RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 ATP6V1C1P21283 382 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 NTSR1P30989 418 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 KIR2DL1P43626 348 aaPredicted RBP4.77□□□□□ -1.65
EDEM3-203ENST00000439962 PSMD8P48556 350 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 KPNA2P52292 529 aaKnown RBP4.77□□□□□ -1.65
EDEM3-203ENST00000439962 ST8SIA6P61647 398 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 MRPS35P82673 323 aaKnown RBP4.77□□□□□ -1.65
EDEM3-203ENST00000439962 STX3Q13277 289 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 ZNF177Q13360 481 aaPredicted RBP4.77□□□□□ -1.65
EDEM3-203ENST00000439962 PRPSAP1Q14558 356 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 PPP2R5DQ14738 602 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 LBRQ14739 615 aaKnown RBP4.77□□□□□ -1.65
EDEM3-203ENST00000439962 STARD3Q14849 445 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 EFTUD2Q15029 972 aaKnown RBP eCLIP4.77□□□□□ -1.65
EDEM3-203ENST00000439962 MPPE1Q53F39 396 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 KCTD11Q693B1 232 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 ZC3H14Q6PJT7 736 aaKnown RBP4.77□□□□□ -1.65
EDEM3-203ENST00000439962 Q6ZNB5 142 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 RFX8Q6ZV50 586 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 NUDT18Q6ZVK8 323 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 KDELC2Q7Z4H8 507 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 MTDHQ86UE4 582 aaKnown RBP4.77□□□□□ -1.65
EDEM3-203ENST00000439962 CNTN4Q8IWV2 1026 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 LMNTD2Q8IXW0 634 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 PIWIL2Q8TC59 973 aaKnown RBP4.77□□□□□ -1.65
EDEM3-203ENST00000439962 PPP4R1Q8TF05 950 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 PDCD6IPQ8WUM4 868 aaKnown RBP4.77□□□□□ -1.65
EDEM3-203ENST00000439962 CFAP36Q96G28 342 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 HSPA12BQ96MM6 686 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 EPAS1Q99814 870 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 MCMBPQ9BTE3 642 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 VCX3BQ9H321 246 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 MLXIPLQ9NP71 852 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 TMEM74BQ9NUR3 256 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 OBP2AQ9NY56 170 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 STX18Q9P2W9 335 aaKnown RBP4.77□□□□□ -1.65
EDEM3-203ENST00000439962 BCAP29Q9UHQ4 241 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 INTS6Q9UL03 887 aaKnown RBP4.77□□□□□ -1.65
EDEM3-203ENST00000439962 TLR6Q9Y2C9 796 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 FCF1Q9Y324 198 aaKnown RBP4.77□□□□□ -1.65
EDEM3-203ENST00000439962 HBS1LQ9Y450 684 aaKnown RBP4.77□□□□□ -1.65
EDEM3-203ENST00000439962 MFHAS1Q9Y4C4 1052 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 APC2O95996 2303 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 A0A0U1RQS6 177 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 A0A1W2PP55 124 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 WASH4PA8MWX3 477 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 RNF103O00237 685 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 DFFAO00273 331 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 EEF2KO00418 725 aaKnown RBP4.77□□□□□ -1.65
EDEM3-203ENST00000439962 KPNA3O00505 521 aaPredicted RBP4.77□□□□□ -1.65
EDEM3-203ENST00000439962 FCHO1O14526 889 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 GYG2O15488 501 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 SMAD6O43541 496 aaKnown RBP4.77□□□□□ -1.65
EDEM3-203ENST00000439962 PLIN3O60664 434 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 GJB3O75712 270 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 TM7SF2O76062 418 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 METTL18O95568 372 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 PRKCGP05129 697 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 GABRG2P18507 467 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 ACSL1P33121 698 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 ADRA1BP35368 520 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 ACVRL1P37023 503 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 VHLP40337 213 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 CXCR3P49682 368 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 LIMK2P53671 638 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 NAA20P61599 178 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 TMPRSS15P98073 1019 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 ZBTB16Q05516 673 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 BTKQ06187 659 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 SLC10A2Q12908 348 aaPredicted RBP4.77□□□□□ -1.65
EDEM3-203ENST00000439962 SLC14A2Q15849 920 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 CA9Q16790 459 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 TMCO4Q5TGY1 634 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 OTUD1Q5VV17 481 aaPredicted RBP4.77□□□□□ -1.65
EDEM3-203ENST00000439962 SNX30Q5VWJ9 437 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 NAPEPLDQ6IQ20 393 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 TIGD7Q6NT04 549 aaPredicted RBP4.77□□□□□ -1.65
EDEM3-203ENST00000439962 CLEC14AQ86T13 490 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 CTAGE3PQ8IX95 158 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 ETFBKMTQ8IXQ9 262 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 ATP6V0D2Q8N8Y2 350 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 CLDN23Q96B33 292 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 PLD4Q96BZ4 506 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 SIPA1Q96FS4 1042 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 CERS2Q96G23 380 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 BTN2A3PQ96KV6 586 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 HAPLN3Q96S86 360 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 CDK5RAP1Q96SZ6 601 aaKnown RBP4.77□□□□□ -1.65
EDEM3-203ENST00000439962 RBBP8Q99708 897 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 CCDC106Q9BWC9 280 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 CXorf56Q9H5V9 222 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 POLMQ9NP87 494 aaPredicted RBP4.77□□□□□ -1.65
EDEM3-203ENST00000439962 COMMD8Q9NX08 183 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 BFARQ9NZS9 450 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 TXNDC16Q9P2K2 825 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 VTI1BQ9UEU0 232 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 SERGEFQ9UGK8 458 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 CORO1CQ9ULV4 474 aaPredicted RBP4.77□□□□□ -1.65
EDEM3-203ENST00000439962 CA5BQ9Y2D0 317 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 AAR2Q9Y312 384 aaKnown RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms