RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 LHCGRP22888 699 aa14.33□□□□□ -0.12
HMGN1-208ENST00000443046 VIPR1P32241 457 aa14.33□□□□□ -0.12
HMGN1-208ENST00000443046 MAN1A1P33908 653 aa14.33□□□□□ -0.12
HMGN1-208ENST00000443046 UQCRFS1P47985 274 aa14.33□□□□□ -0.12
HMGN1-208ENST00000443046 SCNN1BP51168 640 aa14.33□□□□□ -0.12
HMGN1-208ENST00000443046 JAM2P57087 298 aa14.33□□□□□ -0.12
HMGN1-208ENST00000443046 TPI1P60174 286 aa14.33□□□□□ -0.12
HMGN1-208ENST00000443046 PYCR3Q53H96 274 aa14.33□□□□□ -0.12
HMGN1-208ENST00000443046 PPP1R15BQ5SWA1 713 aa14.33□□□□□ -0.12
HMGN1-208ENST00000443046 CAPRIN2Q6IMN6 1127 aaKnown RBP14.33□□□□□ -0.12
HMGN1-208ENST00000443046 ARHGAP36Q6ZRI8 547 aa14.33□□□□□ -0.12
HMGN1-208ENST00000443046 TECPR1Q7Z6L1 1165 aa14.33□□□□□ -0.12
HMGN1-208ENST00000443046 ZNF761Q86XN6 746 aaPredicted RBP14.33□□□□□ -0.12
HMGN1-208ENST00000443046 FAM114A1Q8IWE2 563 aa14.33□□□□□ -0.12
HMGN1-208ENST00000443046 OR10G6Q8NH81 332 aa14.33□□□□□ -0.12
HMGN1-208ENST00000443046 SLC37A2Q8TED4 501 aa14.33□□□□□ -0.12
HMGN1-208ENST00000443046 CINPQ9BW66 212 aaPredicted RBP14.33□□□□□ -0.12
HMGN1-208ENST00000443046 SIDT1Q9NXL6 827 aaKnown RBP14.33□□□□□ -0.12
HMGN1-208ENST00000443046 MRPS18BQ9Y676 258 aaKnown RBP14.33□□□□□ -0.12
HMGN1-208ENST00000443046 HIVEP3Q5T1R4 2406 aa14.32□□□□□ -0.12
HMGN1-208ENST00000443046 SHANK1Q9Y566 2161 aa14.32□□□□□ -0.12
HMGN1-208ENST00000443046 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.32□□□□□ -0.12
HMGN1-208ENST00000443046 A8MU76 341 aa14.32□□□□□ -0.12
HMGN1-208ENST00000443046 SOCS5O75159 536 aa14.32□□□□□ -0.12
HMGN1-208ENST00000443046 EML2O95834 649 aa14.32□□□□□ -0.12
HMGN1-208ENST00000443046 RPL7AP62424 266 aaKnown RBP14.32□□□□□ -0.12
HMGN1-208ENST00000443046 IL10RBQ08334 325 aa14.32□□□□□ -0.12
HMGN1-208ENST00000443046 C16orf46Q6P387 395 aa14.32□□□□□ -0.12
HMGN1-208ENST00000443046 Q6ZVL8 140 aa14.32□□□□□ -0.12
HMGN1-208ENST00000443046 CCDC13Q8IYE1 715 aa14.32□□□□□ -0.12
HMGN1-208ENST00000443046 ESX1Q8N693 406 aa14.32□□□□□ -0.12
HMGN1-208ENST00000443046 TEX19Q8NA77 164 aa14.32□□□□□ -0.12
HMGN1-208ENST00000443046 GALNT11Q8NCW6 608 aa14.32□□□□□ -0.12
HMGN1-208ENST00000443046 AHCYL2Q96HN2 611 aaKnown RBP14.32□□□□□ -0.12
HMGN1-208ENST00000443046 OR2M4Q96R27 311 aa14.32□□□□□ -0.12
HMGN1-208ENST00000443046 MCCC1Q96RQ3 725 aaPredicted RBP14.32□□□□□ -0.12
HMGN1-208ENST00000443046 SLC38A3Q99624 504 aa14.32□□□□□ -0.12
HMGN1-208ENST00000443046 CNPY3Q9BT09 278 aa14.32□□□□□ -0.12
HMGN1-208ENST00000443046 PRDM8Q9NQV8 689 aa14.32□□□□□ -0.12
HMGN1-208ENST00000443046 PCDHGC4Q9Y5F7 938 aa14.32□□□□□ -0.12
HMGN1-208ENST00000443046 ESPL1Q14674 2120 aa14.32□□□□□ -0.12
HMGN1-208ENST00000443046 ANKRD17O75179 2603 aaKnown RBP14.31□□□□□ -0.12
HMGN1-208ENST00000443046 TTC24A2A3L6 582 aaPredicted RBP14.31□□□□□ -0.12
HMGN1-208ENST00000443046 NPIPB15A6NHN6 443 aaPredicted RBP14.31□□□□□ -0.12
HMGN1-208ENST00000443046 MKRN2OSH3BPM6 223 aa14.31□□□□□ -0.12
HMGN1-208ENST00000443046 PEX11BO96011 259 aa14.31□□□□□ -0.12
HMGN1-208ENST00000443046 CALB1P05937 261 aa14.31□□□□□ -0.12
HMGN1-208ENST00000443046 FURINP09958 794 aa14.31□□□□□ -0.12
HMGN1-208ENST00000443046 SOX5P35711 763 aa14.31□□□□□ -0.12
HMGN1-208ENST00000443046 NSFP46459 744 aaKnown RBP14.31□□□□□ -0.12
HMGN1-208ENST00000443046 RENBPP51606 427 aa14.31□□□□□ -0.12
HMGN1-208ENST00000443046 SLC10A7Q0GE19 358 aa14.31□□□□□ -0.12
HMGN1-208ENST00000443046 LRP8Q14114 963 aa14.31□□□□□ -0.12
HMGN1-208ENST00000443046 CLEC16AQ2KHT3 1053 aa14.31□□□□□ -0.12
HMGN1-208ENST00000443046 SNAP47Q5SQN1 464 aa14.31□□□□□ -0.12
HMGN1-208ENST00000443046 RAET1GQ6H3X3 334 aa14.31□□□□□ -0.12
HMGN1-208ENST00000443046 ADAMTSL4Q6UY14 1074 aa14.31□□□□□ -0.12
HMGN1-208ENST00000443046 ASB18Q6ZVZ8 466 aa14.31□□□□□ -0.12
HMGN1-208ENST00000443046 MON1BQ7L1V2 547 aa14.31□□□□□ -0.12
HMGN1-208ENST00000443046 KDELC2Q7Z4H8 507 aa14.31□□□□□ -0.12
HMGN1-208ENST00000443046 NLRP8Q86W28 1048 aa14.31□□□□□ -0.12
HMGN1-208ENST00000443046 NPWQ8N729 165 aa14.31□□□□□ -0.12
HMGN1-208ENST00000443046 SCRN2Q96FV2 425 aa14.31□□□□□ -0.12
HMGN1-208ENST00000443046 SARS2Q9NP81 518 aaKnown RBP14.31□□□□□ -0.12
HMGN1-208ENST00000443046 TMEM98Q9Y2Y6 226 aa14.31□□□□□ -0.12
HMGN1-208ENST00000443046 PPIL1Q9Y3C6 166 aa14.31□□□□□ -0.12
HMGN1-208ENST00000443046 RPS6KL1Q9Y6S9 549 aa14.31□□□□□ -0.12
HMGN1-208ENST00000443046 TRBV23OR9-2A0A075B6M9 112 aa14.3□□□□□ -0.12
HMGN1-208ENST00000443046 A6NCN8 305 aa14.3□□□□□ -0.12
HMGN1-208ENST00000443046 EIF3CLB5ME19 914 aaKnown RBP14.3□□□□□ -0.12
HMGN1-208ENST00000443046 POLR1CO15160 346 aaPredicted RBP14.3□□□□□ -0.12
HMGN1-208ENST00000443046 AGFG2O95081 481 aa14.3□□□□□ -0.12
HMGN1-208ENST00000443046 MAP3K6O95382 1288 aa14.3□□□□□ -0.12
HMGN1-208ENST00000443046 RECKO95980 971 aa14.3□□□□□ -0.12
HMGN1-208ENST00000443046 PDGFAP04085 211 aa14.3□□□□□ -0.12
HMGN1-208ENST00000443046 ANKRD34CP0C6C1 535 aa14.3□□□□□ -0.12
HMGN1-208ENST00000443046 GNLYP22749 145 aa14.3□□□□□ -0.12
HMGN1-208ENST00000443046 EPHA4P54764 986 aa14.3□□□□□ -0.12
HMGN1-208ENST00000443046 OGDHQ02218 1023 aa14.3□□□□□ -0.12
HMGN1-208ENST00000443046 LBRQ14739 615 aaKnown RBP14.3□□□□□ -0.12
HMGN1-208ENST00000443046 CA9Q16790 459 aa14.3□□□□□ -0.12
HMGN1-208ENST00000443046 TPD52L1Q16890 204 aaPredicted RBP14.3□□□□□ -0.12
HMGN1-208ENST00000443046 FHL5Q5TD97 284 aa14.3□□□□□ -0.12
HMGN1-208ENST00000443046 DENND2CQ68D51 928 aa14.3□□□□□ -0.12
HMGN1-208ENST00000443046 DOK6Q6PKX4 331 aa14.3□□□□□ -0.12
HMGN1-208ENST00000443046 NCSTNQ92542 709 aa14.3□□□□□ -0.12
HMGN1-208ENST00000443046 COX14Q96I36 57 aa14.3□□□□□ -0.12
HMGN1-208ENST00000443046 ZNF599Q96NL3 588 aa14.3□□□□□ -0.12
HMGN1-208ENST00000443046 EIF3CQ99613 913 aaKnown RBP14.3□□□□□ -0.12
HMGN1-208ENST00000443046 VPS16Q9H269 839 aa14.3□□□□□ -0.12
HMGN1-208ENST00000443046 GPATCH2LQ9NWQ4 482 aa14.3□□□□□ -0.12
HMGN1-208ENST00000443046 TLK1Q9UKI8 766 aa14.3□□□□□ -0.12
HMGN1-208ENST00000443046 PHTF1Q9UMS5 762 aa14.3□□□□□ -0.12
HMGN1-208ENST00000443046 MED13Q9UHV7 2174 aa14.29□□□□□ -0.12
HMGN1-208ENST00000443046 ENO4A6NNW6 628 aa14.29□□□□□ -0.12
HMGN1-208ENST00000443046 EEF2KO00418 725 aaKnown RBP14.29□□□□□ -0.12
HMGN1-208ENST00000443046 VPS4BO75351 444 aa14.29□□□□□ -0.12
HMGN1-208ENST00000443046 CPP00450 1065 aa14.29□□□□□ -0.12
HMGN1-208ENST00000443046 RNF224P0DH78 156 aa14.29□□□□□ -0.12
HMGN1-208ENST00000443046 CYP2A6P11509 494 aaPredicted RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms