RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 C1QAP02745 245 aa14.58□□□□□ -0.07
TNF-208ENST00000449264 IVLP07476 585 aa14.58□□□□□ -0.07
TNF-208ENST00000449264 PRSS56P0CW18 603 aa14.58□□□□□ -0.07
TNF-208ENST00000449264 AOC1P19801 751 aa14.58□□□□□ -0.07
TNF-208ENST00000449264 PEX6Q13608 980 aa14.58□□□□□ -0.07
TNF-208ENST00000449264 ZRANB3Q5FWF4 1079 aa14.58□□□□□ -0.07
TNF-208ENST00000449264 SEL1L3Q68CR1 1132 aa14.58□□□□□ -0.07
TNF-208ENST00000449264 NEPROQ6NW34 567 aa14.58□□□□□ -0.07
TNF-208ENST00000449264 DENND6AQ8IWF6 608 aa14.58□□□□□ -0.07
TNF-208ENST00000449264 IQCKQ8N0W5 287 aa14.58□□□□□ -0.07
TNF-208ENST00000449264 PNPLA1Q8N8W4 532 aa14.58□□□□□ -0.07
TNF-208ENST00000449264 OR4L1Q8NH43 312 aa14.58□□□□□ -0.07
TNF-208ENST00000449264 FAM131CQ96AQ9 280 aa14.58□□□□□ -0.07
TNF-208ENST00000449264 PAFAH2Q99487 392 aa14.58□□□□□ -0.07
TNF-208ENST00000449264 FAM167BQ9BTA0 163 aa14.58□□□□□ -0.07
TNF-208ENST00000449264 FAM96AQ9H5X1 160 aa14.58□□□□□ -0.07
TNF-208ENST00000449264 CATSPERZQ9NTU4 200 aa14.58□□□□□ -0.07
TNF-208ENST00000449264 SPATA6Q9NWH7 488 aaPredicted RBP14.58□□□□□ -0.07
TNF-208ENST00000449264 EBF1Q9UH73 591 aa14.58□□□□□ -0.07
TNF-208ENST00000449264 SLC30A1Q9Y6M5 507 aa14.58□□□□□ -0.07
TNF-208ENST00000449264 TBC1D3DA0A087WVF3 549 aa14.58□□□□□ -0.08
TNF-208ENST00000449264 TBC1D3IA0A087WXS9 549 aa14.58□□□□□ -0.08
TNF-208ENST00000449264 TBC1D3EA0A087X179 549 aa14.58□□□□□ -0.08
TNF-208ENST00000449264 TBC1D3KA0A087X1G2 549 aa14.58□□□□□ -0.08
TNF-208ENST00000449264 TBC1D3FA6NER0 549 aaPredicted RBP14.58□□□□□ -0.08
TNF-208ENST00000449264 IGLON5A6NGN9 336 aa14.58□□□□□ -0.08
TNF-208ENST00000449264 TBC1D3LB9A6J9 549 aa14.58□□□□□ -0.08
TNF-208ENST00000449264 H7C0S8 307 aa14.58□□□□□ -0.08
TNF-208ENST00000449264 WNT9AO14904 365 aa14.58□□□□□ -0.08
TNF-208ENST00000449264 UGT1A9O60656 530 aa14.58□□□□□ -0.08
TNF-208ENST00000449264 RECQL5O94762 991 aaPredicted RBP14.58□□□□□ -0.08
TNF-208ENST00000449264 TBC1D3HP0C7X1 549 aa14.58□□□□□ -0.08
TNF-208ENST00000449264 C7P10643 843 aa14.58□□□□□ -0.08
TNF-208ENST00000449264 GM2AP17900 193 aa14.58□□□□□ -0.08
TNF-208ENST00000449264 ACSL1P33121 698 aa14.58□□□□□ -0.08
TNF-208ENST00000449264 SLC1A2P43004 574 aa14.58□□□□□ -0.08
TNF-208ENST00000449264 CXCL12P48061 93 aa14.58□□□□□ -0.08
TNF-208ENST00000449264 CCR3P51677 355 aa14.58□□□□□ -0.08
TNF-208ENST00000449264 ZNF844Q08AG5 666 aa14.58□□□□□ -0.08
TNF-208ENST00000449264 CTBP1Q13363 440 aa14.58□□□□□ -0.08
TNF-208ENST00000449264 FASTKD1Q53R41 847 aaKnown RBP14.58□□□□□ -0.08
TNF-208ENST00000449264 CEP85LQ5SZL2 805 aa14.58□□□□□ -0.08
TNF-208ENST00000449264 TBC1D3GQ6DHY5 549 aa14.58□□□□□ -0.08
TNF-208ENST00000449264 TBC1D3CQ6IPX1 549 aa14.58□□□□□ -0.08
TNF-208ENST00000449264 LDB1Q86U70 411 aaPredicted RBP14.58□□□□□ -0.08
TNF-208ENST00000449264 LRRC6Q86X45 466 aa14.58□□□□□ -0.08
TNF-208ENST00000449264 TBC1D3Q8IZP1 549 aaPredicted RBP14.58□□□□□ -0.08
TNF-208ENST00000449264 SCAMP4Q969E2 229 aa14.58□□□□□ -0.08
TNF-208ENST00000449264 NUS1Q96E22 293 aa14.58□□□□□ -0.08
TNF-208ENST00000449264 DTD2Q96FN9 168 aa14.58□□□□□ -0.08
TNF-208ENST00000449264 IER2Q9BTL4 223 aa14.58□□□□□ -0.08
TNF-208ENST00000449264 BTBD1Q9H0C5 482 aa14.58□□□□□ -0.08
TNF-208ENST00000449264 UGT1A7Q9HAW7 530 aa14.58□□□□□ -0.08
TNF-208ENST00000449264 UGT1A10Q9HAW8 530 aa14.58□□□□□ -0.08
TNF-208ENST00000449264 UGT1A8Q9HAW9 530 aa14.58□□□□□ -0.08
TNF-208ENST00000449264 IL26Q9NPH9 171 aa14.58□□□□□ -0.08
TNF-208ENST00000449264 DLGAP2Q9P1A6 1054 aa14.58□□□□□ -0.08
TNF-208ENST00000449264 VPS18Q9P253 973 aa14.58□□□□□ -0.08
TNF-208ENST00000449264 USP36Q9P275 1121 aaKnown RBP14.58□□□□□ -0.08
TNF-208ENST00000449264 MARCH4Q9P2E8 410 aaPredicted RBP14.58□□□□□ -0.08
TNF-208ENST00000449264 TXNDC16Q9P2K2 825 aa14.58□□□□□ -0.08
TNF-208ENST00000449264 APPL1Q9UKG1 709 aa14.58□□□□□ -0.08
TNF-208ENST00000449264 PSAT1Q9Y617 370 aa14.58□□□□□ -0.08
TNF-208ENST00000449264 NFS1Q9Y697 457 aa14.58□□□□□ -0.08
TNF-208ENST00000449264 IKBKGQ9Y6K9 419 aa14.58□□□□□ -0.08
TNF-208ENST00000449264 PLXNB3Q9ULL4 1909 aa14.58□□□□□ -0.08
TNF-208ENST00000449264 A0A1W2PQU0 124 aa14.57□□□□□ -0.08
TNF-208ENST00000449264 TLDC2A0PJX2 215 aa14.57□□□□□ -0.08
TNF-208ENST00000449264 GAPDHSO14556 408 aaPredicted RBP14.57□□□□□ -0.08
TNF-208ENST00000449264 CD3EAPO15446 510 aaKnown RBP14.57□□□□□ -0.08
TNF-208ENST00000449264 RNGTTO60942 597 aaKnown RBP14.57□□□□□ -0.08
TNF-208ENST00000449264 FAM155BO75949 473 aa14.57□□□□□ -0.08
TNF-208ENST00000449264 TM7SF2O76062 418 aa14.57□□□□□ -0.08
TNF-208ENST00000449264 SRP72O76094 671 aaKnown RBP14.57□□□□□ -0.08
TNF-208ENST00000449264 INHBAP08476 426 aa14.57□□□□□ -0.08
TNF-208ENST00000449264 PSMA3P25788 255 aa14.57□□□□□ -0.08
TNF-208ENST00000449264 FOXN2P32314 431 aa14.57□□□□□ -0.08
TNF-208ENST00000449264 MAGEA9P43362 315 aa14.57□□□□□ -0.08
TNF-208ENST00000449264 CDKN1CP49918 316 aaPredicted RBP14.57□□□□□ -0.08
TNF-208ENST00000449264 EIF3BP55884 814 aaKnown RBP14.57□□□□□ -0.08
TNF-208ENST00000449264 XIAPP98170 497 aa14.57□□□□□ -0.08
TNF-208ENST00000449264 MPP1Q00013 466 aa14.57□□□□□ -0.08
TNF-208ENST00000449264 CHRNA6Q15825 494 aa14.57□□□□□ -0.08
TNF-208ENST00000449264 KRT71Q3SY84 523 aa14.57□□□□□ -0.08
TNF-208ENST00000449264 TEDDM1Q5T9Z0 273 aa14.57□□□□□ -0.08
TNF-208ENST00000449264 ZDHHC20Q5W0Z9 365 aa14.57□□□□□ -0.08
TNF-208ENST00000449264 PSAPL1Q6NUJ1 521 aa14.57□□□□□ -0.08
TNF-208ENST00000449264 ZNF449Q6P9G9 518 aa14.57□□□□□ -0.08
TNF-208ENST00000449264 CYS1Q717R9 158 aa14.57□□□□□ -0.08
TNF-208ENST00000449264 MARK2Q7KZI7 788 aaKnown RBP14.57□□□□□ -0.08
TNF-208ENST00000449264 CBARPQ8N350 705 aaPredicted RBP14.57□□□□□ -0.08
TNF-208ENST00000449264 CALML6Q8TD86 181 aa14.57□□□□□ -0.08
TNF-208ENST00000449264 KLK6Q92876 244 aa14.57□□□□□ -0.08
TNF-208ENST00000449264 COQ10AQ96MF6 247 aa14.57□□□□□ -0.08
TNF-208ENST00000449264 PLEKHG4BQ96PX9 1271 aa14.57□□□□□ -0.08
TNF-208ENST00000449264 RIOK2Q9BVS4 552 aaKnown RBP14.57□□□□□ -0.08
TNF-208ENST00000449264 SPATA16Q9BXB7 569 aa14.57□□□□□ -0.08
TNF-208ENST00000449264 FAM83DQ9H4H8 585 aa14.57□□□□□ -0.08
TNF-208ENST00000449264 ASB8Q9H765 288 aa14.57□□□□□ -0.08
TNF-208ENST00000449264 VIPAS39Q9H9C1 493 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms