RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 SEL1L3Q68CR1 1132 aa12.48□□□□□ -0.41
SSR4-205ENST00000447375 ALG1LQ6GMV1 187 aa12.48□□□□□ -0.41
SSR4-205ENST00000447375 KIAA1161Q6NSJ0 714 aa12.48□□□□□ -0.41
SSR4-205ENST00000447375 BORAQ6PGQ7 559 aa12.48□□□□□ -0.41
SSR4-205ENST00000447375 NPNTQ6UXI9 565 aa12.48□□□□□ -0.41
SSR4-205ENST00000447375 Q6ZSR6 202 aa12.48□□□□□ -0.41
SSR4-205ENST00000447375 BZW1Q7L1Q6 419 aaKnown RBP12.48□□□□□ -0.41
SSR4-205ENST00000447375 RAB11FIP2Q7L804 512 aa12.48□□□□□ -0.41
SSR4-205ENST00000447375 PEX26Q7Z412 305 aa12.48□□□□□ -0.41
SSR4-205ENST00000447375 ZSCAN30Q86W11 494 aa12.48□□□□□ -0.41
SSR4-205ENST00000447375 CCDC13Q8IYE1 715 aa12.48□□□□□ -0.41
SSR4-205ENST00000447375 LRRN4Q8WUT4 740 aa12.48□□□□□ -0.41
SSR4-205ENST00000447375 UBE2Q2Q8WVN8 375 aa12.48□□□□□ -0.41
SSR4-205ENST00000447375 ALG3Q92685 438 aa12.48□□□□□ -0.41
SSR4-205ENST00000447375 EPB41L5Q9HCM4 733 aa12.48□□□□□ -0.41
SSR4-205ENST00000447375 NT5MQ9NPB1 228 aa12.48□□□□□ -0.41
SSR4-205ENST00000447375 RBM22Q9NW64 420 aaKnown RBP eCLIP12.48□□□□□ -0.41
SSR4-205ENST00000447375 AMFRQ9UKV5 643 aa12.48□□□□□ -0.41
SSR4-205ENST00000447375 PLAAQ9Y263 795 aa12.48□□□□□ -0.41
SSR4-205ENST00000447375 PCDHB11Q9Y5F2 797 aa12.48□□□□□ -0.41
SSR4-205ENST00000447375 TLN1Q9Y490 2541 aaKnown RBP12.47□□□□□ -0.41
SSR4-205ENST00000447375 TTC24A2A3L6 582 aaPredicted RBP12.47□□□□□ -0.41
SSR4-205ENST00000447375 MIF4GDA9UHW6 222 aaKnown RBP12.47□□□□□ -0.41
SSR4-205ENST00000447375 H3BM21 787 aa12.47□□□□□ -0.41
SSR4-205ENST00000447375 TMX2-CTNND1H3BSU7 103 aa12.47□□□□□ -0.41
SSR4-205ENST00000447375 PPP1R12AO14974 1030 aaPredicted RBP12.47□□□□□ -0.41
SSR4-205ENST00000447375 NVLO15381 856 aaKnown RBP12.47□□□□□ -0.41
SSR4-205ENST00000447375 HTRA2O43464 458 aaPredicted RBP12.47□□□□□ -0.41
SSR4-205ENST00000447375 NRDCO43847 1150 aa12.47□□□□□ -0.41
SSR4-205ENST00000447375 SOCS5O75159 536 aa12.47□□□□□ -0.41
SSR4-205ENST00000447375 JCHAINP01591 159 aa12.47□□□□□ -0.41
SSR4-205ENST00000447375 CCDC175P0C221 793 aa12.47□□□□□ -0.41
SSR4-205ENST00000447375 PYGMP11217 842 aa12.47□□□□□ -0.41
SSR4-205ENST00000447375 HGFP14210 728 aa12.47□□□□□ -0.41
SSR4-205ENST00000447375 ITIH2P19823 946 aa12.47□□□□□ -0.41
SSR4-205ENST00000447375 HNRNPA2B1P22626 353 aaKnown RBP12.47□□□□□ -0.41
SSR4-205ENST00000447375 PTPN7P35236 360 aa12.47□□□□□ -0.41
SSR4-205ENST00000447375 RPIAP49247 311 aa12.47□□□□□ -0.41
SSR4-205ENST00000447375 MAXP61244 160 aa12.47□□□□□ -0.41
SSR4-205ENST00000447375 POLR2LP62875 67 aaKnown RBP12.47□□□□□ -0.41
SSR4-205ENST00000447375 DYNLT1P63172 113 aa12.47□□□□□ -0.41
SSR4-205ENST00000447375 IFI35P80217 286 aaPredicted RBP12.47□□□□□ -0.41
SSR4-205ENST00000447375 LLGL1Q15334 1064 aa12.47□□□□□ -0.41
SSR4-205ENST00000447375 KAZNQ674X7 775 aa12.47□□□□□ -0.41
SSR4-205ENST00000447375 BBS12Q6ZW61 710 aa12.47□□□□□ -0.41
SSR4-205ENST00000447375 ABI3BPQ7Z7G0 1075 aa12.47□□□□□ -0.41
SSR4-205ENST00000447375 ZSWIM9Q86XI8 627 aa12.47□□□□□ -0.41
SSR4-205ENST00000447375 DCP2Q8IU60 420 aaKnown RBP12.47□□□□□ -0.41
SSR4-205ENST00000447375 CCDC50Q8IVM0 306 aa12.47□□□□□ -0.41
SSR4-205ENST00000447375 ASB12Q8WXK4 309 aa12.47□□□□□ -0.41
SSR4-205ENST00000447375 IL12RB2Q99665 862 aa12.47□□□□□ -0.41
SSR4-205ENST00000447375 CCDC3Q9BQI4 270 aa12.47□□□□□ -0.41
SSR4-205ENST00000447375 C1QTNF2Q9BXJ5 285 aa12.47□□□□□ -0.41
SSR4-205ENST00000447375 SLC17A9Q9BYT1 436 aa12.47□□□□□ -0.41
SSR4-205ENST00000447375 STRADBQ9C0K7 418 aa12.47□□□□□ -0.41
SSR4-205ENST00000447375 POLR1EQ9GZS1 481 aaKnown RBP12.47□□□□□ -0.41
SSR4-205ENST00000447375 HAUS2Q9NVX0 235 aa12.47□□□□□ -0.41
SSR4-205ENST00000447375 SAE1Q9UBE0 346 aaPredicted RBP12.47□□□□□ -0.41
SSR4-205ENST00000447375 GGT7Q9UJ14 662 aa12.47□□□□□ -0.41
SSR4-205ENST00000447375 ATP8A1Q9Y2Q0 1164 aa12.47□□□□□ -0.41
SSR4-205ENST00000447375 PCDHGC4Q9Y5F7 938 aa12.47□□□□□ -0.41
SSR4-205ENST00000447375 CAPN6Q9Y6Q1 641 aa12.47□□□□□ -0.41
SSR4-205ENST00000447375 A0A1W2PQ67 120 aa12.46□□□□□ -0.41
SSR4-205ENST00000447375 IGLON5A6NGN9 336 aa12.46□□□□□ -0.41
SSR4-205ENST00000447375 KCNK1O00180 336 aa12.46□□□□□ -0.41
SSR4-205ENST00000447375 NEMP1O14524 444 aa12.46□□□□□ -0.41
SSR4-205ENST00000447375 TPP1O14773 563 aa12.46□□□□□ -0.41
SSR4-205ENST00000447375 AQP9O43315 295 aa12.46□□□□□ -0.41
SSR4-205ENST00000447375 PAK4O96013 591 aaPredicted RBP12.46□□□□□ -0.41
SSR4-205ENST00000447375 CSF2P04141 144 aa12.46□□□□□ -0.41
SSR4-205ENST00000447375 JMJD7P0C870 316 aa12.46□□□□□ -0.41
SSR4-205ENST00000447375 NME1P15531 152 aaKnown RBP12.46□□□□□ -0.41
SSR4-205ENST00000447375 PECAM1P16284 738 aaPredicted RBP12.46□□□□□ -0.41
SSR4-205ENST00000447375 POLE2P56282 527 aa12.46□□□□□ -0.41
SSR4-205ENST00000447375 ELP6Q0PNE2 266 aa12.46□□□□□ -0.41
SSR4-205ENST00000447375 AP1B1Q10567 949 aa12.46□□□□□ -0.41
SSR4-205ENST00000447375 FGL2Q14314 439 aa12.46□□□□□ -0.41
SSR4-205ENST00000447375 FZD2Q14332 565 aa12.46□□□□□ -0.41
SSR4-205ENST00000447375 IHHQ14623 411 aa12.46□□□□□ -0.41
SSR4-205ENST00000447375 PRKD1Q15139 912 aaPredicted RBP12.46□□□□□ -0.41
SSR4-205ENST00000447375 TMEM52BQ4KMG9 183 aa12.46□□□□□ -0.41
SSR4-205ENST00000447375 CFAP58Q5T655 872 aa12.46□□□□□ -0.41
SSR4-205ENST00000447375 GCNT7Q6ZNI0 430 aa12.46□□□□□ -0.41
SSR4-205ENST00000447375 B3GNT8Q7Z7M8 397 aa12.46□□□□□ -0.41
SSR4-205ENST00000447375 ATCAYQ86WG3 371 aa12.46□□□□□ -0.41
SSR4-205ENST00000447375 ZFAND4Q86XD8 727 aa12.46□□□□□ -0.41
SSR4-205ENST00000447375 UBL4BQ8N7F7 174 aa12.46□□□□□ -0.41
SSR4-205ENST00000447375 CNTD1Q8N815 330 aa12.46□□□□□ -0.41
SSR4-205ENST00000447375 ARRDC2Q8TBH0 407 aa12.46□□□□□ -0.41
SSR4-205ENST00000447375 FAM174AQ8TBP5 190 aa12.46□□□□□ -0.41
SSR4-205ENST00000447375 LMX1AQ8TE12 382 aa12.46□□□□□ -0.41
SSR4-205ENST00000447375 P3H4Q92791 437 aa12.46□□□□□ -0.41
SSR4-205ENST00000447375 GLMNQ92990 594 aa12.46□□□□□ -0.41
SSR4-205ENST00000447375 NAT6Q93015 286 aa12.46□□□□□ -0.41
SSR4-205ENST00000447375 HES6Q96HZ4 224 aa12.46□□□□□ -0.41
SSR4-205ENST00000447375 LENG8Q96PV6 779 aaPredicted RBP12.46□□□□□ -0.41
SSR4-205ENST00000447375 HERPUD2Q9BSE4 406 aa12.46□□□□□ -0.41
SSR4-205ENST00000447375 BOCQ9BWV1 1114 aa12.46□□□□□ -0.41
SSR4-205ENST00000447375 HEMGNQ9BXL5 484 aa12.46□□□□□ -0.41
SSR4-205ENST00000447375 OSBPL8Q9BZF1 889 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms