RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 SLC14A1Q13336 389 aa14.05□□□□□ -0.16
SSBP3-208ENST00000444533 NFATC4Q14934 902 aa14.05□□□□□ -0.16
SSBP3-208ENST00000444533 WHAMMP3Q1A5X7 153 aa14.05□□□□□ -0.16
SSBP3-208ENST00000444533 STPG1Q5TH74 334 aa14.05□□□□□ -0.16
SSBP3-208ENST00000444533 ALS2CLQ60I27 953 aa14.05□□□□□ -0.16
SSBP3-208ENST00000444533 PDPK2PQ6A1A2 396 aa14.05□□□□□ -0.16
SSBP3-208ENST00000444533 ENPP7Q6UWV6 458 aa14.05□□□□□ -0.16
SSBP3-208ENST00000444533 MACC1Q6ZN28 852 aa14.05□□□□□ -0.16
SSBP3-208ENST00000444533 PRUNE1Q86TP1 453 aa14.05□□□□□ -0.16
SSBP3-208ENST00000444533 HEATR4Q86WZ0 1026 aa14.05□□□□□ -0.16
SSBP3-208ENST00000444533 CBARPQ8N350 705 aaPredicted RBP14.05□□□□□ -0.16
SSBP3-208ENST00000444533 GLIS1Q8NBF1 620 aa14.05□□□□□ -0.16
SSBP3-208ENST00000444533 SLCO2A1Q92959 643 aa14.05□□□□□ -0.16
SSBP3-208ENST00000444533 WDR92Q96MX6 357 aa14.05□□□□□ -0.16
SSBP3-208ENST00000444533 PLEKHG4BQ96PX9 1271 aa14.05□□□□□ -0.16
SSBP3-208ENST00000444533 SMIM14Q96QK8 99 aa14.05□□□□□ -0.16
SSBP3-208ENST00000444533 RIOK2Q9BVS4 552 aaKnown RBP14.05□□□□□ -0.16
SSBP3-208ENST00000444533 SLC13A1Q9BZW2 595 aa14.05□□□□□ -0.16
SSBP3-208ENST00000444533 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.05□□□□□ -0.16
SSBP3-208ENST00000444533 BFARQ9NZS9 450 aa14.05□□□□□ -0.16
SSBP3-208ENST00000444533 KLQ9UEF7 1012 aa14.05□□□□□ -0.16
SSBP3-208ENST00000444533 MOSPD1Q9UJG1 213 aa14.05□□□□□ -0.16
SSBP3-208ENST00000444533 CDC23Q9UJX2 597 aa14.05□□□□□ -0.16
SSBP3-208ENST00000444533 APPL1Q9UKG1 709 aa14.05□□□□□ -0.16
SSBP3-208ENST00000444533 FNDC3AQ9Y2H6 1198 aaKnown RBP14.05□□□□□ -0.16
SSBP3-208ENST00000444533 PLXNA2O75051 1894 aa14.05□□□□□ -0.16
SSBP3-208ENST00000444533 PI4KAP42356 2102 aa14.05□□□□□ -0.16
SSBP3-208ENST00000444533 MYO15AQ9UKN7 3530 aa14.04□□□□□ -0.16
SSBP3-208ENST00000444533 A0A0U1RQS6 177 aa14.04□□□□□ -0.16
SSBP3-208ENST00000444533 HEATR9A2RTY3 570 aa14.04□□□□□ -0.16
SSBP3-208ENST00000444533 NEMP2A6NFY4 417 aa14.04□□□□□ -0.16
SSBP3-208ENST00000444533 C4orf47A7E2U8 309 aa14.04□□□□□ -0.16
SSBP3-208ENST00000444533 ZNF883P0CG24 379 aa14.04□□□□□ -0.16
SSBP3-208ENST00000444533 MYCLP1P12525 358 aaPredicted RBP14.04□□□□□ -0.16
SSBP3-208ENST00000444533 CTSEP14091 401 aa14.04□□□□□ -0.16
SSBP3-208ENST00000444533 TPSB2P20231 275 aa14.04□□□□□ -0.16
SSBP3-208ENST00000444533 TRIM23P36406 574 aa14.04□□□□□ -0.16
SSBP3-208ENST00000444533 TERF1P54274 439 aa14.04□□□□□ -0.16
SSBP3-208ENST00000444533 KIAA1024LP59773 190 aa14.04□□□□□ -0.16
SSBP3-208ENST00000444533 PPARDQ03181 441 aa14.04□□□□□ -0.16
SSBP3-208ENST00000444533 ITGA9Q13797 1035 aa14.04□□□□□ -0.16
SSBP3-208ENST00000444533 POU6F1Q14863 301 aa14.04□□□□□ -0.16
SSBP3-208ENST00000444533 TPSAB1Q15661 275 aa14.04□□□□□ -0.16
SSBP3-208ENST00000444533 CDKN3Q16667 212 aa14.04□□□□□ -0.16
SSBP3-208ENST00000444533 SKIDA1Q1XH10 827 aa14.04□□□□□ -0.16
SSBP3-208ENST00000444533 ZNF423Q2M1K9 1284 aa14.04□□□□□ -0.16
SSBP3-208ENST00000444533 ADAMTSL4Q6UY14 1074 aa14.04□□□□□ -0.16
SSBP3-208ENST00000444533 NLRP9Q7RTR0 991 aa14.04□□□□□ -0.16
SSBP3-208ENST00000444533 PLA2G15Q8NCC3 412 aa14.04□□□□□ -0.16
SSBP3-208ENST00000444533 SPATA4Q8NEY3 305 aa14.04□□□□□ -0.16
SSBP3-208ENST00000444533 PPHLN1Q8NEY8 458 aaKnown RBP14.04□□□□□ -0.16
SSBP3-208ENST00000444533 OR56A4Q8NGH8 313 aa14.04□□□□□ -0.16
SSBP3-208ENST00000444533 OR52K1Q8NGK4 314 aa14.04□□□□□ -0.16
SSBP3-208ENST00000444533 SCAMP4Q969E2 229 aa14.04□□□□□ -0.16
SSBP3-208ENST00000444533 HIC2Q96JB3 615 aa14.04□□□□□ -0.16
SSBP3-208ENST00000444533 KRT12Q99456 494 aa14.04□□□□□ -0.16
SSBP3-208ENST00000444533 C19orf43Q9BQ61 176 aa14.04□□□□□ -0.16
SSBP3-208ENST00000444533 BPIFA1Q9NP55 256 aa14.04□□□□□ -0.16
SSBP3-208ENST00000444533 TM7SF3Q9NS93 570 aa14.04□□□□□ -0.16
SSBP3-208ENST00000444533 DNAAF2Q9NVR5 837 aaKnown RBP14.04□□□□□ -0.16
SSBP3-208ENST00000444533 SPO11Q9Y5K1 396 aa14.04□□□□□ -0.16
SSBP3-208ENST00000444533 ARL5AQ9Y689 179 aa14.04□□□□□ -0.16
SSBP3-208ENST00000444533 FAM186AA6NE01 2351 aa14.03□□□□□ -0.16
SSBP3-208ENST00000444533 EP300Q09472 2414 aaPredicted RBP14.03□□□□□ -0.16
SSBP3-208ENST00000444533 RIF1Q5UIP0 2472 aaKnown RBP14.03□□□□□ -0.16
SSBP3-208ENST00000444533 GLYATL1P3A0A0U1RQE8 302 aa14.03□□□□□ -0.16
SSBP3-208ENST00000444533 RASGRP1O95267 797 aa14.03□□□□□ -0.16
SSBP3-208ENST00000444533 ASMTLO95671 621 aa14.03□□□□□ -0.16
SSBP3-208ENST00000444533 TNFP01375 233 aa14.03□□□□□ -0.16
SSBP3-208ENST00000444533 ALPPL2P10696 532 aa14.03□□□□□ -0.16
SSBP3-208ENST00000444533 JUNDP17535 347 aa14.03□□□□□ -0.16
SSBP3-208ENST00000444533 TPH1P17752 444 aa14.03□□□□□ -0.16
SSBP3-208ENST00000444533 NPY2RP49146 381 aa14.03□□□□□ -0.16
SSBP3-208ENST00000444533 CDK3Q00526 305 aa14.03□□□□□ -0.16
SSBP3-208ENST00000444533 OLIG2Q13516 323 aa14.03□□□□□ -0.16
SSBP3-208ENST00000444533 PTK6Q13882 451 aa14.03□□□□□ -0.16
SSBP3-208ENST00000444533 DNTTIP2Q5QJE6 756 aaKnown RBP14.03□□□□□ -0.16
SSBP3-208ENST00000444533 HENMT1Q5T8I9 393 aaKnown RBP14.03□□□□□ -0.16
SSBP3-208ENST00000444533 PHYKPLQ8IUZ5 450 aa14.03□□□□□ -0.16
SSBP3-208ENST00000444533 PPIL6Q8IXY8 311 aa14.03□□□□□ -0.16
SSBP3-208ENST00000444533 TRAM1L1Q8N609 369 aa14.03□□□□□ -0.16
SSBP3-208ENST00000444533 BBOF1Q8ND07 529 aa14.03□□□□□ -0.16
SSBP3-208ENST00000444533 OR4K2Q8NGD2 314 aa14.03□□□□□ -0.16
SSBP3-208ENST00000444533 GDAP1Q8TB36 358 aa14.03□□□□□ -0.16
SSBP3-208ENST00000444533 STYXQ8WUJ0 223 aa14.03□□□□□ -0.16
SSBP3-208ENST00000444533 TTC25Q96NG3 672 aa14.03□□□□□ -0.16
SSBP3-208ENST00000444533 TEX101Q9BY14 249 aa14.03□□□□□ -0.16
SSBP3-208ENST00000444533 ZCCHC2Q9C0B9 1178 aaKnown RBP14.03□□□□□ -0.16
SSBP3-208ENST00000444533 IL22Q9GZX6 179 aa14.03□□□□□ -0.16
SSBP3-208ENST00000444533 SLC32A1Q9H598 525 aa14.03□□□□□ -0.16
SSBP3-208ENST00000444533 XAB2Q9HCS7 855 aaKnown RBP14.03□□□□□ -0.16
SSBP3-208ENST00000444533 IL17CQ9P0M4 197 aa14.03□□□□□ -0.16
SSBP3-208ENST00000444533 SAMD15Q9P1V8 674 aa14.03□□□□□ -0.16
SSBP3-208ENST00000444533 NFKBIL1Q9UBC1 381 aaPredicted RBP14.03□□□□□ -0.16
SSBP3-208ENST00000444533 DOLKQ9UPQ8 538 aa14.03□□□□□ -0.16
SSBP3-208ENST00000444533 PCDHGB2Q9Y5G2 931 aa14.03□□□□□ -0.16
SSBP3-208ENST00000444533 SLC30A1Q9Y6M5 507 aa14.03□□□□□ -0.16
SSBP3-208ENST00000444533 PTPRZ1P23471 2315 aaPredicted RBP14.03□□□□□ -0.16
SSBP3-208ENST00000444533 A0A1B0GTQ1 180 aa14.02□□□□□ -0.17
SSBP3-208ENST00000444533 FAM187AA6NFU0 413 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms