RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 ARHGAP26Q9UNA1 814 aa16.08■□□□□ 0.16
AP000253.1-201ENST00000449339 ZNF510Q9Y2H8 683 aa16.08■□□□□ 0.16
AP000253.1-201ENST00000449339 HCFC2Q9Y5Z7 792 aa16.08■□□□□ 0.16
AP000253.1-201ENST00000449339 GBF1Q92538 1859 aa16.08■□□□□ 0.16
AP000253.1-201ENST00000449339 C2orf81A6NN90 581 aa16.07■□□□□ 0.16
AP000253.1-201ENST00000449339 SNUPNO95149 360 aaKnown RBP16.07■□□□□ 0.16
AP000253.1-201ENST00000449339 HOXB8P17481 243 aaPredicted RBP16.07■□□□□ 0.16
AP000253.1-201ENST00000449339 PTPN2P17706 415 aa16.07■□□□□ 0.16
AP000253.1-201ENST00000449339 ABL2P42684 1182 aa16.07■□□□□ 0.16
AP000253.1-201ENST00000449339 TAF1AQ15573 450 aaPredicted RBP16.07■□□□□ 0.16
AP000253.1-201ENST00000449339 TYSND1Q2T9J0 566 aa16.07■□□□□ 0.16
AP000253.1-201ENST00000449339 LSM12Q3MHD2 195 aaKnown RBP16.07■□□□□ 0.16
AP000253.1-201ENST00000449339 INO80DQ53TQ3 878 aaPredicted RBP16.07■□□□□ 0.16
AP000253.1-201ENST00000449339 C9orf50Q5SZB4 431 aa16.07■□□□□ 0.16
AP000253.1-201ENST00000449339 RBM23Q86U06 439 aaKnown RBP16.07■□□□□ 0.16
AP000253.1-201ENST00000449339 EFHBQ8N7U6 833 aa16.07■□□□□ 0.16
AP000253.1-201ENST00000449339 KDM1BQ8NB78 822 aa16.07■□□□□ 0.16
AP000253.1-201ENST00000449339 OR4K2Q8NGD2 314 aa16.07■□□□□ 0.16
AP000253.1-201ENST00000449339 USP13Q92995 863 aaPredicted RBP16.07■□□□□ 0.16
AP000253.1-201ENST00000449339 CLPTM1LQ96KA5 538 aa16.07■□□□□ 0.16
AP000253.1-201ENST00000449339 OSBPL1AQ9BXW6 950 aa16.07■□□□□ 0.16
AP000253.1-201ENST00000449339 ALG9Q9H6U8 611 aa16.07■□□□□ 0.16
AP000253.1-201ENST00000449339 INTS6Q9UL03 887 aaKnown RBP16.07■□□□□ 0.16
AP000253.1-201ENST00000449339 LOC100653049A0A140TA62 436 aa16.07■□□□□ 0.16
AP000253.1-201ENST00000449339 KRT34O76011 436 aa16.07■□□□□ 0.16
AP000253.1-201ENST00000449339 PRAMEF12O95522 483 aa16.07■□□□□ 0.16
AP000253.1-201ENST00000449339 JUNP05412 331 aaKnown RBP16.07■□□□□ 0.16
AP000253.1-201ENST00000449339 HNRNPLP14866 589 aaKnown RBP eCLIP16.07■□□□□ 0.16
AP000253.1-201ENST00000449339 GKP32189 559 aa16.07■□□□□ 0.16
AP000253.1-201ENST00000449339 PLK1P53350 603 aa16.07■□□□□ 0.16
AP000253.1-201ENST00000449339 EPHA5P54756 1037 aa16.07■□□□□ 0.16
AP000253.1-201ENST00000449339 SLC25A3Q00325 362 aa16.07■□□□□ 0.16
AP000253.1-201ENST00000449339 SH2D4BQ5SQS7 431 aa16.07■□□□□ 0.16
AP000253.1-201ENST00000449339 ACAD11Q709F0 780 aa16.07■□□□□ 0.16
AP000253.1-201ENST00000449339 ISCA2Q86U28 154 aa16.07■□□□□ 0.16
AP000253.1-201ENST00000449339 ADGRE3Q9BY15 652 aa16.07■□□□□ 0.16
AP000253.1-201ENST00000449339 TMEM233B4DJY2 109 aa16.06■□□□□ 0.16
AP000253.1-201ENST00000449339 ANKRD66B4E2M5 251 aa16.06■□□□□ 0.16
AP000253.1-201ENST00000449339 CA3P07451 260 aa16.06■□□□□ 0.16
AP000253.1-201ENST00000449339 CTSOP43234 321 aaPredicted RBP16.06■□□□□ 0.16
AP000253.1-201ENST00000449339 TIAL1Q01085 375 aaKnown RBP eCLIP16.06■□□□□ 0.16
AP000253.1-201ENST00000449339 KLF10Q13118 480 aa16.06■□□□□ 0.16
AP000253.1-201ENST00000449339 NAA25Q14CX7 972 aa16.06■□□□□ 0.16
AP000253.1-201ENST00000449339 PDCD2Q16342 344 aaPredicted RBP16.06■□□□□ 0.16
AP000253.1-201ENST00000449339 TMEM25Q86YD3 366 aa16.06■□□□□ 0.16
AP000253.1-201ENST00000449339 ING5Q8WYH8 240 aa16.06■□□□□ 0.16
AP000253.1-201ENST00000449339 PHF21BQ96EK2 531 aa16.06■□□□□ 0.16
AP000253.1-201ENST00000449339 RPL10LQ96L21 214 aaKnown RBP16.06■□□□□ 0.16
AP000253.1-201ENST00000449339 ZSWIM3Q96MP5 696 aa16.06■□□□□ 0.16
AP000253.1-201ENST00000449339 C2orf49Q9BVC5 232 aaPredicted RBP16.06■□□□□ 0.16
AP000253.1-201ENST00000449339 INTS10Q9NVR2 710 aaKnown RBP16.06■□□□□ 0.16
AP000253.1-201ENST00000449339 CDYLQ9Y232 598 aa16.06■□□□□ 0.16
AP000253.1-201ENST00000449339 C15orf41Q9Y2V0 281 aa16.06■□□□□ 0.16
AP000253.1-201ENST00000449339 GNAZP19086 355 aa16.06■□□□□ 0.16
AP000253.1-201ENST00000449339 KCNC1P48547 511 aa16.06■□□□□ 0.16
AP000253.1-201ENST00000449339 PLEKHG6Q3KR16 790 aa16.06■□□□□ 0.16
AP000253.1-201ENST00000449339 AFTPHQ6ULP2 937 aa16.06■□□□□ 0.16
AP000253.1-201ENST00000449339 GRASPQ7Z6J2 395 aaPredicted RBP16.06■□□□□ 0.16
AP000253.1-201ENST00000449339 SLC22A9Q8IVM8 553 aa16.06■□□□□ 0.16
AP000253.1-201ENST00000449339 FIBINQ8TAL6 211 aa16.06■□□□□ 0.16
AP000253.1-201ENST00000449339 STON2Q8WXE9 905 aa16.06■□□□□ 0.16
AP000253.1-201ENST00000449339 TACO1Q9BSH4 297 aaKnown RBP16.06■□□□□ 0.16
AP000253.1-201ENST00000449339 TNKS2Q9H2K2 1166 aa16.06■□□□□ 0.16
AP000253.1-201ENST00000449339 LINC00597Q9H2U6 94 aa16.06■□□□□ 0.16
AP000253.1-201ENST00000449339 CERS4Q9HA82 394 aa16.06■□□□□ 0.16
AP000253.1-201ENST00000449339 ABCB8Q9NUT2 735 aa16.06■□□□□ 0.16
AP000253.1-201ENST00000449339 SLC7A8Q9UHI5 535 aa16.06■□□□□ 0.16
AP000253.1-201ENST00000449339 EVLQ9UI08 416 aaPredicted RBP16.06■□□□□ 0.16
AP000253.1-201ENST00000449339 PCDHB9Q9Y5E1 797 aa16.06■□□□□ 0.16
AP000253.1-201ENST00000449339 C5orf67F2Z3F1 127 aa16.05■□□□□ 0.16
AP000253.1-201ENST00000449339 COX4I1P13073 169 aa16.05■□□□□ 0.16
AP000253.1-201ENST00000449339 ZNF37AP17032 561 aaPredicted RBP16.05■□□□□ 0.16
AP000253.1-201ENST00000449339 PRDX6P30041 224 aa16.05■□□□□ 0.16
AP000253.1-201ENST00000449339 STK19P49842 368 aaPredicted RBP16.05■□□□□ 0.16
AP000253.1-201ENST00000449339 SUOXP51687 545 aa16.05■□□□□ 0.16
AP000253.1-201ENST00000449339 CBX2Q14781 532 aaPredicted RBP16.05■□□□□ 0.16
AP000253.1-201ENST00000449339 ASTLQ6HA08 431 aaPredicted RBP16.05■□□□□ 0.16
AP000253.1-201ENST00000449339 CAMK1DQ8IU85 385 aa16.05■□□□□ 0.16
AP000253.1-201ENST00000449339 FAM136AQ96C01 138 aa16.05■□□□□ 0.16
AP000253.1-201ENST00000449339 AARSD1Q9BTE6 412 aaKnown RBP16.05■□□□□ 0.16
AP000253.1-201ENST00000449339 POPDC3Q9HBV1 291 aa16.05■□□□□ 0.16
AP000253.1-201ENST00000449339 BPIFA1Q9NP55 256 aa16.05■□□□□ 0.16
AP000253.1-201ENST00000449339 GTSE1Q9NYZ3 720 aa16.05■□□□□ 0.16
AP000253.1-201ENST00000449339 KIAA1522Q9P206 1035 aaPredicted RBP16.05■□□□□ 0.16
AP000253.1-201ENST00000449339 FNDC3AQ9Y2H6 1198 aaKnown RBP16.05■□□□□ 0.16
AP000253.1-201ENST00000449339 RWDD3Q9Y3V2 267 aa16.05■□□□□ 0.16
AP000253.1-201ENST00000449339 CEP290O15078 2479 aa16.05■□□□□ 0.16
AP000253.1-201ENST00000449339 UBA6A0AVT1 1052 aaPredicted RBP16.04■□□□□ 0.16
AP000253.1-201ENST00000449339 CD1DP15813 335 aa16.04■□□□□ 0.16
AP000253.1-201ENST00000449339 CTPS1P17812 591 aa16.04■□□□□ 0.16
AP000253.1-201ENST00000449339 LPOP22079 712 aaPredicted RBP16.04■□□□□ 0.16
AP000253.1-201ENST00000449339 SP100P23497 879 aaPredicted RBP16.04■□□□□ 0.16
AP000253.1-201ENST00000449339 PSMA3P25788 255 aa16.04■□□□□ 0.16
AP000253.1-201ENST00000449339 HLA-FP30511 346 aa16.04■□□□□ 0.16
AP000253.1-201ENST00000449339 GTF2A1P52655 376 aaPredicted RBP16.04■□□□□ 0.16
AP000253.1-201ENST00000449339 UBE3AQ05086 875 aa16.04■□□□□ 0.16
AP000253.1-201ENST00000449339 MPP7Q5T2T1 576 aa16.04■□□□□ 0.16
AP000253.1-201ENST00000449339 RETSATQ6NUM9 610 aa16.04■□□□□ 0.16
AP000253.1-201ENST00000449339 FRMD7Q6ZUT3 714 aa16.04■□□□□ 0.16
AP000253.1-201ENST00000449339 NET1Q7Z628 596 aaPredicted RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms