RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 TEDDM1Q5T9Z0 273 aa19.47■□□□□ 0.71
SGCE-207ENST00000447873 ZNF470Q6ECI4 717 aa19.47■□□□□ 0.71
SGCE-207ENST00000447873 FAM151BQ6UXP7 276 aa19.47■□□□□ 0.71
SGCE-207ENST00000447873 RFLNAQ6ZTI6 216 aa19.47■□□□□ 0.71
SGCE-207ENST00000447873 RAVER1Q8IY67 606 aaKnown RBP19.47■□□□□ 0.71
SGCE-207ENST00000447873 GPR26Q8NDV2 337 aa19.47■□□□□ 0.71
SGCE-207ENST00000447873 EPS8L3Q8TE67 593 aaKnown RBP19.47■□□□□ 0.71
SGCE-207ENST00000447873 ZBTB9Q96C00 473 aa19.47■□□□□ 0.71
SGCE-207ENST00000447873 PLEKHG4BQ96PX9 1271 aa19.47■□□□□ 0.71
SGCE-207ENST00000447873 PAFAH2Q99487 392 aa19.47■□□□□ 0.71
SGCE-207ENST00000447873 AGAP2Q99490 1192 aa19.47■□□□□ 0.71
SGCE-207ENST00000447873 ACBD3Q9H3P7 528 aa19.47■□□□□ 0.71
SGCE-207ENST00000447873 PPCSQ9HAB8 311 aa19.47■□□□□ 0.71
SGCE-207ENST00000447873 IL26Q9NPH9 171 aa19.47■□□□□ 0.71
SGCE-207ENST00000447873 CATSPERZQ9NTU4 200 aa19.47■□□□□ 0.71
SGCE-207ENST00000447873 TXNDC16Q9P2K2 825 aa19.47■□□□□ 0.71
SGCE-207ENST00000447873 FETUBQ9UGM5 382 aa19.47■□□□□ 0.71
SGCE-207ENST00000447873 CD84Q9UIB8 345 aa19.47■□□□□ 0.71
SGCE-207ENST00000447873 SLC30A1Q9Y6M5 507 aa19.47■□□□□ 0.71
SGCE-207ENST00000447873 NUMA1Q14980 2115 aa19.46■□□□□ 0.71
SGCE-207ENST00000447873 SMIM23A6NLE4 172 aa19.46■□□□□ 0.71
SGCE-207ENST00000447873 RASGRF2O14827 1237 aa19.46■□□□□ 0.71
SGCE-207ENST00000447873 WNT9AO14904 365 aa19.46■□□□□ 0.71
SGCE-207ENST00000447873 TCEA3O75764 348 aa19.46■□□□□ 0.71
SGCE-207ENST00000447873 SLCO1A2P46721 670 aa19.46■□□□□ 0.71
SGCE-207ENST00000447873 CXCL12P48061 93 aa19.46■□□□□ 0.71
SGCE-207ENST00000447873 XIAPP98170 497 aa19.46■□□□□ 0.71
SGCE-207ENST00000447873 PEX6Q13608 980 aa19.46■□□□□ 0.71
SGCE-207ENST00000447873 FASTKD1Q53R41 847 aaKnown RBP19.46■□□□□ 0.71
SGCE-207ENST00000447873 MRNIPQ6NTE8 343 aa19.46■□□□□ 0.71
SGCE-207ENST00000447873 MICALCLQ6ZW33 695 aa19.46■□□□□ 0.71
SGCE-207ENST00000447873 MARK2Q7KZI7 788 aaKnown RBP19.46■□□□□ 0.71
SGCE-207ENST00000447873 TECPR1Q7Z6L1 1165 aa19.46■□□□□ 0.71
SGCE-207ENST00000447873 CNTN4Q8IWV2 1026 aa19.46■□□□□ 0.71
SGCE-207ENST00000447873 LMNTD2Q8IXW0 634 aa19.46■□□□□ 0.71
SGCE-207ENST00000447873 SGSM3Q96HU1 749 aa19.46■□□□□ 0.71
SGCE-207ENST00000447873 COQ10AQ96MF6 247 aa19.46■□□□□ 0.71
SGCE-207ENST00000447873 ROPN1BQ9BZX4 212 aaPredicted RBP19.46■□□□□ 0.71
SGCE-207ENST00000447873 CDH19Q9H159 772 aa19.46■□□□□ 0.71
SGCE-207ENST00000447873 FAM83DQ9H4H8 585 aa19.46■□□□□ 0.71
SGCE-207ENST00000447873 ROPN1Q9HAT0 212 aaPredicted RBP19.46■□□□□ 0.71
SGCE-207ENST00000447873 CD93Q9NPY3 652 aa19.46■□□□□ 0.71
SGCE-207ENST00000447873 NSMCE4AQ9NXX6 385 aa19.46■□□□□ 0.71
SGCE-207ENST00000447873 SLC17A6Q9P2U8 582 aa19.46■□□□□ 0.71
SGCE-207ENST00000447873 EBF1Q9UH73 591 aa19.46■□□□□ 0.71
SGCE-207ENST00000447873 SLC24A2Q9UI40 661 aa19.46■□□□□ 0.71
SGCE-207ENST00000447873 COQ6Q9Y2Z9 468 aa19.46■□□□□ 0.71
SGCE-207ENST00000447873 TBC1D3DA0A087WVF3 549 aa19.45■□□□□ 0.7
SGCE-207ENST00000447873 TBC1D3IA0A087WXS9 549 aa19.45■□□□□ 0.7
SGCE-207ENST00000447873 TBC1D3EA0A087X179 549 aa19.45■□□□□ 0.7
SGCE-207ENST00000447873 TBC1D3KA0A087X1G2 549 aa19.45■□□□□ 0.7
SGCE-207ENST00000447873 TLDC2A0PJX2 215 aa19.45■□□□□ 0.7
SGCE-207ENST00000447873 TBC1D3FA6NER0 549 aaPredicted RBP19.45■□□□□ 0.7
SGCE-207ENST00000447873 PRR23AA6NEV1 266 aa19.45■□□□□ 0.7
SGCE-207ENST00000447873 FAM47DPA6NHR8 397 aa19.45■□□□□ 0.7
SGCE-207ENST00000447873 TBC1D3LB9A6J9 549 aa19.45■□□□□ 0.7
SGCE-207ENST00000447873 PI15O43692 258 aa19.45■□□□□ 0.7
SGCE-207ENST00000447873 SRP72O76094 671 aaKnown RBP19.45■□□□□ 0.7
SGCE-207ENST00000447873 PRAMEF1O95521 474 aa19.45■□□□□ 0.7
SGCE-207ENST00000447873 INHBAP08476 426 aa19.45■□□□□ 0.7
SGCE-207ENST00000447873 TBC1D3HP0C7X1 549 aa19.45■□□□□ 0.7
SGCE-207ENST00000447873 AOC1P19801 751 aa19.45■□□□□ 0.7
SGCE-207ENST00000447873 CCR3P51677 355 aa19.45■□□□□ 0.7
SGCE-207ENST00000447873 KRT71Q3SY84 523 aa19.45■□□□□ 0.7
SGCE-207ENST00000447873 ZRANB3Q5FWF4 1079 aa19.45■□□□□ 0.7
SGCE-207ENST00000447873 TBC1D3GQ6DHY5 549 aa19.45■□□□□ 0.7
SGCE-207ENST00000447873 TBC1D3CQ6IPX1 549 aa19.45■□□□□ 0.7
SGCE-207ENST00000447873 CYP2U1Q7Z449 544 aa19.45■□□□□ 0.7
SGCE-207ENST00000447873 NRSN1Q8IZ57 195 aa19.45■□□□□ 0.7
SGCE-207ENST00000447873 TBC1D3Q8IZP1 549 aaPredicted RBP19.45■□□□□ 0.7
SGCE-207ENST00000447873 CAMKK1Q8N5S9 505 aa19.45■□□□□ 0.7
SGCE-207ENST00000447873 SLC44A1Q8WWI5 657 aa19.45■□□□□ 0.7
SGCE-207ENST00000447873 TMEM109Q9BVC6 243 aa19.45■□□□□ 0.7
SGCE-207ENST00000447873 BTBD1Q9H0C5 482 aa19.45■□□□□ 0.7
SGCE-207ENST00000447873 PREBQ9HCU5 417 aa19.45■□□□□ 0.7
SGCE-207ENST00000447873 USP36Q9P275 1121 aaKnown RBP19.45■□□□□ 0.7
SGCE-207ENST00000447873 TMEM221A6NGB7 291 aa19.44■□□□□ 0.7
SGCE-207ENST00000447873 IGLON5A6NGN9 336 aa19.44■□□□□ 0.7
SGCE-207ENST00000447873 M0R296 226 aa19.44■□□□□ 0.7
SGCE-207ENST00000447873 TM7SF2O76062 418 aa19.44■□□□□ 0.7
SGCE-207ENST00000447873 RECQL5O94762 991 aaPredicted RBP19.44■□□□□ 0.7
SGCE-207ENST00000447873 ITGALP20701 1170 aa19.44■□□□□ 0.7
SGCE-207ENST00000447873 FOXN2P32314 431 aa19.44■□□□□ 0.7
SGCE-207ENST00000447873 SLC1A2P43004 574 aa19.44■□□□□ 0.7
SGCE-207ENST00000447873 DCDC1P59894 354 aa19.44■□□□□ 0.7
SGCE-207ENST00000447873 RPS21P63220 83 aaKnown RBP19.44■□□□□ 0.7
SGCE-207ENST00000447873 CREB5Q02930 508 aa19.44■□□□□ 0.7
SGCE-207ENST00000447873 CACNG1Q06432 222 aa19.44■□□□□ 0.7
SGCE-207ENST00000447873 CTBP1Q13363 440 aa19.44■□□□□ 0.7
SGCE-207ENST00000447873 KIAA1161Q6NSJ0 714 aa19.44■□□□□ 0.7
SGCE-207ENST00000447873 SNX20Q7Z614 316 aa19.44■□□□□ 0.7
SGCE-207ENST00000447873 STRA8Q7Z7C7 330 aa19.44■□□□□ 0.7
SGCE-207ENST00000447873 SDCCAG8Q86SQ7 713 aaPredicted RBP19.44■□□□□ 0.7
SGCE-207ENST00000447873 CROCCP2Q86T23 111 aa19.44■□□□□ 0.7
SGCE-207ENST00000447873 SLC26A11Q86WA9 606 aa19.44■□□□□ 0.7
SGCE-207ENST00000447873 DENND6AQ8IWF6 608 aa19.44■□□□□ 0.7
SGCE-207ENST00000447873 GPR150Q8NGU9 434 aa19.44■□□□□ 0.7
SGCE-207ENST00000447873 SCAMP4Q969E2 229 aa19.44■□□□□ 0.7
SGCE-207ENST00000447873 DTD2Q96FN9 168 aa19.44■□□□□ 0.7
SGCE-207ENST00000447873 KDM4CQ9H3R0 1056 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms