RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 WDR26Q9H7D7 661 aa14.56□□□□□ -0.08
USP39-206ENST00000448971 C10orf88Q9H8K7 445 aa14.56□□□□□ -0.08
USP39-206ENST00000448971 PPP2R2CQ9Y2T4 447 aa14.56□□□□□ -0.08
USP39-206ENST00000448971 OR1A2Q9Y585 309 aa14.56□□□□□ -0.08
USP39-206ENST00000448971 A0A0U1RQS6 177 aa14.55□□□□□ -0.08
USP39-206ENST00000448971 C1orf232A0A0U1RR37 186 aa14.55□□□□□ -0.08
USP39-206ENST00000448971 CACNB4O00305 520 aaPredicted RBP14.55□□□□□ -0.08
USP39-206ENST00000448971 FFAR2O15552 330 aa14.55□□□□□ -0.08
USP39-206ENST00000448971 PMPCBO75439 489 aa14.55□□□□□ -0.08
USP39-206ENST00000448971 PIAS2O75928 621 aa14.55□□□□□ -0.08
USP39-206ENST00000448971 PRLP01236 227 aa14.55□□□□□ -0.08
USP39-206ENST00000448971 NME1P15531 152 aaKnown RBP14.55□□□□□ -0.08
USP39-206ENST00000448971 CKMT2P17540 419 aa14.55□□□□□ -0.08
USP39-206ENST00000448971 GM2AP17900 193 aa14.55□□□□□ -0.08
USP39-206ENST00000448971 FOXK1P85037 733 aa14.55□□□□□ -0.08
USP39-206ENST00000448971 ILKQ13418 452 aa14.55□□□□□ -0.08
USP39-206ENST00000448971 NFATC4Q14934 902 aa14.55□□□□□ -0.08
USP39-206ENST00000448971 SLC14A2Q15849 920 aa14.55□□□□□ -0.08
USP39-206ENST00000448971 ITPRIPL1Q6GPH6 555 aa14.55□□□□□ -0.08
USP39-206ENST00000448971 RAET1GQ6H3X3 334 aa14.55□□□□□ -0.08
USP39-206ENST00000448971 ESRP1Q6NXG1 681 aaKnown RBP14.55□□□□□ -0.08
USP39-206ENST00000448971 CRTC1Q6UUV9 634 aa14.55□□□□□ -0.08
USP39-206ENST00000448971 LRRC69Q6ZNQ3 347 aa14.55□□□□□ -0.08
USP39-206ENST00000448971 PHACTR4Q8IZ21 702 aa14.55□□□□□ -0.08
USP39-206ENST00000448971 TTC13Q8NBP0 860 aa14.55□□□□□ -0.08
USP39-206ENST00000448971 PLA2G15Q8NCC3 412 aa14.55□□□□□ -0.08
USP39-206ENST00000448971 ATL2Q8NHH9 583 aa14.55□□□□□ -0.08
USP39-206ENST00000448971 FGF11Q92914 225 aa14.55□□□□□ -0.08
USP39-206ENST00000448971 APOOQ9BUR5 198 aa14.55□□□□□ -0.08
USP39-206ENST00000448971 MLPHQ9BV36 600 aaPredicted RBP14.55□□□□□ -0.08
USP39-206ENST00000448971 KCTD5Q9NXV2 234 aa14.55□□□□□ -0.08
USP39-206ENST00000448971 UBP1Q9NZI7 540 aa14.55□□□□□ -0.08
USP39-206ENST00000448971 APOBEC3BQ9UH17 382 aaKnown RBP14.55□□□□□ -0.08
USP39-206ENST00000448971 CD84Q9UIB8 345 aa14.55□□□□□ -0.08
USP39-206ENST00000448971 PPIL1Q9Y3C6 166 aa14.55□□□□□ -0.08
USP39-206ENST00000448971 TDRD6O60522 2096 aaKnown RBP14.54□□□□□ -0.08
USP39-206ENST00000448971 KCNN4O15554 427 aa14.54□□□□□ -0.08
USP39-206ENST00000448971 RRP8O43159 456 aaKnown RBP14.54□□□□□ -0.08
USP39-206ENST00000448971 ZNF189O75820 626 aaPredicted RBP14.54□□□□□ -0.08
USP39-206ENST00000448971 CSF2P04141 144 aa14.54□□□□□ -0.08
USP39-206ENST00000448971 ALPPL2P10696 532 aa14.54□□□□□ -0.08
USP39-206ENST00000448971 TSHRP16473 764 aa14.54□□□□□ -0.08
USP39-206ENST00000448971 JUNDP17535 347 aa14.54□□□□□ -0.08
USP39-206ENST00000448971 CD68P34810 354 aaPredicted RBP14.54□□□□□ -0.08
USP39-206ENST00000448971 CDK18Q07002 472 aa14.54□□□□□ -0.08
USP39-206ENST00000448971 RPS6KA1Q15418 735 aa14.54□□□□□ -0.08
USP39-206ENST00000448971 QPCTQ16769 361 aa14.54□□□□□ -0.08
USP39-206ENST00000448971 CCDC70Q6NSX1 233 aa14.54□□□□□ -0.08
USP39-206ENST00000448971 PCSK4Q6UW60 755 aa14.54□□□□□ -0.08
USP39-206ENST00000448971 ENPP7Q6UWV6 458 aa14.54□□□□□ -0.08
USP39-206ENST00000448971 ZNF662Q6ZS27 426 aa14.54□□□□□ -0.08
USP39-206ENST00000448971 Q6ZVL8 140 aa14.54□□□□□ -0.08
USP39-206ENST00000448971 RBFAQ8N0V3 343 aa14.54□□□□□ -0.08
USP39-206ENST00000448971 ZNF548Q8NEK5 533 aaPredicted RBP14.54□□□□□ -0.08
USP39-206ENST00000448971 TRIM58Q8NG06 486 aa14.54□□□□□ -0.08
USP39-206ENST00000448971 COL26A1Q96A83 441 aa14.54□□□□□ -0.08
USP39-206ENST00000448971 WDR92Q96MX6 357 aa14.54□□□□□ -0.08
USP39-206ENST00000448971 FCRL3Q96P31 734 aaPredicted RBP14.54□□□□□ -0.08
USP39-206ENST00000448971 FSD1LQ9BXM9 530 aa14.54□□□□□ -0.08
USP39-206ENST00000448971 GBA3Q9H227 469 aa14.54□□□□□ -0.08
USP39-206ENST00000448971 UCKL1Q9NWZ5 548 aa14.54□□□□□ -0.08
USP39-206ENST00000448971 KLQ9UEF7 1012 aa14.54□□□□□ -0.08
USP39-206ENST00000448971 FAM153AQ9UHL3 310 aa14.54□□□□□ -0.08
USP39-206ENST00000448971 TRHDEQ9UKU6 1024 aa14.54□□□□□ -0.08
USP39-206ENST00000448971 LRRK1Q38SD2 2015 aa14.54□□□□□ -0.08
USP39-206ENST00000448971 ANKRD66B4E2M5 251 aa14.53□□□□□ -0.08
USP39-206ENST00000448971 BRINP1O60477 761 aa14.53□□□□□ -0.08
USP39-206ENST00000448971 CLDN7O95471 211 aa14.53□□□□□ -0.08
USP39-206ENST00000448971 KELP23276 732 aa14.53□□□□□ -0.08
USP39-206ENST00000448971 DGKAP23743 735 aa14.53□□□□□ -0.08
USP39-206ENST00000448971 ACP1P24666 158 aa14.53□□□□□ -0.08
USP39-206ENST00000448971 KIAA1024LP59773 190 aa14.53□□□□□ -0.08
USP39-206ENST00000448971 INSM1Q01101 510 aaPredicted RBP14.53□□□□□ -0.08
USP39-206ENST00000448971 PPARDQ03181 441 aa14.53□□□□□ -0.08
USP39-206ENST00000448971 EIF2B5Q13144 721 aaKnown RBP14.53□□□□□ -0.08
USP39-206ENST00000448971 PROX2Q3B8N5 592 aa14.53□□□□□ -0.08
USP39-206ENST00000448971 FAXCQ5TGI0 409 aa14.53□□□□□ -0.08
USP39-206ENST00000448971 MEI1Q5TIA1 1274 aa14.53□□□□□ -0.08
USP39-206ENST00000448971 RD3Q7Z3Z2 195 aa14.53□□□□□ -0.08
USP39-206ENST00000448971 HEATR4Q86WZ0 1026 aa14.53□□□□□ -0.08
USP39-206ENST00000448971 ZNF843Q8N446 348 aa14.53□□□□□ -0.08
USP39-206ENST00000448971 DCBLD1Q8N8Z6 715 aa14.53□□□□□ -0.08
USP39-206ENST00000448971 IPMKQ8NFU5 416 aa14.53□□□□□ -0.08
USP39-206ENST00000448971 CCHCR1Q8TD31 782 aa14.53□□□□□ -0.08
USP39-206ENST00000448971 LMX1AQ8TE12 382 aa14.53□□□□□ -0.08
USP39-206ENST00000448971 BTN2A2Q8WVV5 523 aa14.53□□□□□ -0.08
USP39-206ENST00000448971 AP2M1Q96CW1 435 aa14.53□□□□□ -0.08
USP39-206ENST00000448971 PDXPQ96GD0 296 aa14.53□□□□□ -0.08
USP39-206ENST00000448971 FCRL5Q96RD9 977 aa14.53□□□□□ -0.08
USP39-206ENST00000448971 TRIB3Q96RU7 358 aa14.53□□□□□ -0.08
USP39-206ENST00000448971 SLC13A1Q9BZW2 595 aa14.53□□□□□ -0.08
USP39-206ENST00000448971 CAAP1Q9H8G2 361 aa14.53□□□□□ -0.08
USP39-206ENST00000448971 PHPT1Q9NRX4 125 aaPredicted RBP14.53□□□□□ -0.08
USP39-206ENST00000448971 PKD2L2Q9NZM6 624 aa14.53□□□□□ -0.08
USP39-206ENST00000448971 SPASTQ9UBP0 616 aa14.53□□□□□ -0.08
USP39-206ENST00000448971 NEMP2A6NFY4 417 aa14.52□□□□□ -0.09
USP39-206ENST00000448971 K7ESM1 405 aa14.52□□□□□ -0.09
USP39-206ENST00000448971 AQP9O43315 295 aa14.52□□□□□ -0.09
USP39-206ENST00000448971 RASGRP1O95267 797 aa14.52□□□□□ -0.09
USP39-206ENST00000448971 NDST3O95803 873 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms