RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 RPS9P46781 194 aaKnown RBP7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 EIF3EP60228 445 aaKnown RBP7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 ARMC12Q5T9G4 340 aa7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 TRMT10BQ6PF06 316 aaKnown RBP7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 ADGRG6Q86SQ4 1221 aa7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 SETD3Q86TU7 594 aaPredicted RBP7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 SLC26A11Q86WA9 606 aa7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 IL17RCQ8NAC3 791 aa7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 GLMNQ92990 594 aa7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 NUDCD1Q96RS6 583 aa7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 SLC6A17Q9H1V8 727 aa7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 FBRSQ9HAH7 460 aa7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 TMEM9BQ9NQ34 198 aa7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 CHMP2BQ9UQN3 213 aa7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 TECTAO75443 2155 aa7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 CPED1A4D0V7 1026 aa7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 GOLGA8RI6L899 631 aa7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 CACNB4O00305 520 aaPredicted RBP7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 GFRA2O00451 464 aa7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 ZW10O43264 779 aa7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 MAP3K7O43318 606 aa7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 CCDC22O60826 627 aa7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 FESP07332 822 aa7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 RBP3P10745 1247 aa7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 CD1EP15812 388 aa7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 KRT15P19012 456 aa7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 TPSB2P20231 275 aa7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 CRABP2P29373 138 aa7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 HLA-FP30511 346 aa7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 OPRD1P41143 372 aa7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 TPSAB1Q15661 275 aa7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 DBN1Q16643 649 aa7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 CARD16Q5EG05 197 aa7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 MSANTD2Q6P1R3 559 aa7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 MARK2Q7KZI7 788 aaKnown RBP7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 NT5C3BQ969T7 300 aa7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 FAM111AQ96PZ2 611 aa7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 HAPLN3Q96S86 360 aa7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 LRRC3Q9BY71 257 aa7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 TRPV5Q9NQA5 729 aa7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 VPS45Q9NRW7 570 aa7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 ETNK2Q9NVF9 386 aa7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 SLC6A14Q9UN76 642 aa7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 ILVBLA1L0T0 632 aa7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 DCDC2BA2VCK2 349 aa7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 H3BM21 787 aa7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 FCHO1O14526 889 aa7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 BCAT2O15382 392 aaPredicted RBP7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 BIRC5O15392 142 aa7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 PAK4O96013 591 aaPredicted RBP7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 RETP07949 1114 aa7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 ELFN1P0C7U0 828 aa7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 CYP2A6P11509 494 aaPredicted RBP7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 GOT1P17174 413 aa7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 TGM2P21980 687 aa7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 KELP23276 732 aa7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 MAPKAPK2P49137 400 aa7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 ZNF135P52742 658 aaPredicted RBP7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 ACTR3P61158 418 aa7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 NHLH1Q02575 133 aa7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 ELP6Q0PNE2 266 aa7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 BST1Q10588 318 aa7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 SEMA5AQ13591 1074 aa7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 DPYSL2Q16555 572 aa7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 LRRC73Q5JTD7 316 aa7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 ATXN7L2Q5T6C5 722 aaPredicted RBP7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 TEDDM1Q5T9Z0 273 aa7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 ITPRIPL1Q6GPH6 555 aa7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 APCDD1Q8J025 514 aa7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 LPCAT1Q8NF37 534 aa7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 MDGA1Q8NFP4 955 aa7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 GAB3Q8WWW8 586 aa7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 SLC13A1Q9BZW2 595 aa7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 SLC7A5P2Q9GIP4 190 aa7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 ZNF385DQ9H6B1 395 aa7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 SEMA4GQ9NTN9 838 aa7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 WASF2Q9Y6W5 498 aa7.39□□□□□ -1.23
CDC42BPA-208ENST00000442054 MYO18AQ92614 2054 aaKnown RBP7.38□□□□□ -1.23
CDC42BPA-208ENST00000442054 SHISA7A6NL88 538 aa7.38□□□□□ -1.23
CDC42BPA-208ENST00000442054 PDZK1P1A8MUH7 402 aa7.38□□□□□ -1.23
CDC42BPA-208ENST00000442054 PRRT4C9JH25 899 aa7.38□□□□□ -1.23
CDC42BPA-208ENST00000442054 BPGMP07738 259 aa7.38□□□□□ -1.23
CDC42BPA-208ENST00000442054 VAV1P15498 845 aa7.38□□□□□ -1.23
CDC42BPA-208ENST00000442054 PHBP35232 272 aa7.38□□□□□ -1.23
CDC42BPA-208ENST00000442054 CSNK1EP49674 416 aaKnown RBP7.38□□□□□ -1.23
CDC42BPA-208ENST00000442054 PDK2Q15119 407 aa7.38□□□□□ -1.23
CDC42BPA-208ENST00000442054 CAPN12Q6ZSI9 719 aa7.38□□□□□ -1.23
CDC42BPA-208ENST00000442054 RFX8Q6ZV50 586 aa7.38□□□□□ -1.23
CDC42BPA-208ENST00000442054 C14orf80Q86SX3 495 aa7.38□□□□□ -1.23
CDC42BPA-208ENST00000442054 TMEM150AQ86TG1 271 aa7.38□□□□□ -1.23
CDC42BPA-208ENST00000442054 HID1Q8IV36 788 aa7.38□□□□□ -1.23
CDC42BPA-208ENST00000442054 SLC25A41Q8N5S1 370 aa7.38□□□□□ -1.23
CDC42BPA-208ENST00000442054 RBM15BQ8NDT2 890 aaKnown RBP7.38□□□□□ -1.23
CDC42BPA-208ENST00000442054 CEP76Q8TAP6 659 aa7.38□□□□□ -1.23
CDC42BPA-208ENST00000442054 WBP2Q969T9 261 aa7.38□□□□□ -1.23
CDC42BPA-208ENST00000442054 LRRC39Q96DD0 335 aa7.38□□□□□ -1.23
CDC42BPA-208ENST00000442054 DCUN1D1Q96GG9 259 aa7.38□□□□□ -1.23
CDC42BPA-208ENST00000442054 FEM1AQ9BSK4 669 aa7.38□□□□□ -1.23
CDC42BPA-208ENST00000442054 IL36AQ9UHA7 158 aa7.38□□□□□ -1.23
CDC42BPA-208ENST00000442054 VPS51Q9UID3 782 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms