RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 TMCC1O94876 653 aa12.51□□□□□ -0.41
AC004540.1-204ENST00000449537 LETM1O95202 739 aaPredicted RBP12.51□□□□□ -0.41
AC004540.1-204ENST00000449537 PIGNO95427 931 aa12.51□□□□□ -0.41
AC004540.1-204ENST00000449537 FGF5P12034 268 aa12.51□□□□□ -0.41
AC004540.1-204ENST00000449537 SSTR2P30874 369 aa12.51□□□□□ -0.41
AC004540.1-204ENST00000449537 RHOAP61586 193 aa12.51□□□□□ -0.41
AC004540.1-204ENST00000449537 SH3BP2P78314 561 aa12.51□□□□□ -0.41
AC004540.1-204ENST00000449537 HHEXQ03014 270 aa12.51□□□□□ -0.41
AC004540.1-204ENST00000449537 DEUP1Q05D60 604 aa12.51□□□□□ -0.41
AC004540.1-204ENST00000449537 NFATC2Q13469 925 aa12.51□□□□□ -0.41
AC004540.1-204ENST00000449537 IL10RAQ13651 578 aa12.51□□□□□ -0.41
AC004540.1-204ENST00000449537 GRM3Q14832 879 aa12.51□□□□□ -0.41
AC004540.1-204ENST00000449537 SMTNL2Q2TAL5 461 aa12.51□□□□□ -0.41
AC004540.1-204ENST00000449537 VWA2Q5GFL6 755 aa12.51□□□□□ -0.41
AC004540.1-204ENST00000449537 MYO7BQ6PIF6 2116 aa12.51□□□□□ -0.41
AC004540.1-204ENST00000449537 BRAT1Q6PJG6 821 aa12.51□□□□□ -0.41
AC004540.1-204ENST00000449537 LIPIQ6XZB0 460 aa12.51□□□□□ -0.41
AC004540.1-204ENST00000449537 KRBA2Q6ZNG9 492 aa12.51□□□□□ -0.41
AC004540.1-204ENST00000449537 C11orf57Q6ZUT1 292 aaPredicted RBP12.51□□□□□ -0.41
AC004540.1-204ENST00000449537 FJX1Q86VR8 437 aa12.51□□□□□ -0.41
AC004540.1-204ENST00000449537 ZGRF1Q86YA3 2104 aa12.51□□□□□ -0.41
AC004540.1-204ENST00000449537 ZNF295-AS1Q8N0V1 137 aa12.51□□□□□ -0.41
AC004540.1-204ENST00000449537 PELI3Q8N2H9 469 aa12.51□□□□□ -0.41
AC004540.1-204ENST00000449537 SFRP1Q8N474 314 aa12.51□□□□□ -0.41
AC004540.1-204ENST00000449537 GLIS1Q8NBF1 620 aa12.51□□□□□ -0.41
AC004540.1-204ENST00000449537 NETO2Q8NC67 525 aa12.51□□□□□ -0.41
AC004540.1-204ENST00000449537 PTCD2Q8WV60 388 aaKnown RBP12.51□□□□□ -0.41
AC004540.1-204ENST00000449537 CCDC47Q96A33 483 aaKnown RBP12.51□□□□□ -0.41
AC004540.1-204ENST00000449537 NPY6RQ99463 290 aa12.51□□□□□ -0.41
AC004540.1-204ENST00000449537 FRMD8Q9BZ67 464 aaPredicted RBP12.51□□□□□ -0.41
AC004540.1-204ENST00000449537 TRIM8Q9BZR9 551 aa12.51□□□□□ -0.41
AC004540.1-204ENST00000449537 BRD8Q9H0E9 1235 aa12.51□□□□□ -0.41
AC004540.1-204ENST00000449537 MAGEH1Q9H213 219 aa12.51□□□□□ -0.41
AC004540.1-204ENST00000449537 GOLPH3LQ9H4A5 285 aa12.51□□□□□ -0.41
AC004540.1-204ENST00000449537 TMEM51Q9NW97 253 aa12.51□□□□□ -0.41
AC004540.1-204ENST00000449537 FARSAQ9Y285 508 aaKnown RBP12.51□□□□□ -0.41
AC004540.1-204ENST00000449537 DCHS2Q6V1P9 2916 aa12.5□□□□□ -0.41
AC004540.1-204ENST00000449537 KDELR3O43731 214 aa12.5□□□□□ -0.41
AC004540.1-204ENST00000449537 GADD45BO75293 160 aaPredicted RBP12.5□□□□□ -0.41
AC004540.1-204ENST00000449537 DAB1O75553 588 aa12.5□□□□□ -0.41
AC004540.1-204ENST00000449537 TMEM63AO94886 807 aa12.5□□□□□ -0.41
AC004540.1-204ENST00000449537 ELFN1P0C7U0 828 aa12.5□□□□□ -0.41
AC004540.1-204ENST00000449537 CD99P14209 185 aa12.5□□□□□ -0.41
AC004540.1-204ENST00000449537 DRD2P14416 443 aa12.5□□□□□ -0.41
AC004540.1-204ENST00000449537 TFE3P19532 575 aaPredicted RBP12.5□□□□□ -0.41
AC004540.1-204ENST00000449537 HTR1EP28566 365 aa12.5□□□□□ -0.41
AC004540.1-204ENST00000449537 POLD2P49005 469 aa12.5□□□□□ -0.41
AC004540.1-204ENST00000449537 EPHA4P54764 986 aa12.5□□□□□ -0.41
AC004540.1-204ENST00000449537 PTK2Q05397 1052 aa12.5□□□□□ -0.41
AC004540.1-204ENST00000449537 ACOX1Q15067 660 aa12.5□□□□□ -0.41
AC004540.1-204ENST00000449537 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.5□□□□□ -0.41
AC004540.1-204ENST00000449537 ZCWPW2Q504Y3 356 aa12.5□□□□□ -0.41
AC004540.1-204ENST00000449537 OTUD1Q5VV17 481 aaPredicted RBP12.5□□□□□ -0.41
AC004540.1-204ENST00000449537 LYPLAL1Q5VWZ2 237 aa12.5□□□□□ -0.41
AC004540.1-204ENST00000449537 FAM199XQ6PEV8 388 aaPredicted RBP12.5□□□□□ -0.41
AC004540.1-204ENST00000449537 RRAGAQ7L523 313 aa12.5□□□□□ -0.41
AC004540.1-204ENST00000449537 KCNMB4Q86W47 210 aa12.5□□□□□ -0.41
AC004540.1-204ENST00000449537 PPP1R3BQ86XI6 285 aa12.5□□□□□ -0.41
AC004540.1-204ENST00000449537 NXPE1Q8N323 547 aa12.5□□□□□ -0.41
AC004540.1-204ENST00000449537 CASKIN2Q8WXE0 1202 aa12.5□□□□□ -0.41
AC004540.1-204ENST00000449537 C9orf72Q96LT7 481 aa12.5□□□□□ -0.41
AC004540.1-204ENST00000449537 ZNF641Q96N77 438 aaPredicted RBP12.5□□□□□ -0.41
AC004540.1-204ENST00000449537 CPXM1Q96SM3 734 aa12.5□□□□□ -0.41
AC004540.1-204ENST00000449537 TEX101Q9BY14 249 aa12.5□□□□□ -0.41
AC004540.1-204ENST00000449537 EPB41L1Q9H4G0 881 aa12.5□□□□□ -0.41
AC004540.1-204ENST00000449537 STN1Q9H668 368 aaKnown RBP12.5□□□□□ -0.41
AC004540.1-204ENST00000449537 AKIRIN1Q9H9L7 192 aaPredicted RBP12.5□□□□□ -0.41
AC004540.1-204ENST00000449537 SARS2Q9NP81 518 aaKnown RBP12.5□□□□□ -0.41
AC004540.1-204ENST00000449537 PPARGC1AQ9UBK2 798 aaKnown RBP12.5□□□□□ -0.41
AC004540.1-204ENST00000449537 DNAI1Q9UI46 699 aa12.5□□□□□ -0.41
AC004540.1-204ENST00000449537 NTNG1Q9Y2I2 539 aa12.5□□□□□ -0.41
AC004540.1-204ENST00000449537 SMC2O95347 1197 aa12.49□□□□□ -0.41
AC004540.1-204ENST00000449537 IVLP07476 585 aa12.49□□□□□ -0.41
AC004540.1-204ENST00000449537 KRT5P13647 590 aa12.49□□□□□ -0.41
AC004540.1-204ENST00000449537 SULT1E1P49888 294 aa12.49□□□□□ -0.41
AC004540.1-204ENST00000449537 SEPHS1P49903 392 aa12.49□□□□□ -0.41
AC004540.1-204ENST00000449537 KRTAP10-9P60411 292 aa12.49□□□□□ -0.41
AC004540.1-204ENST00000449537 PDE1BQ01064 536 aa12.49□□□□□ -0.41
AC004540.1-204ENST00000449537 SLC6A3Q01959 620 aa12.49□□□□□ -0.41
AC004540.1-204ENST00000449537 RALGDSQ12967 914 aa12.49□□□□□ -0.41
AC004540.1-204ENST00000449537 ZNF630Q2M218 657 aaPredicted RBP12.49□□□□□ -0.41
AC004540.1-204ENST00000449537 INO80DQ53TQ3 878 aaPredicted RBP12.49□□□□□ -0.41
AC004540.1-204ENST00000449537 MIIPQ5JXC2 388 aa12.49□□□□□ -0.41
AC004540.1-204ENST00000449537 VWA5B1Q5TIE3 1220 aa12.49□□□□□ -0.41
AC004540.1-204ENST00000449537 AFMIDQ63HM1 303 aa12.49□□□□□ -0.41
AC004540.1-204ENST00000449537 ZNF517Q6ZMY9 492 aaPredicted RBP12.49□□□□□ -0.41
AC004540.1-204ENST00000449537 FAM183BPQ6ZVS7 135 aa12.49□□□□□ -0.41
AC004540.1-204ENST00000449537 MED25Q71SY5 747 aa12.49□□□□□ -0.41
AC004540.1-204ENST00000449537 ZNF354CQ86Y25 554 aa12.49□□□□□ -0.41
AC004540.1-204ENST00000449537 ARFGAP1Q8N6T3 406 aa12.49□□□□□ -0.41
AC004540.1-204ENST00000449537 TMEM102Q8N9M5 508 aaPredicted RBP12.49□□□□□ -0.41
AC004540.1-204ENST00000449537 PGAP3Q96FM1 320 aaPredicted RBP12.49□□□□□ -0.41
AC004540.1-204ENST00000449537 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.49□□□□□ -0.41
AC004540.1-204ENST00000449537 NUP62CLQ9H1M0 184 aa12.49□□□□□ -0.41
AC004540.1-204ENST00000449537 CLSTN2Q9H4D0 955 aa12.49□□□□□ -0.41
AC004540.1-204ENST00000449537 NDFIP2Q9NV92 336 aa12.49□□□□□ -0.41
AC004540.1-204ENST00000449537 RMND1Q9NWS8 449 aa12.49□□□□□ -0.41
AC004540.1-204ENST00000449537 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.49□□□□□ -0.41
AC004540.1-204ENST00000449537 STAP1Q9ULZ2 295 aa12.49□□□□□ -0.41
AC004540.1-204ENST00000449537 SLC17A4Q9Y2C5 497 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms