36
CHD3-206ENST00000452447 FBXO39Q8N4B4 442 aa12.83□□□□□ -0.36
CHD3-206ENST00000452447 RNF25Q96BH1 459 aaPredicted RBP12.83□□□□□ -0.36
CHD3-206ENST00000452447 PRR11Q96HE9 360 aaPredicted RBP12.83□□□□□ -0.36
CHD3-206ENST00000452447 UBL7Q96S82 380 aaPredicted RBP12.83□□□□□ -0.36
CHD3-206ENST00000452447 LYSMD1Q96S90 227 aa12.83□□□□□ -0.36
CHD3-206ENST00000452447 MLPHQ9BV36 600 aaPredicted RBP12.83□□□□□ -0.36
CHD3-206ENST00000452447 ADGRE3Q9BY15 652 aa12.83□□□□□ -0.36
CHD3-206ENST00000452447 DDX56Q9NY93 547 aaKnown RBP12.83□□□□□ -0.36
CHD3-206ENST00000452447 SEPT10Q9P0V9 454 aa12.83□□□□□ -0.36
CHD3-206ENST00000452447 INTUQ9ULD6 942 aa12.83□□□□□ -0.36
CHD3-206ENST00000452447 TMEM98Q9Y2Y6 226 aa12.83□□□□□ -0.36
CHD3-206ENST00000452447 ATMQ13315 3056 aa12.83□□□□□ -0.36
CHD3-206ENST00000452447 PMS2P1A4D2B8 440 aa12.82□□□□□ -0.36
CHD3-206ENST00000452447 SPOPO43791 374 aa12.82□□□□□ -0.36
CHD3-206ENST00000452447 ASMTLO95671 621 aa12.82□□□□□ -0.36
CHD3-206ENST00000452447 SOD1P00441 154 aa12.82□□□□□ -0.36
CHD3-206ENST00000452447 FGF1P05230 155 aa12.82□□□□□ -0.36
CHD3-206ENST00000452447 ALDH4A1P30038 563 aa12.82□□□□□ -0.36
CHD3-206ENST00000452447 CCKBRP32239 447 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms