RNA–Protein interactions for RNA: ENST00000449971.5

FAM3A-216, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-216ENST00000449971 KLQ9UEF7 1012 aa17.52■□□□□ 0.4
FAM3A-216ENST00000449971 CHKBQ9Y259 395 aa17.52■□□□□ 0.4
FAM3A-216ENST00000449971 PTPN13Q12923 2485 aa17.52■□□□□ 0.39
FAM3A-216ENST00000449971 CCDC187A0A096LP49 1063 aa17.51■□□□□ 0.39
FAM3A-216ENST00000449971 A0A0A6YYK5 440 aaPredicted RBP17.51■□□□□ 0.39
FAM3A-216ENST00000449971 A0A0U1RQS6 177 aa17.51■□□□□ 0.39
FAM3A-216ENST00000449971 TPP1O14773 563 aa17.51■□□□□ 0.39
FAM3A-216ENST00000449971 EFSO43281 561 aa17.51■□□□□ 0.39
FAM3A-216ENST00000449971 PSTPIP1O43586 416 aa17.51■□□□□ 0.39
FAM3A-216ENST00000449971 FZD6O60353 706 aa17.51■□□□□ 0.39
FAM3A-216ENST00000449971 TSHRP16473 764 aa17.51■□□□□ 0.39
FAM3A-216ENST00000449971 CA4P22748 312 aa17.51■□□□□ 0.39
FAM3A-216ENST00000449971 LHCGRP22888 699 aa17.51■□□□□ 0.39
FAM3A-216ENST00000449971 ETV3P41162 512 aa17.51■□□□□ 0.39
FAM3A-216ENST00000449971 HK3P52790 923 aa17.51■□□□□ 0.39
FAM3A-216ENST00000449971 SPIDRQ14159 915 aa17.51■□□□□ 0.39
FAM3A-216ENST00000449971 IHHQ14623 411 aa17.51■□□□□ 0.39
FAM3A-216ENST00000449971 LLGL1Q15334 1064 aa17.51■□□□□ 0.39
FAM3A-216ENST00000449971 TGIF1Q15583 401 aa17.51■□□□□ 0.39
FAM3A-216ENST00000449971 KAZNQ674X7 775 aa17.51■□□□□ 0.39
FAM3A-216ENST00000449971 ALG1LQ6GMV1 187 aa17.51■□□□□ 0.39
FAM3A-216ENST00000449971 NYAP1Q6ZVC0 841 aa17.51■□□□□ 0.39
FAM3A-216ENST00000449971 B4GALNT4Q76KP1 1039 aa17.51■□□□□ 0.39
FAM3A-216ENST00000449971 TSPAN33Q86UF1 283 aa17.51■□□□□ 0.39
FAM3A-216ENST00000449971 SLC35F3Q8IY50 421 aa17.51■□□□□ 0.39
FAM3A-216ENST00000449971 FUBP1Q96AE4 644 aaKnown RBP17.51■□□□□ 0.39
FAM3A-216ENST00000449971 TBATAQ96M53 351 aa17.51■□□□□ 0.39
FAM3A-216ENST00000449971 SMIM14Q96QK8 99 aa17.51■□□□□ 0.39
FAM3A-216ENST00000449971 MCCC1Q96RQ3 725 aaPredicted RBP17.51■□□□□ 0.39
FAM3A-216ENST00000449971 CCDC3Q9BQI4 270 aa17.51■□□□□ 0.39
FAM3A-216ENST00000449971 CLPBQ9H078 707 aa17.51■□□□□ 0.39
FAM3A-216ENST00000449971 SEPT10Q9P0V9 454 aa17.51■□□□□ 0.39
FAM3A-216ENST00000449971 SALL4Q9UJQ4 1053 aa17.51■□□□□ 0.39
FAM3A-216ENST00000449971 DOLKQ9UPQ8 538 aa17.51■□□□□ 0.39
FAM3A-216ENST00000449971 SSUH2Q9Y2M2 353 aa17.51■□□□□ 0.39
FAM3A-216ENST00000449971 PPIL1Q9Y3C6 166 aa17.51■□□□□ 0.39
FAM3A-216ENST00000449971 AHCTF1Q8WYP5 2266 aa17.51■□□□□ 0.39
FAM3A-216ENST00000449971 BSNQ9UPA5 3926 aa17.51■□□□□ 0.39
FAM3A-216ENST00000449971 DOPEY2Q9Y3R5 2298 aa17.5■□□□□ 0.39
FAM3A-216ENST00000449971 GOLGA6CA6NDK9 693 aa17.5■□□□□ 0.39
FAM3A-216ENST00000449971 GOLGA6BA6NDN3 693 aa17.5■□□□□ 0.39
FAM3A-216ENST00000449971 LMO7DNF2Z398 122 aa17.5■□□□□ 0.39
FAM3A-216ENST00000449971 PPP1R12AO14974 1030 aaPredicted RBP17.5■□□□□ 0.39
FAM3A-216ENST00000449971 YY2O15391 372 aa17.5■□□□□ 0.39
FAM3A-216ENST00000449971 TNFP01375 233 aa17.5■□□□□ 0.39
FAM3A-216ENST00000449971 FAM87AP0C7U9 286 aa17.5■□□□□ 0.39
FAM3A-216ENST00000449971 GOLGA6DP0CG33 693 aa17.5■□□□□ 0.39
FAM3A-216ENST00000449971 KELP23276 732 aa17.5■□□□□ 0.39
FAM3A-216ENST00000449971 TRIM23P36406 574 aa17.5■□□□□ 0.39
FAM3A-216ENST00000449971 CDKN2BP42772 138 aa17.5■□□□□ 0.39
FAM3A-216ENST00000449971 RPIAP49247 311 aa17.5■□□□□ 0.39
FAM3A-216ENST00000449971 NAP1L1P55209 391 aaKnown RBP17.5■□□□□ 0.39
FAM3A-216ENST00000449971 IFI35P80217 286 aaPredicted RBP17.5■□□□□ 0.39
FAM3A-216ENST00000449971 ZBTB17Q13105 803 aa17.5■□□□□ 0.39
FAM3A-216ENST00000449971 TFDP2Q14188 446 aa17.5■□□□□ 0.39
FAM3A-216ENST00000449971 ELOCQ15369 112 aa17.5■□□□□ 0.39
FAM3A-216ENST00000449971 LINC00303Q3SY05 128 aa17.5■□□□□ 0.39
FAM3A-216ENST00000449971 FAM182AQ5T1J6 154 aa17.5■□□□□ 0.39
FAM3A-216ENST00000449971 ESRP1Q6NXG1 681 aaKnown RBP17.5■□□□□ 0.39
FAM3A-216ENST00000449971 SPOCD1Q6ZMY3 1216 aa17.5■□□□□ 0.39
FAM3A-216ENST00000449971 Q6ZVL8 140 aa17.5■□□□□ 0.39
FAM3A-216ENST00000449971 DAAM2Q86T65 1068 aa17.5■□□□□ 0.39
FAM3A-216ENST00000449971 PELI3Q8N2H9 469 aa17.5■□□□□ 0.39
FAM3A-216ENST00000449971 CBARPQ8N350 705 aaPredicted RBP17.5■□□□□ 0.39
FAM3A-216ENST00000449971 FSTL5Q8N475 847 aaPredicted RBP17.5■□□□□ 0.39
FAM3A-216ENST00000449971 CNTD1Q8N815 330 aa17.5■□□□□ 0.39
FAM3A-216ENST00000449971 GLMNQ92990 594 aa17.5■□□□□ 0.39
FAM3A-216ENST00000449971 GRAMD1AQ96CP6 724 aa17.5■□□□□ 0.39
FAM3A-216ENST00000449971 TDRD1Q9BXT4 1180 aaKnown RBP17.5■□□□□ 0.39
FAM3A-216ENST00000449971 CEP41Q9BYV8 373 aa17.5■□□□□ 0.39
FAM3A-216ENST00000449971 FOXP3Q9BZS1 431 aa17.5■□□□□ 0.39
FAM3A-216ENST00000449971 WDR26Q9H7D7 661 aa17.5■□□□□ 0.39
FAM3A-216ENST00000449971 PCDH9Q9HC56 1237 aa17.5■□□□□ 0.39
FAM3A-216ENST00000449971 KCTD5Q9NXV2 234 aa17.5■□□□□ 0.39
FAM3A-216ENST00000449971 GOLGA6AQ9NYA3 693 aa17.5■□□□□ 0.39
FAM3A-216ENST00000449971 SIRPGQ9P1W8 387 aa17.5■□□□□ 0.39
FAM3A-216ENST00000449971 GULP1Q9UBP9 304 aa17.5■□□□□ 0.39
FAM3A-216ENST00000449971 MOSPD1Q9UJG1 213 aa17.5■□□□□ 0.39
FAM3A-216ENST00000449971 RCCD1A6NED2 376 aa17.49■□□□□ 0.39
FAM3A-216ENST00000449971 TMEM202A6NGA9 273 aa17.49■□□□□ 0.39
FAM3A-216ENST00000449971 PSMD11O00231 422 aa17.49■□□□□ 0.39
FAM3A-216ENST00000449971 CST8O60676 142 aa17.49■□□□□ 0.39
FAM3A-216ENST00000449971 TCEA3O75764 348 aa17.49■□□□□ 0.39
FAM3A-216ENST00000449971 ZRANB2O95218 330 aaKnown RBP eCLIP17.49■□□□□ 0.39
FAM3A-216ENST00000449971 PRLP01236 227 aa17.49■□□□□ 0.39
FAM3A-216ENST00000449971 CELA2BP08218 269 aaPredicted RBP17.49■□□□□ 0.39
FAM3A-216ENST00000449971 ITGA2BP08514 1039 aa17.49■□□□□ 0.39
FAM3A-216ENST00000449971 HOXC4P09017 264 aaPredicted RBP17.49■□□□□ 0.39
FAM3A-216ENST00000449971 HGFP14210 728 aa17.49■□□□□ 0.39
FAM3A-216ENST00000449971 FECHP22830 423 aa17.49■□□□□ 0.39
FAM3A-216ENST00000449971 SLC5A2P31639 672 aa17.49■□□□□ 0.39
FAM3A-216ENST00000449971 CD86P42081 329 aa17.49■□□□□ 0.39
FAM3A-216ENST00000449971 KIAA1024LP59773 190 aa17.49■□□□□ 0.39
FAM3A-216ENST00000449971 COLEC12Q5KU26 742 aa17.49■□□□□ 0.39
FAM3A-216ENST00000449971 C11orf63Q6NUN7 778 aa17.49■□□□□ 0.39
FAM3A-216ENST00000449971 RAD9BQ6WBX8 426 aa17.49■□□□□ 0.39
FAM3A-216ENST00000449971 ATG14Q6ZNE5 492 aa17.49■□□□□ 0.39
FAM3A-216ENST00000449971 BZW1Q7L1Q6 419 aaKnown RBP17.49■□□□□ 0.39
FAM3A-216ENST00000449971 B3GNT8Q7Z7M8 397 aa17.49■□□□□ 0.39
FAM3A-216ENST00000449971 CLEC14AQ86T13 490 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms