RNA–Protein interactions for RNA: ENST00000436412.1

NIF3L1-208, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 3

Gene NIF3L1, Length 479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-208ENST00000436412 ANKRD40Q6AI12 368 aa8.47□□□□□ -1.05
NIF3L1-208ENST00000436412 C11orf57Q6ZUT1 292 aaPredicted RBP8.47□□□□□ -1.05
NIF3L1-208ENST00000436412 SLC26A9Q7LBE3 791 aa8.47□□□□□ -1.05
NIF3L1-208ENST00000436412 SPRED1Q7Z699 444 aa8.47□□□□□ -1.05
NIF3L1-208ENST00000436412 TFAP2DQ7Z6R9 452 aa8.47□□□□□ -1.05
NIF3L1-208ENST00000436412 LRRN4CLQ8ND94 238 aa8.47□□□□□ -1.05
NIF3L1-208ENST00000436412 ZNF397Q8NF99 534 aaPredicted RBP8.47□□□□□ -1.05
NIF3L1-208ENST00000436412 OR7D4Q8NG98 312 aa8.47□□□□□ -1.05
NIF3L1-208ENST00000436412 CXorf40AQ8TE69 158 aa8.47□□□□□ -1.05
NIF3L1-208ENST00000436412 NKD1Q969G9 470 aa8.47□□□□□ -1.05
NIF3L1-208ENST00000436412 PGAP3Q96FM1 320 aaPredicted RBP8.47□□□□□ -1.05
NIF3L1-208ENST00000436412 FAM81BQ96LP2 452 aa8.47□□□□□ -1.05
NIF3L1-208ENST00000436412 KREMEN1Q96MU8 473 aa8.47□□□□□ -1.05
NIF3L1-208ENST00000436412 TAAR9Q96RI9 348 aa8.47□□□□□ -1.05
NIF3L1-208ENST00000436412 SPON2Q9BUD6 331 aa8.47□□□□□ -1.05
NIF3L1-208ENST00000436412 TKTL2Q9H0I9 626 aa8.47□□□□□ -1.05
NIF3L1-208ENST00000436412 RETREG1Q9H6L5 497 aa8.47□□□□□ -1.05
NIF3L1-208ENST00000436412 PCDHGA3Q9Y5H0 932 aa8.47□□□□□ -1.05
NIF3L1-208ENST00000436412 DGKBQ9Y6T7 804 aa8.47□□□□□ -1.05
NIF3L1-208ENST00000436412 RNF215Q9Y6U7 377 aa8.47□□□□□ -1.05
NIF3L1-208ENST00000436412 CHD5Q8TDI0 1954 aa8.46□□□□□ -1.05
NIF3L1-208ENST00000436412 FBN2P35556 2912 aa8.46□□□□□ -1.06
NIF3L1-208ENST00000436412 ZNF891A8MT65 544 aaPredicted RBP8.46□□□□□ -1.06
NIF3L1-208ENST00000436412 THAP12O43422 761 aa8.46□□□□□ -1.06
NIF3L1-208ENST00000436412 DAB1O75553 588 aa8.46□□□□□ -1.06
NIF3L1-208ENST00000436412 GRAP2O75791 330 aa8.46□□□□□ -1.06
NIF3L1-208ENST00000436412 CPNE6O95741 557 aa8.46□□□□□ -1.06
NIF3L1-208ENST00000436412 SRP54P61011 504 aaKnown RBP8.46□□□□□ -1.06
NIF3L1-208ENST00000436412 SLC6A3Q01959 620 aa8.46□□□□□ -1.06
NIF3L1-208ENST00000436412 GNA12Q03113 381 aa8.46□□□□□ -1.06
NIF3L1-208ENST00000436412 NFATC4Q14934 902 aa8.46□□□□□ -1.06
NIF3L1-208ENST00000436412 ALG11Q2TAA5 492 aa8.46□□□□□ -1.06
NIF3L1-208ENST00000436412 MYLK3Q32MK0 819 aa8.46□□□□□ -1.06
NIF3L1-208ENST00000436412 PHF19Q5T6S3 580 aa8.46□□□□□ -1.06
NIF3L1-208ENST00000436412 ZNF658Q5TYW1 1059 aaPredicted RBP8.46□□□□□ -1.06
NIF3L1-208ENST00000436412 OLFML1Q6UWY5 402 aa8.46□□□□□ -1.06
NIF3L1-208ENST00000436412 ENOSF1Q7L5Y1 443 aa8.46□□□□□ -1.06
NIF3L1-208ENST00000436412 ATG4DQ86TL0 474 aaPredicted RBP8.46□□□□□ -1.06
NIF3L1-208ENST00000436412 TTC7BQ86TV6 843 aa8.46□□□□□ -1.06
NIF3L1-208ENST00000436412 PIM3Q86V86 326 aa8.46□□□□□ -1.06
NIF3L1-208ENST00000436412 ZDHHC17Q8IUH5 632 aa8.46□□□□□ -1.06
NIF3L1-208ENST00000436412 ARHGEF19Q8IW93 802 aa8.46□□□□□ -1.06
NIF3L1-208ENST00000436412 RYBPQ8N488 228 aaPredicted RBP8.46□□□□□ -1.06
NIF3L1-208ENST00000436412 Q8N9G6 341 aaPredicted RBP8.46□□□□□ -1.06
NIF3L1-208ENST00000436412 TP53I13Q8NBR0 393 aaPredicted RBP8.46□□□□□ -1.06
NIF3L1-208ENST00000436412 CCDC112Q8NEF3 446 aa8.46□□□□□ -1.06
NIF3L1-208ENST00000436412 OR2AP1Q8NGE2 309 aa8.46□□□□□ -1.06
NIF3L1-208ENST00000436412 C9orf43Q8TAL5 461 aaPredicted RBP8.46□□□□□ -1.06
NIF3L1-208ENST00000436412 NT5C3BQ969T7 300 aa8.46□□□□□ -1.06
NIF3L1-208ENST00000436412 TSACCQ96A04 125 aaPredicted RBP8.46□□□□□ -1.06
NIF3L1-208ENST00000436412 PLPPR2Q96GM1 343 aa8.46□□□□□ -1.06
NIF3L1-208ENST00000436412 SPATA32Q96LK8 384 aa8.46□□□□□ -1.06
NIF3L1-208ENST00000436412 FRMD6Q96NE9 622 aa8.46□□□□□ -1.06
NIF3L1-208ENST00000436412 GSDMAQ96QA5 445 aa8.46□□□□□ -1.06
NIF3L1-208ENST00000436412 HAPLN3Q96S86 360 aa8.46□□□□□ -1.06
NIF3L1-208ENST00000436412 CPXM1Q96SM3 734 aa8.46□□□□□ -1.06
NIF3L1-208ENST00000436412 RBM15Q96T37 977 aaKnown RBP eCLIP8.46□□□□□ -1.06
NIF3L1-208ENST00000436412 ASPSCR1Q9BZE9 553 aa8.46□□□□□ -1.06
NIF3L1-208ENST00000436412 TM6SF2Q9BZW4 377 aa8.46□□□□□ -1.06
NIF3L1-208ENST00000436412 MBNL1Q9NR56 388 aaKnown RBP8.46□□□□□ -1.06
NIF3L1-208ENST00000436412 PIGVQ9NUD9 493 aa8.46□□□□□ -1.06
NIF3L1-208ENST00000436412 MPP6Q9NZW5 540 aa8.46□□□□□ -1.06
NIF3L1-208ENST00000436412 DKK3Q9UBP4 350 aa8.46□□□□□ -1.06
NIF3L1-208ENST00000436412 KLQ9UEF7 1012 aa8.46□□□□□ -1.06
NIF3L1-208ENST00000436412 GGT7Q9UJ14 662 aa8.46□□□□□ -1.06
NIF3L1-208ENST00000436412 STAP1Q9ULZ2 295 aa8.46□□□□□ -1.06
NIF3L1-208ENST00000436412 ITM2BQ9Y287 266 aa8.46□□□□□ -1.06
NIF3L1-208ENST00000436412 CCDC168Q8NDH2 2452 aa8.45□□□□□ -1.06
NIF3L1-208ENST00000436412 POLEQ07864 2286 aa8.45□□□□□ -1.06
NIF3L1-208ENST00000436412 BLACEA4D250 179 aa8.45□□□□□ -1.06
NIF3L1-208ENST00000436412 KRIT1O00522 736 aa8.45□□□□□ -1.06
NIF3L1-208ENST00000436412 SLITRK5O94991 958 aa8.45□□□□□ -1.06
NIF3L1-208ENST00000436412 ZNF202O95125 648 aa8.45□□□□□ -1.06
NIF3L1-208ENST00000436412 CD160O95971 181 aa8.45□□□□□ -1.06
NIF3L1-208ENST00000436412 TNFP01375 233 aa8.45□□□□□ -1.06
NIF3L1-208ENST00000436412 UGT2B4P06133 528 aa8.45□□□□□ -1.06
NIF3L1-208ENST00000436412 PMS1P54277 932 aaKnown RBP8.45□□□□□ -1.06
NIF3L1-208ENST00000436412 ARF5P84085 180 aa8.45□□□□□ -1.06
NIF3L1-208ENST00000436412 RAD51Q06609 339 aa8.45□□□□□ -1.06
NIF3L1-208ENST00000436412 ELP6Q0PNE2 266 aa8.45□□□□□ -1.06
NIF3L1-208ENST00000436412 TRA2AQ13595 282 aaKnown RBP eCLIP8.45□□□□□ -1.06
NIF3L1-208ENST00000436412 SLBPQ14493 270 aaKnown RBP eCLIP8.45□□□□□ -1.06
NIF3L1-208ENST00000436412 HLTFQ14527 1009 aaKnown RBP eCLIP8.45□□□□□ -1.06
NIF3L1-208ENST00000436412 IRF4Q15306 451 aa8.45□□□□□ -1.06
NIF3L1-208ENST00000436412 KLHL40Q2TBA0 621 aa8.45□□□□□ -1.06
NIF3L1-208ENST00000436412 CCDC40Q4G0X9 1142 aa8.45□□□□□ -1.06
NIF3L1-208ENST00000436412 TMEM52BQ4KMG9 183 aa8.45□□□□□ -1.06
NIF3L1-208ENST00000436412 C14orf28Q4W4Y0 310 aa8.45□□□□□ -1.06
NIF3L1-208ENST00000436412 ENPP7Q6UWV6 458 aa8.45□□□□□ -1.06
NIF3L1-208ENST00000436412 GDPD4Q6W3E5 623 aa8.45□□□□□ -1.06
NIF3L1-208ENST00000436412 FAM183BPQ6ZVS7 135 aa8.45□□□□□ -1.06
NIF3L1-208ENST00000436412 RD3Q7Z3Z2 195 aa8.45□□□□□ -1.06
NIF3L1-208ENST00000436412 WDTC1Q8N5D0 677 aa8.45□□□□□ -1.06
NIF3L1-208ENST00000436412 C1orf131Q8NDD1 294 aaKnown RBP8.45□□□□□ -1.06
NIF3L1-208ENST00000436412 FAM46DQ8NEK8 389 aa8.45□□□□□ -1.06
NIF3L1-208ENST00000436412 SPATA20Q8TB22 786 aa8.45□□□□□ -1.06
NIF3L1-208ENST00000436412 HCAR2Q8TDS4 363 aa8.45□□□□□ -1.06
NIF3L1-208ENST00000436412 ARHGEF2Q92974 986 aaKnown RBP8.45□□□□□ -1.06
NIF3L1-208ENST00000436412 MIB2Q96AX9 1013 aa8.45□□□□□ -1.06
NIF3L1-208ENST00000436412 SLC45A3Q96JT2 553 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms