RNA–Protein interactions for RNA: ENST00000429895.5

PTPRF-206, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 6,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-206ENST00000429895 FKBP1CQ5VVH2 108 aa15.37■□□□□ 0.05
PTPRF-206ENST00000429895 ABRAXAS1Q6UWZ7 409 aa15.37■□□□□ 0.05
PTPRF-206ENST00000429895 NET1Q7Z628 596 aaPredicted RBP15.37■□□□□ 0.05
PTPRF-206ENST00000429895 ATAD1Q8NBU5 361 aa15.37■□□□□ 0.05
PTPRF-206ENST00000429895 ZNF398Q8TD17 642 aa15.37■□□□□ 0.05
PTPRF-206ENST00000429895 CKAP2Q8WWK9 683 aa15.37■□□□□ 0.05
PTPRF-206ENST00000429895 PGM2Q96G03 612 aa15.37■□□□□ 0.05
PTPRF-206ENST00000429895 NPAS2Q99743 824 aa15.37■□□□□ 0.05
PTPRF-206ENST00000429895 IKZF2Q9UKS7 526 aa15.37■□□□□ 0.05
PTPRF-206ENST00000429895 CHN2P52757 468 aa15.37■□□□□ 0.05
PTPRF-206ENST00000429895 MON1AQ86VX9 555 aa15.37■□□□□ 0.05
PTPRF-206ENST00000429895 CLCC1Q96S66 551 aa15.37■□□□□ 0.05
PTPRF-206ENST00000429895 NECTIN3Q9NQS3 549 aa15.37■□□□□ 0.05
PTPRF-206ENST00000429895 PNPOQ9NVS9 261 aa15.37■□□□□ 0.05
PTPRF-206ENST00000429895 NWD1Q149M9 1564 aa15.37■□□□□ 0.05
PTPRF-206ENST00000429895 IFNGP01579 166 aa15.37■□□□□ 0.05
PTPRF-206ENST00000429895 FGBP02675 491 aa15.37■□□□□ 0.05
PTPRF-206ENST00000429895 ATP6V0D1P61421 351 aa15.37■□□□□ 0.05
PTPRF-206ENST00000429895 ACAP2Q15057 778 aa15.37■□□□□ 0.05
PTPRF-206ENST00000429895 MINDY4Q4G0A6 757 aa15.37■□□□□ 0.05
PTPRF-206ENST00000429895 ILDR1Q86SU0 546 aaPredicted RBP15.37■□□□□ 0.05
PTPRF-206ENST00000429895 ATCAYQ86WG3 371 aa15.37■□□□□ 0.05
PTPRF-206ENST00000429895 BSNDQ8WZ55 320 aa15.37■□□□□ 0.05
PTPRF-206ENST00000429895 TSSK3Q96PN8 268 aa15.37■□□□□ 0.05
PTPRF-206ENST00000429895 DSN1Q9H410 356 aa15.37■□□□□ 0.05
PTPRF-206ENST00000429895 ELOVL2Q9NXB9 296 aa15.37■□□□□ 0.05
PTPRF-206ENST00000429895 TAF4O00268 1085 aa15.37■□□□□ 0.05
PTPRF-206ENST00000429895 C1RP00736 705 aa15.37■□□□□ 0.05
PTPRF-206ENST00000429895 GALNT5Q7Z7M9 940 aa15.37■□□□□ 0.05
PTPRF-206ENST00000429895 C12orf56Q8IXR9 622 aa15.37■□□□□ 0.05
PTPRF-206ENST00000429895 ZNF483Q8TF39 744 aaPredicted RBP15.37■□□□□ 0.05
PTPRF-206ENST00000429895 CAPSLQ8WWF8 208 aa15.37■□□□□ 0.05
PTPRF-206ENST00000429895 CLP1Q92989 425 aaKnown RBP15.37■□□□□ 0.05
PTPRF-206ENST00000429895 MCRS1Q96EZ8 462 aa15.37■□□□□ 0.05
PTPRF-206ENST00000429895 AIF1LQ9BQI0 150 aa15.37■□□□□ 0.05
PTPRF-206ENST00000429895 SEMA3GQ9NS98 782 aa15.37■□□□□ 0.05
PTPRF-206ENST00000429895 VWA7Q9Y334 891 aa15.37■□□□□ 0.05
PTPRF-206ENST00000429895 MMP3P08254 477 aa15.37■□□□□ 0.05
PTPRF-206ENST00000429895 NELFEP18615 380 aaKnown RBP15.37■□□□□ 0.05
PTPRF-206ENST00000429895 NOMO3P69849 1222 aa15.37■□□□□ 0.05
PTPRF-206ENST00000429895 H3BM21 787 aa15.36■□□□□ 0.05
PTPRF-206ENST00000429895 ATG13O75143 517 aa15.36■□□□□ 0.05
PTPRF-206ENST00000429895 ARF4P18085 180 aaPredicted RBP15.36■□□□□ 0.05
PTPRF-206ENST00000429895 PPP2R2BQ00005 443 aa15.36■□□□□ 0.05
PTPRF-206ENST00000429895 PCDH1Q08174 1060 aa15.36■□□□□ 0.05
PTPRF-206ENST00000429895 PRKG2Q13237 762 aa15.36■□□□□ 0.05
PTPRF-206ENST00000429895 ZNF846Q147U1 533 aa15.36■□□□□ 0.05
PTPRF-206ENST00000429895 QPRTQ15274 297 aa15.36■□□□□ 0.05
PTPRF-206ENST00000429895 NAIF1Q69YI7 327 aaPredicted RBP15.36■□□□□ 0.05
PTPRF-206ENST00000429895 PHF13Q86YI8 300 aaPredicted RBP15.36■□□□□ 0.05
PTPRF-206ENST00000429895 JOSD2Q8TAC2 188 aa15.36■□□□□ 0.05
PTPRF-206ENST00000429895 EXD2Q9NVH0 621 aa15.36■□□□□ 0.05
PTPRF-206ENST00000429895 LYNP07948 512 aa15.36■□□□□ 0.05
PTPRF-206ENST00000429895 SAGP10523 405 aaPredicted RBP15.36■□□□□ 0.05
PTPRF-206ENST00000429895 LAG3P18627 525 aa15.36■□□□□ 0.05
PTPRF-206ENST00000429895 ADARP55265 1226 aaKnown RBP15.36■□□□□ 0.05
PTPRF-206ENST00000429895 USP4Q13107 963 aa15.36■□□□□ 0.05
PTPRF-206ENST00000429895 OR4K2Q8NGD2 314 aa15.36■□□□□ 0.05
PTPRF-206ENST00000429895 KCNS3Q9BQ31 491 aa15.36■□□□□ 0.05
PTPRF-206ENST00000429895 NMUR1Q9HB89 426 aa15.36■□□□□ 0.05
PTPRF-206ENST00000429895 PRDM8Q9NQV8 689 aa15.36■□□□□ 0.05
PTPRF-206ENST00000429895 RASSF1Q9NS23 344 aa15.36■□□□□ 0.05
PTPRF-206ENST00000429895 SLC22A3O75751 556 aa15.36■□□□□ 0.05
PTPRF-206ENST00000429895 PCBP1Q15365 356 aaKnown RBP eCLIP15.36■□□□□ 0.052e-6■■■■□ 20.8
PTPRF-206ENST00000429895 ZNF730Q6ZMV8 503 aa15.36■□□□□ 0.05
PTPRF-206ENST00000429895 POC5Q8NA72 575 aa15.36■□□□□ 0.05
PTPRF-206ENST00000429895 TSPAN14Q8NG11 270 aa15.36■□□□□ 0.05
PTPRF-206ENST00000429895 CD99L2Q8TCZ2 262 aa15.36■□□□□ 0.05
PTPRF-206ENST00000429895 APOLD1Q96LR9 279 aa15.36■□□□□ 0.05
PTPRF-206ENST00000429895 TRMT13Q9NUP7 481 aaKnown RBP15.36■□□□□ 0.05
PTPRF-206ENST00000429895 OR2AG2A6NM03 316 aa15.36■□□□□ 0.05
PTPRF-206ENST00000429895 TRIM3O75382 744 aaPredicted RBP15.36■□□□□ 0.05
PTPRF-206ENST00000429895 FGF19O95750 216 aa15.36■□□□□ 0.05
PTPRF-206ENST00000429895 ERVK-21P61565 698 aa15.36■□□□□ 0.05
PTPRF-206ENST00000429895 PRSS58Q8IYP2 241 aa15.36■□□□□ 0.05
PTPRF-206ENST00000429895 KBTBD7Q8WVZ9 684 aa15.36■□□□□ 0.05
PTPRF-206ENST00000429895 EXOSC8Q96B26 276 aaKnown RBP15.36■□□□□ 0.05
PTPRF-206ENST00000429895 P2RY11Q96G91 374 aa15.36■□□□□ 0.05
PTPRF-206ENST00000429895 SSR3Q9UNL2 185 aa15.36■□□□□ 0.05
PTPRF-206ENST00000429895 TIPRLO75663 272 aa15.36■□□□□ 0.05
PTPRF-206ENST00000429895 SLC26A3P40879 764 aa15.36■□□□□ 0.05
PTPRF-206ENST00000429895 AUHQ13825 339 aaKnown RBP15.36■□□□□ 0.05
PTPRF-206ENST00000429895 LRRC38Q5VT99 294 aa15.36■□□□□ 0.05
PTPRF-206ENST00000429895 ZHX1-C8orf76Q96EF9 292 aa15.36■□□□□ 0.05
PTPRF-206ENST00000429895 C15orf41Q9Y2V0 281 aa15.36■□□□□ 0.05
PTPRF-206ENST00000429895 SCGNO76038 276 aa15.35■□□□□ 0.05
PTPRF-206ENST00000429895 STARP49675 285 aa15.35■□□□□ 0.05
PTPRF-206ENST00000429895 ZBTB2Q8N680 514 aa15.35■□□□□ 0.05
PTPRF-206ENST00000429895 UBR7Q8N806 425 aa15.35■□□□□ 0.05
PTPRF-206ENST00000429895 PJA1Q8NG27 643 aa15.35■□□□□ 0.05
PTPRF-206ENST00000429895 XAGE5Q8WWM1 108 aa15.35■□□□□ 0.05
PTPRF-206ENST00000429895 MBD2Q9UBB5 411 aa15.35■□□□□ 0.05
PTPRF-206ENST00000429895 GGA2Q9UJY4 613 aa15.35■□□□□ 0.05
PTPRF-206ENST00000429895 DIP2BQ9P265 1576 aa15.35■□□□□ 0.05
PTPRF-206ENST00000429895 XKRYO14609 159 aa15.35■□□□□ 0.05
PTPRF-206ENST00000429895 IDO1P14902 403 aa15.35■□□□□ 0.05
PTPRF-206ENST00000429895 CES1P23141 567 aa15.35■□□□□ 0.05
PTPRF-206ENST00000429895 MAT2AP31153 395 aaKnown RBP15.35■□□□□ 0.05
PTPRF-206ENST00000429895 PTPN9P43378 593 aa15.35■□□□□ 0.05
PTPRF-206ENST00000429895 ELF3P78545 371 aaPredicted RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms