RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 NCKIPSDQ9NZQ3 722 aa13.89□□□□□ -0.19
PTCHD3-201ENST00000438700 MARCH4Q9P2E8 410 aaPredicted RBP13.89□□□□□ -0.19
PTCHD3-201ENST00000438700 CRYL1Q9Y2S2 319 aa13.89□□□□□ -0.19
PTCHD3-201ENST00000438700 DENND4CQ5VZ89 1909 aa13.88□□□□□ -0.19
PTCHD3-201ENST00000438700 H3BNC9 293 aa13.88□□□□□ -0.19
PTCHD3-201ENST00000438700 MUSKO15146 869 aa13.88□□□□□ -0.19
PTCHD3-201ENST00000438700 VILLO15195 856 aa13.88□□□□□ -0.19
PTCHD3-201ENST00000438700 LRG1P02750 347 aa13.88□□□□□ -0.19
PTCHD3-201ENST00000438700 ADH1AP07327 375 aa13.88□□□□□ -0.19
PTCHD3-201ENST00000438700 GABRR2P28476 465 aa13.88□□□□□ -0.19
PTCHD3-201ENST00000438700 CDH4P55283 916 aa13.88□□□□□ -0.19
PTCHD3-201ENST00000438700 SMAD3P84022 425 aaKnown RBP13.88□□□□□ -0.19
PTCHD3-201ENST00000438700 CYP4F8P98187 520 aa13.88□□□□□ -0.19
PTCHD3-201ENST00000438700 GRM2Q14416 872 aa13.88□□□□□ -0.19
PTCHD3-201ENST00000438700 MYBPC3Q14896 1274 aa13.88□□□□□ -0.19
PTCHD3-201ENST00000438700 FAM83EQ2M2I3 478 aa13.88□□□□□ -0.19
PTCHD3-201ENST00000438700 ADGRF1Q5T601 910 aa13.88□□□□□ -0.19
PTCHD3-201ENST00000438700 PGM2L1Q6PCE3 622 aa13.88□□□□□ -0.19
PTCHD3-201ENST00000438700 RBM44Q6ZP01 1051 aaKnown RBP13.88□□□□□ -0.19
PTCHD3-201ENST00000438700 PIM3Q86V86 326 aa13.88□□□□□ -0.19
PTCHD3-201ENST00000438700 METTL25Q8N6Q8 603 aa13.88□□□□□ -0.19
PTCHD3-201ENST00000438700 ARRDC2Q8TBH0 407 aa13.88□□□□□ -0.19
PTCHD3-201ENST00000438700 CALML6Q8TD86 181 aa13.88□□□□□ -0.19
PTCHD3-201ENST00000438700 SP7Q8TDD2 431 aaPredicted RBP13.88□□□□□ -0.19
PTCHD3-201ENST00000438700 BLOC1S5Q8TDH9 187 aa13.88□□□□□ -0.19
PTCHD3-201ENST00000438700 ANKRD49Q8WVL7 239 aa13.88□□□□□ -0.19
PTCHD3-201ENST00000438700 ITFG2Q969R8 447 aa13.88□□□□□ -0.19
PTCHD3-201ENST00000438700 PHF12Q96QT6 1004 aa13.88□□□□□ -0.19
PTCHD3-201ENST00000438700 RTKNQ9BST9 563 aa13.88□□□□□ -0.19
PTCHD3-201ENST00000438700 ARL5AQ9Y689 179 aa13.88□□□□□ -0.19
PTCHD3-201ENST00000438700 C15orf38-AP3S2A0A0A6YYH1 394 aa13.88□□□□□ -0.19
PTCHD3-201ENST00000438700 H3BNX3 289 aa13.88□□□□□ -0.19
PTCHD3-201ENST00000438700 PRAMEF11O60813 436 aa13.88□□□□□ -0.19
PTCHD3-201ENST00000438700 SLC4A1P02730 911 aa13.88□□□□□ -0.19
PTCHD3-201ENST00000438700 ASLP04424 464 aa13.88□□□□□ -0.19
PTCHD3-201ENST00000438700 TFAP2AP05549 437 aa13.88□□□□□ -0.19
PTCHD3-201ENST00000438700 C8AP07357 584 aa13.88□□□□□ -0.19
PTCHD3-201ENST00000438700 ATP6V1B1P15313 513 aa13.88□□□□□ -0.19
PTCHD3-201ENST00000438700 PPARGP37231 505 aaPredicted RBP13.88□□□□□ -0.19
PTCHD3-201ENST00000438700 LEPRP48357 1165 aaKnown RBP13.88□□□□□ -0.19
PTCHD3-201ENST00000438700 POLD2P49005 469 aa13.88□□□□□ -0.19
PTCHD3-201ENST00000438700 PRKAA2P54646 552 aa13.88□□□□□ -0.19
PTCHD3-201ENST00000438700 GNA12Q03113 381 aa13.88□□□□□ -0.19
PTCHD3-201ENST00000438700 NSUN2Q08J23 767 aaKnown RBP eCLIP13.88□□□□□ -0.19
PTCHD3-201ENST00000438700 GALNT3Q14435 633 aa13.88□□□□□ -0.19
PTCHD3-201ENST00000438700 TECRLQ5HYJ1 363 aa13.88□□□□□ -0.19
PTCHD3-201ENST00000438700 HECTD2Q5U5R9 776 aa13.88□□□□□ -0.19
PTCHD3-201ENST00000438700 PLPP4Q5VZY2 271 aa13.88□□□□□ -0.19
PTCHD3-201ENST00000438700 AAGABQ6PD74 315 aa13.88□□□□□ -0.19
PTCHD3-201ENST00000438700 LILRA6Q6PI73 481 aa13.88□□□□□ -0.19
PTCHD3-201ENST00000438700 KIAA0408Q6ZU52 694 aa13.88□□□□□ -0.19
PTCHD3-201ENST00000438700 GAREM2Q75VX8 874 aa13.88□□□□□ -0.19
PTCHD3-201ENST00000438700 ARPINQ7Z6K5 226 aa13.88□□□□□ -0.19
PTCHD3-201ENST00000438700 HS6ST3Q8IZP7 471 aa13.88□□□□□ -0.19
PTCHD3-201ENST00000438700 FBXW8Q8N3Y1 598 aa13.88□□□□□ -0.19
PTCHD3-201ENST00000438700 TEX26Q8N6G2 289 aa13.88□□□□□ -0.19
PTCHD3-201ENST00000438700 KDM1BQ8NB78 822 aa13.88□□□□□ -0.19
PTCHD3-201ENST00000438700 TTC16Q8NEE8 873 aa13.88□□□□□ -0.19
PTCHD3-201ENST00000438700 OR7D4Q8NG98 312 aa13.88□□□□□ -0.19
PTCHD3-201ENST00000438700 CCDC160A6NGH7 325 aa13.87□□□□□ -0.19
PTCHD3-201ENST00000438700 HIDE1A8MVS5 230 aa13.87□□□□□ -0.19
PTCHD3-201ENST00000438700 HDCP19113 662 aa13.87□□□□□ -0.19
PTCHD3-201ENST00000438700 ATP5F1P24539 256 aaPredicted RBP13.87□□□□□ -0.19
PTCHD3-201ENST00000438700 PRDX6P30041 224 aa13.87□□□□□ -0.19
PTCHD3-201ENST00000438700 CDKN2DP55273 166 aa13.87□□□□□ -0.19
PTCHD3-201ENST00000438700 BTKQ06187 659 aa13.87□□□□□ -0.19
PTCHD3-201ENST00000438700 ADGRG6Q86SQ4 1221 aa13.87□□□□□ -0.19
PTCHD3-201ENST00000438700 KREMEN2Q8NCW0 462 aa13.87□□□□□ -0.19
PTCHD3-201ENST00000438700 TBATAQ96M53 351 aa13.87□□□□□ -0.19
PTCHD3-201ENST00000438700 TNFRSF12AQ9NP84 129 aa13.87□□□□□ -0.19
PTCHD3-201ENST00000438700 RHBDL2Q9NX52 303 aa13.87□□□□□ -0.19
PTCHD3-201ENST00000438700 AK5Q9Y6K8 562 aa13.87□□□□□ -0.19
PTCHD3-201ENST00000438700 MYO7AQ13402 2215 aa13.87□□□□□ -0.19
PTCHD3-201ENST00000438700 DOCK6Q96HP0 2047 aa13.87□□□□□ -0.19
PTCHD3-201ENST00000438700 MROH6A6NGR9 719 aa13.87□□□□□ -0.19
PTCHD3-201ENST00000438700 CLDN11O75508 207 aa13.87□□□□□ -0.19
PTCHD3-201ENST00000438700 LTA4HP09960 611 aaKnown RBP13.87□□□□□ -0.19
PTCHD3-201ENST00000438700 ATXN1LP0C7T5 689 aaKnown RBP13.87□□□□□ -0.19
PTCHD3-201ENST00000438700 HOXD9P28356 352 aaPredicted RBP13.87□□□□□ -0.19
PTCHD3-201ENST00000438700 BMPR1AP36894 532 aa13.87□□□□□ -0.19
PTCHD3-201ENST00000438700 KPNA2P52292 529 aaKnown RBP13.87□□□□□ -0.19
PTCHD3-201ENST00000438700 CHN2P52757 468 aa13.87□□□□□ -0.19
PTCHD3-201ENST00000438700 ATXN3P54252 364 aaPredicted RBP13.87□□□□□ -0.19
PTCHD3-201ENST00000438700 ZXDBP98169 803 aa13.87□□□□□ -0.19
PTCHD3-201ENST00000438700 AGAP9Q5VTM2 703 aa13.87□□□□□ -0.19
PTCHD3-201ENST00000438700 IL31Q6EBC2 164 aa13.87□□□□□ -0.19
PTCHD3-201ENST00000438700 CCDC149Q6ZUS6 474 aa13.87□□□□□ -0.19
PTCHD3-201ENST00000438700 PIWIL4Q7Z3Z4 852 aaKnown RBP13.87□□□□□ -0.19
PTCHD3-201ENST00000438700 TMC8Q8IU68 726 aa13.87□□□□□ -0.19
PTCHD3-201ENST00000438700 ADAMTS19Q8TE59 1207 aa13.87□□□□□ -0.19
PTCHD3-201ENST00000438700 HERVK_113Q902F9 699 aa13.87□□□□□ -0.19
PTCHD3-201ENST00000438700 RCN3Q96D15 328 aa13.87□□□□□ -0.19
PTCHD3-201ENST00000438700 MAGEH1Q9H213 219 aa13.87□□□□□ -0.19
PTCHD3-201ENST00000438700 PDFQ9HBH1 243 aa13.87□□□□□ -0.19
PTCHD3-201ENST00000438700 VTI1BQ9UEU0 232 aa13.87□□□□□ -0.19
PTCHD3-201ENST00000438700 CPQQ9Y646 472 aa13.87□□□□□ -0.19
PTCHD3-201ENST00000438700 RGSL1A5PLK6 1076 aa13.86□□□□□ -0.19
PTCHD3-201ENST00000438700 A8MT66 165 aa13.86□□□□□ -0.19
PTCHD3-201ENST00000438700 LDB2O43679 373 aa13.86□□□□□ -0.19
PTCHD3-201ENST00000438700 OLFM2O95897 454 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms