RNA–Protein interactions for RNA: ENST00000430158.5

USP40-205, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 1,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-205ENST00000430158 GPR26Q8NDV2 337 aa12.39□□□□□ -0.43
USP40-205ENST00000430158 FAM174AQ8TBP5 190 aa12.39□□□□□ -0.43
USP40-205ENST00000430158 DTX3LQ8TDB6 740 aa12.39□□□□□ -0.43
USP40-205ENST00000430158 BRSK1Q8TDC3 778 aa12.39□□□□□ -0.43
USP40-205ENST00000430158 SCAMP4Q969E2 229 aa12.39□□□□□ -0.43
USP40-205ENST00000430158 NUS1Q96E22 293 aa12.39□□□□□ -0.43
USP40-205ENST00000430158 RUNDC3BQ96NL0 473 aa12.39□□□□□ -0.43
USP40-205ENST00000430158 KRT12Q99456 494 aa12.39□□□□□ -0.43
USP40-205ENST00000430158 AGAP2Q99490 1192 aa12.39□□□□□ -0.43
USP40-205ENST00000430158 C19orf43Q9BQ61 176 aa12.39□□□□□ -0.43
USP40-205ENST00000430158 CAAP1Q9H8G2 361 aa12.39□□□□□ -0.43
USP40-205ENST00000430158 AASDHPPTQ9NRN7 309 aa12.39□□□□□ -0.43
USP40-205ENST00000430158 PIH1D1Q9NWS0 290 aaKnown RBP12.39□□□□□ -0.43
USP40-205ENST00000430158 KCTD5Q9NXV2 234 aa12.39□□□□□ -0.43
USP40-205ENST00000430158 PNMA8BQ9ULN7 279 aaPredicted RBP12.39□□□□□ -0.43
USP40-205ENST00000430158 ANKRD6Q9Y2G4 727 aa12.39□□□□□ -0.43
USP40-205ENST00000430158 PIKFYVEQ9Y2I7 2098 aa12.39□□□□□ -0.43
USP40-205ENST00000430158 GOLGA6CA6NDK9 693 aa12.38□□□□□ -0.43
USP40-205ENST00000430158 GOLGA6BA6NDN3 693 aa12.38□□□□□ -0.43
USP40-205ENST00000430158 MROH6A6NGR9 719 aa12.38□□□□□ -0.43
USP40-205ENST00000430158 GOLGA8CPA6NN73 597 aa12.38□□□□□ -0.43
USP40-205ENST00000430158 BHMG1C9JSJ3 638 aaPredicted RBP12.38□□□□□ -0.43
USP40-205ENST00000430158 CDX4O14627 284 aaPredicted RBP12.38□□□□□ -0.43
USP40-205ENST00000430158 TOR1BO14657 336 aa12.38□□□□□ -0.43
USP40-205ENST00000430158 FPGTO14772 594 aa12.38□□□□□ -0.43
USP40-205ENST00000430158 KHNYNO15037 678 aaKnown RBP12.38□□□□□ -0.43
USP40-205ENST00000430158 TTI1O43156 1089 aa12.38□□□□□ -0.43
USP40-205ENST00000430158 ZNF500O60304 480 aaPredicted RBP12.38□□□□□ -0.43
USP40-205ENST00000430158 GAS8O95995 478 aa12.38□□□□□ -0.43
USP40-205ENST00000430158 HOXC4P09017 264 aaPredicted RBP12.38□□□□□ -0.43
USP40-205ENST00000430158 GOLGA6DP0CG33 693 aa12.38□□□□□ -0.43
USP40-205ENST00000430158 CA5AP35218 305 aa12.38□□□□□ -0.43
USP40-205ENST00000430158 DCDC1P59894 354 aa12.38□□□□□ -0.43
USP40-205ENST00000430158 DR1Q01658 176 aa12.38□□□□□ -0.43
USP40-205ENST00000430158 C2orf54Q08AI8 447 aa12.38□□□□□ -0.43
USP40-205ENST00000430158 GRIK2Q13002 908 aa12.38□□□□□ -0.43
USP40-205ENST00000430158 MTM1Q13496 603 aa12.38□□□□□ -0.43
USP40-205ENST00000430158 TUBB2AQ13885 445 aa12.38□□□□□ -0.43
USP40-205ENST00000430158 DHX34Q14147 1143 aaKnown RBP12.38□□□□□ -0.43
USP40-205ENST00000430158 FZD2Q14332 565 aa12.38□□□□□ -0.43
USP40-205ENST00000430158 INPP5AQ14642 412 aa12.38□□□□□ -0.43
USP40-205ENST00000430158 STAT4Q14765 748 aa12.38□□□□□ -0.43
USP40-205ENST00000430158 SHBQ15464 509 aa12.38□□□□□ -0.43
USP40-205ENST00000430158 ZNF423Q2M1K9 1284 aa12.38□□□□□ -0.43
USP40-205ENST00000430158 CERCAMQ5T4B2 595 aa12.38□□□□□ -0.43
USP40-205ENST00000430158 DENND2CQ68D51 928 aa12.38□□□□□ -0.43
USP40-205ENST00000430158 PNCKQ6P2M8 343 aa12.38□□□□□ -0.43
USP40-205ENST00000430158 PRR23CQ6ZRP0 262 aa12.38□□□□□ -0.43
USP40-205ENST00000430158 LINC00523Q86TU6 105 aa12.38□□□□□ -0.43
USP40-205ENST00000430158 CAND1Q86VP6 1230 aaKnown RBP12.38□□□□□ -0.43
USP40-205ENST00000430158 MCUQ8NE86 351 aa12.38□□□□□ -0.43
USP40-205ENST00000430158 KIF18AQ8NI77 898 aa12.38□□□□□ -0.43
USP40-205ENST00000430158 BLOC1S5Q8TDH9 187 aa12.38□□□□□ -0.43
USP40-205ENST00000430158 PTCD2Q8WV60 388 aaKnown RBP12.38□□□□□ -0.43
USP40-205ENST00000430158 ZNF592Q92610 1267 aa12.38□□□□□ -0.43
USP40-205ENST00000430158 KLHDC7BQ96G42 594 aa12.38□□□□□ -0.43
USP40-205ENST00000430158 TUBB2BQ9BVA1 445 aa12.38□□□□□ -0.43
USP40-205ENST00000430158 RIOK2Q9BVS4 552 aaKnown RBP12.38□□□□□ -0.43
USP40-205ENST00000430158 C1QTNF7Q9BXJ2 289 aa12.38□□□□□ -0.43
USP40-205ENST00000430158 TEX101Q9BY14 249 aa12.38□□□□□ -0.43
USP40-205ENST00000430158 IL26Q9NPH9 171 aa12.38□□□□□ -0.43
USP40-205ENST00000430158 GOLGA6AQ9NYA3 693 aa12.38□□□□□ -0.43
USP40-205ENST00000430158 CD84Q9UIB8 345 aa12.38□□□□□ -0.43
USP40-205ENST00000430158 TMPRSS11EQ9UL52 423 aa12.38□□□□□ -0.43
USP40-205ENST00000430158 SNX11Q9Y5W9 270 aa12.38□□□□□ -0.43
USP40-205ENST00000430158 ARL5AQ9Y689 179 aa12.38□□□□□ -0.43
USP40-205ENST00000430158 ZFC3H1O60293 1989 aaKnown RBP12.38□□□□□ -0.43
USP40-205ENST00000430158 ASXL3Q9C0F0 2248 aa12.37□□□□□ -0.43
USP40-205ENST00000430158 SPTY2D1-AS1A0A0U1RR47 76 aa12.37□□□□□ -0.43
USP40-205ENST00000430158 A6NNZ2 444 aa12.37□□□□□ -0.43
USP40-205ENST00000430158 RAD51CO43502 376 aa12.37□□□□□ -0.43
USP40-205ENST00000430158 BUD23O43709 281 aaKnown RBP12.37□□□□□ -0.43
USP40-205ENST00000430158 CFIP05156 583 aa12.37□□□□□ -0.43
USP40-205ENST00000430158 THEGLP0DJG4 465 aa12.37□□□□□ -0.43
USP40-205ENST00000430158 ENGP17813 658 aa12.37□□□□□ -0.43
USP40-205ENST00000430158 MAGEA3P43357 314 aa12.37□□□□□ -0.43
USP40-205ENST00000430158 RABIFP47224 123 aa12.37□□□□□ -0.43
USP40-205ENST00000430158 YPEL5P62699 121 aa12.37□□□□□ -0.43
USP40-205ENST00000430158 BASP1P80723 227 aaKnown RBP12.37□□□□□ -0.43
USP40-205ENST00000430158 MRPS25P82663 173 aaKnown RBP12.37□□□□□ -0.43
USP40-205ENST00000430158 XIAPP98170 497 aa12.37□□□□□ -0.43
USP40-205ENST00000430158 CDH17Q12864 832 aa12.37□□□□□ -0.43
USP40-205ENST00000430158 TEAD4Q15561 434 aa12.37□□□□□ -0.43
USP40-205ENST00000430158 KCTD16Q68DU8 428 aa12.37□□□□□ -0.43
USP40-205ENST00000430158 LRRC8BQ6P9F7 803 aa12.37□□□□□ -0.43
USP40-205ENST00000430158 ADAMTSL4Q6UY14 1074 aa12.37□□□□□ -0.43
USP40-205ENST00000430158 DCP2Q8IU60 420 aaKnown RBP12.37□□□□□ -0.43
USP40-205ENST00000430158 AGGF1Q8N302 714 aaeCLIP12.37□□□□□ -0.43
USP40-205ENST00000430158 CCHCR1Q8TD31 782 aa12.37□□□□□ -0.43
USP40-205ENST00000430158 AP2M1Q96CW1 435 aa12.37□□□□□ -0.43
USP40-205ENST00000430158 RANBP9Q96S59 729 aa12.37□□□□□ -0.43
USP40-205ENST00000430158 TRIM51Q9BSJ1 452 aa12.37□□□□□ -0.43
USP40-205ENST00000430158 APOOQ9BUR5 198 aa12.37□□□□□ -0.43
USP40-205ENST00000430158 LGR4Q9BXB1 951 aa12.37□□□□□ -0.43
USP40-205ENST00000430158 GPR63Q9BZJ6 419 aa12.37□□□□□ -0.43
USP40-205ENST00000430158 CDH19Q9H159 772 aa12.37□□□□□ -0.43
USP40-205ENST00000430158 FAM83DQ9H4H8 585 aa12.37□□□□□ -0.43
USP40-205ENST00000430158 ERVMER34-1Q9H9K5 563 aa12.37□□□□□ -0.43
USP40-205ENST00000430158 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.37□□□□□ -0.43
USP40-205ENST00000430158 BPTFQ12830 3046 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms