RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 OGFOD2Q6N063 350 aa18.61■□□□□ 0.57
SHANK3-203ENST00000445220 CATSPERGQ6ZRH7 1159 aa18.61■□□□□ 0.57
SHANK3-203ENST00000445220 ZNF572Q7Z3I7 529 aaPredicted RBP18.61■□□□□ 0.57
SHANK3-203ENST00000445220 TRIM48Q8IWZ4 208 aa18.61■□□□□ 0.57
SHANK3-203ENST00000445220 TULP3O75386 442 aa18.61■□□□□ 0.57
SHANK3-203ENST00000445220 METTL18O95568 372 aa18.61■□□□□ 0.57
SHANK3-203ENST00000445220 POU5F1Q01860 360 aaKnown RBP18.61■□□□□ 0.57
SHANK3-203ENST00000445220 KCNA10Q16322 511 aa18.61■□□□□ 0.57
SHANK3-203ENST00000445220 BMT2Q1RMZ1 405 aa18.61■□□□□ 0.57
SHANK3-203ENST00000445220 AHSA2Q719I0 299 aa18.61■□□□□ 0.57
SHANK3-203ENST00000445220 SPATA6LQ8N4H0 392 aa18.61■□□□□ 0.57
SHANK3-203ENST00000445220 ATP13A1Q9HD20 1204 aa18.61■□□□□ 0.57
SHANK3-203ENST00000445220 TMEM150BA6NC51 233 aa18.6■□□□□ 0.57
SHANK3-203ENST00000445220 FGF10O15520 208 aaPredicted RBP18.6■□□□□ 0.57
SHANK3-203ENST00000445220 PSEN2P49810 448 aa18.6■□□□□ 0.57
SHANK3-203ENST00000445220 GALNT3Q14435 633 aa18.6■□□□□ 0.57
SHANK3-203ENST00000445220 SUZ12Q15022 739 aaKnown RBP18.6■□□□□ 0.57
SHANK3-203ENST00000445220 ITIH5Q86UX2 942 aa18.6■□□□□ 0.57
SHANK3-203ENST00000445220 VPS4AQ9UN37 437 aa18.6■□□□□ 0.57
SHANK3-203ENST00000445220 TNFSF13BQ9Y275 285 aa18.6■□□□□ 0.57
SHANK3-203ENST00000445220 MYPNQ86TC9 1320 aa18.6■□□□□ 0.57
SHANK3-203ENST00000445220 CYP2C18P33260 490 aa18.6■□□□□ 0.57
SHANK3-203ENST00000445220 TSC22D1Q15714 1073 aa18.6■□□□□ 0.57
SHANK3-203ENST00000445220 UBR7Q8N806 425 aa18.6■□□□□ 0.57
SHANK3-203ENST00000445220 TEX47Q8TBZ9 253 aa18.6■□□□□ 0.57
SHANK3-203ENST00000445220 ERLEC1Q96DZ1 483 aa18.6■□□□□ 0.57
SHANK3-203ENST00000445220 ZBTB45Q96K62 511 aaPredicted RBP18.6■□□□□ 0.57
SHANK3-203ENST00000445220 C12orf65Q9H3J6 166 aaKnown RBP18.6■□□□□ 0.57
SHANK3-203ENST00000445220 CD320Q9NPF0 282 aa18.6■□□□□ 0.57
SHANK3-203ENST00000445220 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.6■□□□□ 0.571e-6■■■□□ 15.7
SHANK3-203ENST00000445220 PDP1Q9P0J1 537 aaPredicted RBP18.6■□□□□ 0.57
SHANK3-203ENST00000445220 SLC7A8Q9UHI5 535 aa18.6■□□□□ 0.57
SHANK3-203ENST00000445220 SH3BGRLO75368 114 aa18.6■□□□□ 0.57
SHANK3-203ENST00000445220 ZNF438Q7Z4V0 828 aa18.6■□□□□ 0.57
SHANK3-203ENST00000445220 DISP2A7MBM2 1401 aa18.6■□□□□ 0.57
SHANK3-203ENST00000445220 DHX15O43143 795 aaKnown RBP18.6■□□□□ 0.57
SHANK3-203ENST00000445220 SGTAO43765 313 aa18.6■□□□□ 0.57
SHANK3-203ENST00000445220 PGRP06401 933 aa18.6■□□□□ 0.57
SHANK3-203ENST00000445220 CTBP1Q13363 440 aa18.6■□□□□ 0.57
SHANK3-203ENST00000445220 VWA5B1Q5TIE3 1220 aa18.6■□□□□ 0.57
SHANK3-203ENST00000445220 REP15Q6BDI9 236 aa18.6■□□□□ 0.57
SHANK3-203ENST00000445220 FAM183BPQ6ZVS7 135 aa18.6■□□□□ 0.57
SHANK3-203ENST00000445220 ZNF655Q8N720 491 aaPredicted RBP18.6■□□□□ 0.57
SHANK3-203ENST00000445220 RNASE11Q8TAA1 199 aaKnown RBP18.6■□□□□ 0.57
SHANK3-203ENST00000445220 LRRC42Q9Y546 428 aa18.6■□□□□ 0.57
SHANK3-203ENST00000445220 TRPV2Q9Y5S1 764 aa18.6■□□□□ 0.57
SHANK3-203ENST00000445220 ZNF99A8MXY4 864 aaPredicted RBP18.59■□□□□ 0.57
SHANK3-203ENST00000445220 DNAJA2O60884 412 aa18.59■□□□□ 0.57
SHANK3-203ENST00000445220 LGALS2P05162 132 aa18.59■□□□□ 0.57
SHANK3-203ENST00000445220 CDH13P55290 713 aa18.59■□□□□ 0.57
SHANK3-203ENST00000445220 ARF5P84085 180 aa18.59■□□□□ 0.57
SHANK3-203ENST00000445220 LIPEQ05469 1076 aa18.59■□□□□ 0.57
SHANK3-203ENST00000445220 NKX1-2Q9UD57 310 aaPredicted RBP18.59■□□□□ 0.57
SHANK3-203ENST00000445220 CCRL2O00421 344 aa18.59■□□□□ 0.57
SHANK3-203ENST00000445220 TOR1BO14657 336 aa18.59■□□□□ 0.57
SHANK3-203ENST00000445220 OR6A2O95222 327 aa18.59■□□□□ 0.57
SHANK3-203ENST00000445220 NCCRP1Q6ZVX7 275 aaPredicted RBP18.59■□□□□ 0.57
SHANK3-203ENST00000445220 ADAMTSL2Q86TH1 951 aa18.59■□□□□ 0.57
SHANK3-203ENST00000445220 NKD2Q969F2 451 aaPredicted RBP18.59■□□□□ 0.57
SHANK3-203ENST00000445220 MAGEB10Q96LZ2 347 aaPredicted RBP18.59■□□□□ 0.57
SHANK3-203ENST00000445220 WDR18Q9BV38 432 aa18.59■□□□□ 0.57
SHANK3-203ENST00000445220 OR12D3Q9UGF7 316 aa18.59■□□□□ 0.57
SHANK3-203ENST00000445220 SLIT3O75094 1523 aa18.59■□□□□ 0.57
SHANK3-203ENST00000445220 RBM20Q5T481 1227 aaKnown RBP18.59■□□□□ 0.57
SHANK3-203ENST00000445220 COMMD2Q86X83 199 aa18.59■□□□□ 0.57
SHANK3-203ENST00000445220 ZZZ3Q8IYH5 903 aa18.59■□□□□ 0.57
SHANK3-203ENST00000445220 SVOPLQ8N434 492 aa18.59■□□□□ 0.57
SHANK3-203ENST00000445220 TMEM161BQ8NDZ6 487 aa18.59■□□□□ 0.57
SHANK3-203ENST00000445220 OR52K2Q8NGK3 314 aa18.59■□□□□ 0.57
SHANK3-203ENST00000445220 ROPN1LQ96C74 230 aa18.59■□□□□ 0.57
SHANK3-203ENST00000445220 EHD1Q9H4M9 534 aa18.59■□□□□ 0.57
SHANK3-203ENST00000445220 MAGEE1Q9HCI5 957 aa18.59■□□□□ 0.57
SHANK3-203ENST00000445220 SALL4Q9UJQ4 1053 aa18.59■□□□□ 0.57
SHANK3-203ENST00000445220 C3P01024 1663 aa18.59■□□□□ 0.57
SHANK3-203ENST00000445220 SLC22A1O15245 554 aa18.59■□□□□ 0.57
SHANK3-203ENST00000445220 FAM155BO75949 473 aa18.59■□□□□ 0.57
SHANK3-203ENST00000445220 ITIH1P19827 911 aa18.59■□□□□ 0.57
SHANK3-203ENST00000445220 FOXN2P32314 431 aa18.59■□□□□ 0.57
SHANK3-203ENST00000445220 CYP2A13Q16696 494 aa18.59■□□□□ 0.57
SHANK3-203ENST00000445220 TRIM40Q6P9F5 258 aa18.59■□□□□ 0.57
SHANK3-203ENST00000445220 OR8H3Q8N146 312 aa18.59■□□□□ 0.57
SHANK3-203ENST00000445220 POMGNT2Q8NAT1 580 aa18.59■□□□□ 0.57
SHANK3-203ENST00000445220 HSPBAP1Q96EW2 488 aa18.59■□□□□ 0.57
SHANK3-203ENST00000445220 DHRS7Q9Y394 339 aa18.59■□□□□ 0.57
SHANK3-203ENST00000445220 RLN1P04808 185 aa18.58■□□□□ 0.57
SHANK3-203ENST00000445220 TPSB2P20231 275 aa18.58■□□□□ 0.57
SHANK3-203ENST00000445220 SCRN3Q0VDG4 424 aa18.58■□□□□ 0.57
SHANK3-203ENST00000445220 TPSAB1Q15661 275 aa18.58■□□□□ 0.57
SHANK3-203ENST00000445220 CELF3Q5SZQ8 465 aaKnown RBP18.58■□□□□ 0.57
SHANK3-203ENST00000445220 TRMT11Q7Z4G4 463 aaKnown RBP18.58■□□□□ 0.57
SHANK3-203ENST00000445220 TRAPPC12Q8WVT3 735 aa18.58■□□□□ 0.57
SHANK3-203ENST00000445220 CPT1BQ92523 772 aa18.58■□□□□ 0.57
SHANK3-203ENST00000445220 DPP7Q9UHL4 492 aa18.58■□□□□ 0.57
SHANK3-203ENST00000445220 ZNF232Q9UNY5 417 aa18.58■□□□□ 0.57
SHANK3-203ENST00000445220 ENTPD4Q9Y227 616 aa18.58■□□□□ 0.57
SHANK3-203ENST00000445220 A0A0G2JPF8 293 aa18.58■□□□□ 0.57
SHANK3-203ENST00000445220 HNRNPCL3B7ZW38 293 aa18.58■□□□□ 0.57
SHANK3-203ENST00000445220 UGT2B4P06133 528 aa18.58■□□□□ 0.57
SHANK3-203ENST00000445220 HNRNPCL4P0DMR1 293 aa18.58■□□□□ 0.57
SHANK3-203ENST00000445220 NTSP30990 170 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms