RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 CCDC66A2RUB6 948 aa13.99□□□□□ -0.17
TREX1-202ENST00000444177 CAPN8A6NHC0 703 aa13.99□□□□□ -0.17
TREX1-202ENST00000444177 PSMD11O00231 422 aa13.99□□□□□ -0.17
TREX1-202ENST00000444177 CACNB4O00305 520 aaPredicted RBP13.99□□□□□ -0.17
TREX1-202ENST00000444177 CASC3O15234 703 aaKnown RBP13.99□□□□□ -0.17
TREX1-202ENST00000444177 DXOO77932 396 aaKnown RBP13.99□□□□□ -0.17
TREX1-202ENST00000444177 TNFP01375 233 aa13.99□□□□□ -0.17
TREX1-202ENST00000444177 TRBC1P01850 177 aa13.99□□□□□ -0.17
TREX1-202ENST00000444177 MMP2P08253 660 aa13.99□□□□□ -0.17
TREX1-202ENST00000444177 CTNNA2P26232 953 aa13.99□□□□□ -0.17
TREX1-202ENST00000444177 ETV3P41162 512 aa13.99□□□□□ -0.17
TREX1-202ENST00000444177 SKOR1P84550 965 aa13.99□□□□□ -0.17
TREX1-202ENST00000444177 PRKD1Q15139 912 aaPredicted RBP13.99□□□□□ -0.17
TREX1-202ENST00000444177 TCEA2Q15560 299 aa13.99□□□□□ -0.17
TREX1-202ENST00000444177 PPP2R5EQ16537 467 aa13.99□□□□□ -0.17
TREX1-202ENST00000444177 LRRC66Q68CR7 880 aa13.99□□□□□ -0.17
TREX1-202ENST00000444177 KCTD16Q68DU8 428 aa13.99□□□□□ -0.17
TREX1-202ENST00000444177 RBM44Q6ZP01 1051 aaKnown RBP13.99□□□□□ -0.17
TREX1-202ENST00000444177 ZNF662Q6ZS27 426 aa13.99□□□□□ -0.17
TREX1-202ENST00000444177 HSD11B1LQ7Z5J1 315 aa13.99□□□□□ -0.17
TREX1-202ENST00000444177 ZC3H18Q86VM9 953 aaKnown RBP13.99□□□□□ -0.17
TREX1-202ENST00000444177 FUBP1Q96AE4 644 aaKnown RBP13.99□□□□□ -0.17
TREX1-202ENST00000444177 GRAMD1AQ96CP6 724 aa13.99□□□□□ -0.17
TREX1-202ENST00000444177 PDXPQ96GD0 296 aa13.99□□□□□ -0.17
TREX1-202ENST00000444177 ATXN7L3BQ96GX2 97 aa13.99□□□□□ -0.17
TREX1-202ENST00000444177 HIC2Q96JB3 615 aa13.99□□□□□ -0.17
TREX1-202ENST00000444177 WDR92Q96MX6 357 aa13.99□□□□□ -0.17
TREX1-202ENST00000444177 RBM15Q96T37 977 aaKnown RBP eCLIP13.99□□□□□ -0.17
TREX1-202ENST00000444177 HEMGNQ9BXL5 484 aa13.99□□□□□ -0.17
TREX1-202ENST00000444177 PCDHA3Q9Y5H8 950 aa13.99□□□□□ -0.17
TREX1-202ENST00000444177 ADGRG1Q9Y653 693 aa13.99□□□□□ -0.17
TREX1-202ENST00000444177 DGKBQ9Y6T7 804 aa13.99□□□□□ -0.17
TREX1-202ENST00000444177 MGAQ8IWI9 3026 aa13.98□□□□□ -0.17
TREX1-202ENST00000444177 A0A1W2PNU3 283 aaPredicted RBP13.98□□□□□ -0.17
TREX1-202ENST00000444177 TMEM202A6NGA9 273 aa13.98□□□□□ -0.17
TREX1-202ENST00000444177 TCEA3O75764 348 aa13.98□□□□□ -0.17
TREX1-202ENST00000444177 HOXC4P09017 264 aaPredicted RBP13.98□□□□□ -0.17
TREX1-202ENST00000444177 PTPN3P26045 913 aa13.98□□□□□ -0.17
TREX1-202ENST00000444177 TRIM23P36406 574 aa13.98□□□□□ -0.17
TREX1-202ENST00000444177 RWDD2BP57060 319 aa13.98□□□□□ -0.17
TREX1-202ENST00000444177 KIAA1024LP59773 190 aa13.98□□□□□ -0.17
TREX1-202ENST00000444177 TLE3Q04726 772 aa13.98□□□□□ -0.17
TREX1-202ENST00000444177 GALNT3Q14435 633 aa13.98□□□□□ -0.17
TREX1-202ENST00000444177 PCSK7Q16549 785 aa13.98□□□□□ -0.17
TREX1-202ENST00000444177 KIF26BQ2KJY2 2108 aa13.98□□□□□ -0.17
TREX1-202ENST00000444177 RAET1GQ6H3X3 334 aa13.98□□□□□ -0.17
TREX1-202ENST00000444177 BBS12Q6ZW61 710 aa13.98□□□□□ -0.17
TREX1-202ENST00000444177 NT5DC3Q86UY8 548 aa13.98□□□□□ -0.17
TREX1-202ENST00000444177 GKN2Q86XP6 184 aa13.98□□□□□ -0.17
TREX1-202ENST00000444177 PELI3Q8N2H9 469 aa13.98□□□□□ -0.17
TREX1-202ENST00000444177 ARL10Q8N8L6 244 aa13.98□□□□□ -0.17
TREX1-202ENST00000444177 LRRC57Q8N9N7 239 aa13.98□□□□□ -0.17
TREX1-202ENST00000444177 ZNF248Q8NDW4 579 aa13.98□□□□□ -0.17
TREX1-202ENST00000444177 WDR48Q8TAF3 677 aa13.98□□□□□ -0.17
TREX1-202ENST00000444177 UBE2Q2Q8WVN8 375 aa13.98□□□□□ -0.17
TREX1-202ENST00000444177 OR1E3Q8WZA6 343 aa13.98□□□□□ -0.17
TREX1-202ENST00000444177 QKIQ96PU8 341 aaKnown RBP eCLIP13.98□□□□□ -0.17
TREX1-202ENST00000444177 CCDC3Q9BQI4 270 aa13.98□□□□□ -0.17
TREX1-202ENST00000444177 TSGA10Q9BZW7 698 aa13.98□□□□□ -0.17
TREX1-202ENST00000444177 SIRPGQ9P1W8 387 aa13.98□□□□□ -0.17
TREX1-202ENST00000444177 CD84Q9UIB8 345 aa13.98□□□□□ -0.17
TREX1-202ENST00000444177 DNPEPQ9ULA0 475 aa13.98□□□□□ -0.17
TREX1-202ENST00000444177 GPR34Q9UPC5 381 aa13.98□□□□□ -0.17
TREX1-202ENST00000444177 PPIL1Q9Y3C6 166 aa13.98□□□□□ -0.17
TREX1-202ENST00000444177 ENTPD2Q9Y5L3 495 aa13.98□□□□□ -0.17
TREX1-202ENST00000444177 UNC13CQ8NB66 2214 aa13.98□□□□□ -0.17
TREX1-202ENST00000444177 AHCTF1Q8WYP5 2266 aa13.97□□□□□ -0.17
TREX1-202ENST00000444177 APOC4-APOC2K7ER74 178 aa13.97□□□□□ -0.17
TREX1-202ENST00000444177 FTCDO95954 541 aa13.97□□□□□ -0.17
TREX1-202ENST00000444177 APOC2P02655 101 aa13.97□□□□□ -0.17
TREX1-202ENST00000444177 CCDC175P0C221 793 aa13.97□□□□□ -0.17
TREX1-202ENST00000444177 ZNF30P17039 623 aa13.97□□□□□ -0.17
TREX1-202ENST00000444177 KELP23276 732 aa13.97□□□□□ -0.17
TREX1-202ENST00000444177 PCBP4P57723 403 aaKnown RBP13.97□□□□□ -0.17
TREX1-202ENST00000444177 ERVPABLB-1P60509 514 aa13.97□□□□□ -0.17
TREX1-202ENST00000444177 COPS2P61201 443 aa13.97□□□□□ -0.17
TREX1-202ENST00000444177 RPL26P61254 145 aaKnown RBP13.97□□□□□ -0.17
TREX1-202ENST00000444177 QPCTQ16769 361 aa13.97□□□□□ -0.17
TREX1-202ENST00000444177 C3orf38Q5JPI3 329 aa13.97□□□□□ -0.17
TREX1-202ENST00000444177 PNCKQ6P2M8 343 aa13.97□□□□□ -0.17
TREX1-202ENST00000444177 Q6ZVL8 140 aa13.97□□□□□ -0.17
TREX1-202ENST00000444177 PEX26Q7Z412 305 aa13.97□□□□□ -0.17
TREX1-202ENST00000444177 KDELC2Q7Z4H8 507 aa13.97□□□□□ -0.17
TREX1-202ENST00000444177 HEATR4Q86WZ0 1026 aa13.97□□□□□ -0.17
TREX1-202ENST00000444177 SPACA3Q8IXA5 215 aa13.97□□□□□ -0.17
TREX1-202ENST00000444177 SYCE1Q8N0S2 351 aa13.97□□□□□ -0.17
TREX1-202ENST00000444177 CBARPQ8N350 705 aaPredicted RBP13.97□□□□□ -0.17
TREX1-202ENST00000444177 RNF10Q8N5U6 811 aaKnown RBP13.97□□□□□ -0.17
TREX1-202ENST00000444177 KYQ8NBH2 561 aa13.97□□□□□ -0.17
TREX1-202ENST00000444177 OR56A4Q8NGH8 313 aa13.97□□□□□ -0.17
TREX1-202ENST00000444177 IMP4Q96G21 291 aaKnown RBP13.97□□□□□ -0.17
TREX1-202ENST00000444177 NAF1Q96HR8 494 aaKnown RBP13.97□□□□□ -0.17
TREX1-202ENST00000444177 SLC46A1Q96NT5 459 aa13.97□□□□□ -0.17
TREX1-202ENST00000444177 LGR4Q9BXB1 951 aa13.97□□□□□ -0.17
TREX1-202ENST00000444177 ADGRE3Q9BY15 652 aa13.97□□□□□ -0.17
TREX1-202ENST00000444177 OSBPL8Q9BZF1 889 aa13.97□□□□□ -0.17
TREX1-202ENST00000444177 SLC25A51Q9H1U9 297 aa13.97□□□□□ -0.17
TREX1-202ENST00000444177 GLOD4Q9HC38 313 aa13.97□□□□□ -0.17
TREX1-202ENST00000444177 FGF22Q9HCT0 170 aa13.97□□□□□ -0.17
TREX1-202ENST00000444177 ASCL3Q9NQ33 180 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms