RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 CREB5Q02930 508 aa17.93■□□□□ 0.46
TRAPPC4-203ENST00000447216 IRF4Q15306 451 aa17.93■□□□□ 0.46
TRAPPC4-203ENST00000447216 SKIDA1Q1XH10 827 aa17.93■□□□□ 0.46
TRAPPC4-203ENST00000447216 WSCD2Q2TBF2 565 aa17.93■□□□□ 0.46
TRAPPC4-203ENST00000447216 UBAP2Q5T6F2 1119 aaKnown RBP17.93■□□□□ 0.46
TRAPPC4-203ENST00000447216 FAM151BQ6UXP7 276 aa17.93■□□□□ 0.46
TRAPPC4-203ENST00000447216 NLRP9Q7RTR0 991 aa17.93■□□□□ 0.46
TRAPPC4-203ENST00000447216 NRSN1Q8IZ57 195 aa17.93■□□□□ 0.46
TRAPPC4-203ENST00000447216 EIF1ADQ8N9N8 165 aaKnown RBP17.93■□□□□ 0.46
TRAPPC4-203ENST00000447216 PYROXD1Q8WU10 500 aa17.93■□□□□ 0.46
TRAPPC4-203ENST00000447216 HDAC10Q969S8 669 aa17.93■□□□□ 0.46
TRAPPC4-203ENST00000447216 HSPA12BQ96MM6 686 aa17.93■□□□□ 0.46
TRAPPC4-203ENST00000447216 AGAP2Q99490 1192 aa17.93■□□□□ 0.46
TRAPPC4-203ENST00000447216 RIOK2Q9BVS4 552 aaKnown RBP17.93■□□□□ 0.46
TRAPPC4-203ENST00000447216 PHACTR1Q9C0D0 580 aa17.93■□□□□ 0.46
TRAPPC4-203ENST00000447216 FAM83DQ9H4H8 585 aa17.93■□□□□ 0.46
TRAPPC4-203ENST00000447216 MBNL1Q9NR56 388 aaKnown RBP17.93■□□□□ 0.46
TRAPPC4-203ENST00000447216 TREX1Q9NSU2 369 aa17.93■□□□□ 0.46
TRAPPC4-203ENST00000447216 IL1RAPL1Q9NZN1 696 aa17.93■□□□□ 0.46
TRAPPC4-203ENST00000447216 RIMKLBQ9ULI2 386 aa17.93■□□□□ 0.46
TRAPPC4-203ENST00000447216 CA5BQ9Y2D0 317 aa17.93■□□□□ 0.46
TRAPPC4-203ENST00000447216 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.93■□□□□ 0.46
TRAPPC4-203ENST00000447216 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.93■□□□□ 0.46
TRAPPC4-203ENST00000447216 BPTFQ12830 3046 aa17.92■□□□□ 0.46
TRAPPC4-203ENST00000447216 MAGEB16A2A368 324 aa17.92■□□□□ 0.46
TRAPPC4-203ENST00000447216 CCDC162PA2VCL2 907 aa17.92■□□□□ 0.46
TRAPPC4-203ENST00000447216 METTL12A8MUP2 240 aa17.92■□□□□ 0.46
TRAPPC4-203ENST00000447216 MEI4A8MW99 385 aa17.92■□□□□ 0.46
TRAPPC4-203ENST00000447216 GAPDHSO14556 408 aaPredicted RBP17.92■□□□□ 0.46
TRAPPC4-203ENST00000447216 GPR39O43194 453 aa17.92■□□□□ 0.46
TRAPPC4-203ENST00000447216 LATO43561 262 aa17.92■□□□□ 0.46
TRAPPC4-203ENST00000447216 PCCBP05166 539 aa17.92■□□□□ 0.46
TRAPPC4-203ENST00000447216 PSMA3P25788 255 aa17.92■□□□□ 0.46
TRAPPC4-203ENST00000447216 SPAM1P38567 509 aa17.92■□□□□ 0.46
TRAPPC4-203ENST00000447216 NUBP1P53384 320 aa17.92■□□□□ 0.46
TRAPPC4-203ENST00000447216 XIAPP98170 497 aa17.92■□□□□ 0.46
TRAPPC4-203ENST00000447216 ACVR1Q04771 509 aa17.92■□□□□ 0.46
TRAPPC4-203ENST00000447216 CHRNA6Q15825 494 aa17.92■□□□□ 0.46
TRAPPC4-203ENST00000447216 UNC5AQ6ZN44 842 aa17.92■□□□□ 0.46
TRAPPC4-203ENST00000447216 CEP68Q76N32 757 aa17.92■□□□□ 0.46
TRAPPC4-203ENST00000447216 CYP2U1Q7Z449 544 aa17.92■□□□□ 0.46
TRAPPC4-203ENST00000447216 TMEM135Q86UB9 458 aa17.92■□□□□ 0.46
TRAPPC4-203ENST00000447216 UNC5BQ8IZJ1 945 aa17.92■□□□□ 0.46
TRAPPC4-203ENST00000447216 TP53I13Q8NBR0 393 aaPredicted RBP17.92■□□□□ 0.46
TRAPPC4-203ENST00000447216 PLA2G15Q8NCC3 412 aa17.92■□□□□ 0.46
TRAPPC4-203ENST00000447216 ZBTB44Q8NCP5 570 aa17.92■□□□□ 0.46
TRAPPC4-203ENST00000447216 CADM4Q8NFZ8 388 aa17.92■□□□□ 0.46
TRAPPC4-203ENST00000447216 AP2M1Q96CW1 435 aa17.92■□□□□ 0.46
TRAPPC4-203ENST00000447216 CDKN2AIPNLQ96HQ2 116 aa17.92■□□□□ 0.46
TRAPPC4-203ENST00000447216 PCED1AQ9H1Q7 454 aa17.92■□□□□ 0.46
TRAPPC4-203ENST00000447216 IL26Q9NPH9 171 aa17.92■□□□□ 0.46
TRAPPC4-203ENST00000447216 RAB21Q9UL25 225 aa17.92■□□□□ 0.46
TRAPPC4-203ENST00000447216 SLCO1B1Q9Y6L6 691 aa17.92■□□□□ 0.46
TRAPPC4-203ENST00000447216 PIKFYVEQ9Y2I7 2098 aa17.92■□□□□ 0.46
TRAPPC4-203ENST00000447216 WDFY4Q6ZS81 3184 aa17.91■□□□□ 0.46
TRAPPC4-203ENST00000447216 ZCWPW2A0A1B0GU75 182 aa17.91■□□□□ 0.46
TRAPPC4-203ENST00000447216 RGSL1A5PLK6 1076 aa17.91■□□□□ 0.46
TRAPPC4-203ENST00000447216 K7ESM1 405 aa17.91■□□□□ 0.46
TRAPPC4-203ENST00000447216 CTIFO43310 598 aaKnown RBP17.91■□□□□ 0.46
TRAPPC4-203ENST00000447216 USP1O94782 785 aa17.91■□□□□ 0.46
TRAPPC4-203ENST00000447216 POLBP06746 335 aa17.91■□□□□ 0.46
TRAPPC4-203ENST00000447216 PRSS56P0CW18 603 aa17.91■□□□□ 0.46
TRAPPC4-203ENST00000447216 MAOBP27338 520 aa17.91■□□□□ 0.46
TRAPPC4-203ENST00000447216 MC4RP32245 332 aa17.91■□□□□ 0.46
TRAPPC4-203ENST00000447216 CA5AP35218 305 aa17.91■□□□□ 0.46
TRAPPC4-203ENST00000447216 IGFALSP35858 605 aa17.91■□□□□ 0.46
TRAPPC4-203ENST00000447216 HADHAP40939 763 aa17.91■□□□□ 0.46
TRAPPC4-203ENST00000447216 DCDC1P59894 354 aa17.91■□□□□ 0.46
TRAPPC4-203ENST00000447216 PEX6Q13608 980 aa17.91■□□□□ 0.46
TRAPPC4-203ENST00000447216 CRYMQ14894 314 aa17.91■□□□□ 0.46
TRAPPC4-203ENST00000447216 LRRC14Q15048 493 aa17.91■□□□□ 0.46
TRAPPC4-203ENST00000447216 AGERQ15109 404 aa17.91■□□□□ 0.46
TRAPPC4-203ENST00000447216 SETMARQ53H47 684 aaPredicted RBP17.91■□□□□ 0.46
TRAPPC4-203ENST00000447216 STEAP4Q687X5 459 aa17.91■□□□□ 0.46
TRAPPC4-203ENST00000447216 ZNF765Q7L2R6 523 aa17.91■□□□□ 0.46
TRAPPC4-203ENST00000447216 LPCAT2Q7L5N7 544 aa17.91■□□□□ 0.46
TRAPPC4-203ENST00000447216 PALM2Q8IXS6 379 aa17.91■□□□□ 0.46
TRAPPC4-203ENST00000447216 OR6P1Q8NGX9 317 aa17.91■□□□□ 0.46
TRAPPC4-203ENST00000447216 ASB12Q8WXK4 309 aa17.91■□□□□ 0.46
TRAPPC4-203ENST00000447216 KLF6Q99612 283 aaPredicted RBP17.91■□□□□ 0.46
TRAPPC4-203ENST00000447216 NAT9Q9BTE0 207 aa17.91■□□□□ 0.46
TRAPPC4-203ENST00000447216 SPATA16Q9BXB7 569 aa17.91■□□□□ 0.46
TRAPPC4-203ENST00000447216 TSPYL1Q9H0U9 437 aa17.91■□□□□ 0.46
TRAPPC4-203ENST00000447216 DUSP15Q9H1R2 295 aaPredicted RBP17.91■□□□□ 0.46
TRAPPC4-203ENST00000447216 CDC42EP4Q9H3Q1 356 aaKnown RBP17.91■□□□□ 0.46
TRAPPC4-203ENST00000447216 FAM96AQ9H5X1 160 aa17.91■□□□□ 0.46
TRAPPC4-203ENST00000447216 RAD18Q9NS91 495 aa17.91■□□□□ 0.46
TRAPPC4-203ENST00000447216 NINJ2Q9NZG7 142 aa17.91■□□□□ 0.46
TRAPPC4-203ENST00000447216 R4GN57 208 aa17.91■□□□□ 0.46
TRAPPC4-203ENST00000447216 CACNA1HO95180 2353 aa17.91■□□□□ 0.46
TRAPPC4-203ENST00000447216 KNL1Q8NG31 2342 aa17.9■□□□□ 0.46
TRAPPC4-203ENST00000447216 GLYATL1P3A0A0U1RQE8 302 aa17.9■□□□□ 0.46
TRAPPC4-203ENST00000447216 GOLGA8KD6RF30 607 aa17.9■□□□□ 0.46
TRAPPC4-203ENST00000447216 GOLGA8TH3BQL2 631 aa17.9■□□□□ 0.46
TRAPPC4-203ENST00000447216 UGT1A9O60656 530 aa17.9■□□□□ 0.46
TRAPPC4-203ENST00000447216 VAPBO95292 243 aa17.9■□□□□ 0.46
TRAPPC4-203ENST00000447216 GOT2P00505 430 aaKnown RBP17.9■□□□□ 0.46
TRAPPC4-203ENST00000447216 UGT1A6P19224 532 aa17.9■□□□□ 0.46
TRAPPC4-203ENST00000447216 UGT1A1P22309 533 aa17.9■□□□□ 0.46
TRAPPC4-203ENST00000447216 UGT1A4P22310 534 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms