RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	PAFAH1B3	Q15102	231 aa	Known RBP	12.52	□□□□□ -0.41
DDR1-238	ENST00000446312	PYCR3	Q53H96	274 aa		12.52	□□□□□ -0.41
DDR1-238	ENST00000446312	KCTD11	Q693B1	232 aa		12.52	□□□□□ -0.41
DDR1-238	ENST00000446312	KCTD8	Q6ZWB6	473 aa		12.52	□□□□□ -0.41
DDR1-238	ENST00000446312	BTLA	Q7Z6A9	289 aa		12.52	□□□□□ -0.41
DDR1-238	ENST00000446312	MYLPF	Q96A32	169 aa		12.52	□□□□□ -0.41
DDR1-238	ENST00000446312	C19orf60	Q96EN9	201 aa		12.52	□□□□□ -0.41
DDR1-238	ENST00000446312	EFHD1	Q9BUP0	239 aa		12.52	□□□□□ -0.41
DDR1-238	ENST00000446312	ING2	Q9H160	280 aa		12.52	□□□□□ -0.41
DDR1-238	ENST00000446312	RETREG1	Q9H6L5	497 aa		12.52	□□□□□ -0.41
DDR1-238	ENST00000446312	ZNF696	Q9H7X3	374 aa		12.52	□□□□□ -0.41
DDR1-238	ENST00000446312	CLK4	Q9HAZ1	481 aa	Known RBP	12.52	□□□□□ -0.41
DDR1-238	ENST00000446312	GLOD4	Q9HC38	313 aa		12.52	□□□□□ -0.41
DDR1-238	ENST00000446312	IGSF5	Q9NSI5	407 aa		12.52	□□□□□ -0.41
DDR1-238	ENST00000446312	INTS7	Q9NVH2	962 aa	Known RBP	12.52	□□□□□ -0.41
DDR1-238	ENST00000446312	ABI2	Q9NYB9	513 aa	Predicted RBP	12.52	□□□□□ -0.41
DDR1-238	ENST00000446312	ADAM28	Q9UKQ2	775 aa		12.52	□□□□□ -0.41
DDR1-238	ENST00000446312	ST14	Q9Y5Y6	855 aa		12.52	□□□□□ -0.41
DDR1-238	ENST00000446312	RAD54B	Q9Y620	910 aa		12.52	□□□□□ -0.41
DDR1-238	ENST00000446312	HAPLN1	P10915	354 aa	Predicted RBP	12.52	□□□□□ -0.41
DDR1-238	ENST00000446312	UGT1A1	P22309	533 aa		12.52	□□□□□ -0.41
DDR1-238	ENST00000446312	UGT1A4	P22310	534 aa		12.52	□□□□□ -0.41
DDR1-238	ENST00000446312	TCEA1	P23193	301 aa	Known RBP	12.52	□□□□□ -0.41
DDR1-238	ENST00000446312	UGT1A3	P35503	534 aa		12.52	□□□□□ -0.41
DDR1-238	ENST00000446312	UGT1A5	P35504	534 aa		12.52	□□□□□ -0.41
DDR1-238	ENST00000446312	GRIK1	P39086	918 aa		12.52	□□□□□ -0.41
DDR1-238	ENST00000446312	CDKN1C	P49918	316 aa	Predicted RBP	12.52	□□□□□ -0.41
DDR1-238	ENST00000446312	DGKQ	P52824	942 aa		12.52	□□□□□ -0.41
DDR1-238	ENST00000446312	DEPDC1	Q5TB30	811 aa		12.52	□□□□□ -0.41
DDR1-238	ENST00000446312	STK32C	Q86UX6	486 aa		12.52	□□□□□ -0.41
DDR1-238	ENST00000446312	TICAM1	Q8IUC6	712 aa		12.52	□□□□□ -0.41
DDR1-238	ENST00000446312	CLEC4F	Q8N1N0	589 aa		12.52	□□□□□ -0.41
DDR1-238	ENST00000446312	BBS5	Q8N3I7	341 aa		12.52	□□□□□ -0.41
DDR1-238	ENST00000446312	CATSPER1	Q8NEC5	780 aa		12.52	□□□□□ -0.41
DDR1-238	ENST00000446312	CLHC1	Q8NHS4	586 aa		12.52	□□□□□ -0.41
DDR1-238	ENST00000446312	ELMO1	Q92556	727 aa		12.52	□□□□□ -0.41
DDR1-238	ENST00000446312	GPATCH1	Q9BRR8	931 aa	Known RBP	12.52	□□□□□ -0.41
DDR1-238	ENST00000446312	MIR1-1HG	Q9H1L0	117 aa		12.52	□□□□□ -0.41
DDR1-238	ENST00000446312	IPO11	Q9UI26	975 aa	Known RBP	12.52	□□□□□ -0.41
DDR1-238	ENST00000446312	UTS2R	Q9UKP6	389 aa		12.52	□□□□□ -0.41
DDR1-238	ENST00000446312	TRIP12	Q14669	1992 aa	Predicted RBP	12.51	□□□□□ -0.41
DDR1-238	ENST00000446312	IQCF5	A8MTL0	148 aa		12.51	□□□□□ -0.41
DDR1-238	ENST00000446312	NPY2R	P49146	381 aa		12.51	□□□□□ -0.41
DDR1-238	ENST00000446312	XIAP	P98170	497 aa		12.51	□□□□□ -0.41
DDR1-238	ENST00000446312	APOF	Q13790	326 aa		12.51	□□□□□ -0.41
DDR1-238	ENST00000446312	DDR2	Q16832	855 aa		12.51	□□□□□ -0.41
DDR1-238	ENST00000446312	FAM209A	Q5JX71	171 aa		12.51	□□□□□ -0.41
DDR1-238	ENST00000446312	GALNT18	Q6P9A2	607 aa		12.51	□□□□□ -0.41
DDR1-238	ENST00000446312	NEK10	Q6ZWH5	1172 aa		12.51	□□□□□ -0.41
DDR1-238	ENST00000446312	UNC93A	Q86WB7	457 aa		12.51	□□□□□ -0.41
DDR1-238	ENST00000446312	ZDHHC17	Q8IUH5	632 aa		12.51	□□□□□ -0.41
DDR1-238	ENST00000446312	CROCCP3	Q8IVE0	287 aa		12.51	□□□□□ -0.41
DDR1-238	ENST00000446312	CRYBG2	Q8N1P7	616 aa		12.51	□□□□□ -0.41
DDR1-238	ENST00000446312	EFHB	Q8N7U6	833 aa		12.51	□□□□□ -0.41
DDR1-238	ENST00000446312	SPON2	Q9BUD6	331 aa		12.51	□□□□□ -0.41
DDR1-238	ENST00000446312	FANCE	Q9HB96	536 aa		12.51	□□□□□ -0.41
DDR1-238	ENST00000446312	POLE4	Q9NR33	117 aa		12.51	□□□□□ -0.41
DDR1-238	ENST00000446312	CMTM6	Q9NX76	183 aa		12.51	□□□□□ -0.41
DDR1-238	ENST00000446312	PARP14	Q460N5	1801 aa		12.51	□□□□□ -0.41
DDR1-238	ENST00000446312	SH3PXD2B	A1X283	911 aa		12.51	□□□□□ -0.41
DDR1-238	ENST00000446312	RSL1D1	O76021	490 aa	Known RBP	12.51	□□□□□ -0.41
DDR1-238	ENST00000446312	ITGB1	P05556	798 aa		12.51	□□□□□ -0.41
DDR1-238	ENST00000446312	POLR2I	P36954	125 aa	Known RBP	12.51	□□□□□ -0.41
DDR1-238	ENST00000446312	HADHA	P40939	763 aa		12.51	□□□□□ -0.41
DDR1-238	ENST00000446312	UFM1	P61960	85 aa		12.51	□□□□□ -0.41
DDR1-238	ENST00000446312	SNX17	Q15036	470 aa		12.51	□□□□□ -0.41
DDR1-238	ENST00000446312	WDR45B	Q5MNZ6	344 aa		12.51	□□□□□ -0.41
DDR1-238	ENST00000446312	STXBP5	Q5T5C0	1151 aa		12.51	□□□□□ -0.41
DDR1-238	ENST00000446312	VASH1	Q7L8A9	365 aa	Predicted RBP	12.51	□□□□□ -0.41
DDR1-238	ENST00000446312	UBE2Q1	Q7Z7E8	422 aa		12.51	□□□□□ -0.41
DDR1-238	ENST00000446312	CDYL2	Q8N8U2	506 aa		12.51	□□□□□ -0.41
DDR1-238	ENST00000446312	DDI1	Q8WTU0	396 aa		12.51	□□□□□ -0.41
DDR1-238	ENST00000446312	ZNF560	Q96MR9	790 aa		12.51	□□□□□ -0.41
DDR1-238	ENST00000446312	MRPL57	Q9BQC6	102 aa	Known RBP	12.51	□□□□□ -0.41
DDR1-238	ENST00000446312	SMURF2	Q9HAU4	748 aa		12.51	□□□□□ -0.41
DDR1-238	ENST00000446312	PLGRKT	Q9HBL7	147 aa		12.51	□□□□□ -0.41
DDR1-238	ENST00000446312	PNPLA3	Q9NST1	481 aa		12.51	□□□□□ -0.41
DDR1-238	ENST00000446312	MAP10	Q9P2G4	905 aa		12.51	□□□□□ -0.41
DDR1-238	ENST00000446312	ZMYM5	Q9UJ78	669 aa		12.51	□□□□□ -0.41
DDR1-238	ENST00000446312	INVS	Q9Y283	1065 aa		12.51	□□□□□ -0.41
DDR1-238	ENST00000446312	DNAJC15	Q9Y5T4	150 aa		12.51	□□□□□ -0.41
DDR1-238	ENST00000446312	ANK1	P16157	1881 aa		12.51	□□□□□ -0.41
DDR1-238	ENST00000446312	PIR	O00625	290 aa		12.5	□□□□□ -0.41
DDR1-238	ENST00000446312	PTGES	O14684	152 aa		12.5	□□□□□ -0.41
DDR1-238	ENST00000446312	SH3BGRL	O75368	114 aa		12.5	□□□□□ -0.41
DDR1-238	ENST00000446312	CYP4B1	P13584	511 aa		12.5	□□□□□ -0.41
DDR1-238	ENST00000446312	PRDX6	P30041	224 aa		12.5	□□□□□ -0.41
DDR1-238	ENST00000446312	DGCR6	Q14129	220 aa		12.5	□□□□□ -0.41
DDR1-238	ENST00000446312	RBBP7	Q16576	425 aa		12.5	□□□□□ -0.41
DDR1-238	ENST00000446312	PAGE3	Q5JUK9	113 aa		12.5	□□□□□ -0.41
DDR1-238	ENST00000446312	DENND5A	Q6IQ26	1287 aa		12.5	□□□□□ -0.41
DDR1-238	ENST00000446312		Q6ZNX1	250 aa		12.5	□□□□□ -0.41
DDR1-238	ENST00000446312	BPHL	Q86WA6	291 aa	Predicted RBP	12.5	□□□□□ -0.41
DDR1-238	ENST00000446312	OR2T34	Q8NGX1	318 aa		12.5	□□□□□ -0.41
DDR1-238	ENST00000446312	OR2T3	Q8NH03	318 aa		12.5	□□□□□ -0.41
DDR1-238	ENST00000446312	IRGQ	Q8WZA9	623 aa		12.5	□□□□□ -0.41
DDR1-238	ENST00000446312	PSMG2	Q969U7	264 aa		12.5	□□□□□ -0.41
DDR1-238	ENST00000446312	SDCCAG3	Q96C92	435 aa		12.5	□□□□□ -0.41
DDR1-238	ENST00000446312	EIF2B3	Q9NR50	452 aa	Known RBP	12.5	□□□□□ -0.41
DDR1-238	ENST00000446312	UXT	Q9UBK9	157 aa	Predicted RBP	12.5	□□□□□ -0.41

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