RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 CA4P22748 312 aa14.84□□□□□ -0.03
MSH5-208ENST00000429846 CES1P23141 567 aa14.84□□□□□ -0.03
MSH5-208ENST00000429846 AK4P27144 223 aaPredicted RBP14.84□□□□□ -0.03
MSH5-208ENST00000429846 ADCY8P40145 1251 aa14.84□□□□□ -0.03
MSH5-208ENST00000429846 ETV5P41161 510 aa14.84□□□□□ -0.03
MSH5-208ENST00000429846 ACTR1BP42025 376 aa14.84□□□□□ -0.03
MSH5-208ENST00000429846 ACTR1AP61163 376 aa14.84□□□□□ -0.03
MSH5-208ENST00000429846 CTBSQ01459 385 aa14.84□□□□□ -0.03
MSH5-208ENST00000429846 LRP8Q14114 963 aa14.84□□□□□ -0.03
MSH5-208ENST00000429846 KRT81Q14533 505 aa14.84□□□□□ -0.03
MSH5-208ENST00000429846 NR1I3Q14994 352 aa14.84□□□□□ -0.03
MSH5-208ENST00000429846 C16orf72Q14CZ0 275 aa14.84□□□□□ -0.03
MSH5-208ENST00000429846 AMZ1Q400G9 498 aa14.84□□□□□ -0.03
MSH5-208ENST00000429846 HGSNATQ68CP4 663 aa14.84□□□□□ -0.03
MSH5-208ENST00000429846 LRRC66Q68CR7 880 aa14.84□□□□□ -0.03
MSH5-208ENST00000429846 TXNRD3NBQ6F5E7 133 aa14.84□□□□□ -0.03
MSH5-208ENST00000429846 ADAMTSL4Q6UY14 1074 aa14.84□□□□□ -0.03
MSH5-208ENST00000429846 TSPAN33Q86UF1 283 aa14.84□□□□□ -0.03
MSH5-208ENST00000429846 NLRP8Q86W28 1048 aa14.84□□□□□ -0.03
MSH5-208ENST00000429846 NAGSQ8N159 534 aa14.84□□□□□ -0.03
MSH5-208ENST00000429846 FAM71BQ8TC56 605 aa14.84□□□□□ -0.03
MSH5-208ENST00000429846 IQCDQ96DY2 449 aa14.84□□□□□ -0.03
MSH5-208ENST00000429846 OR2M4Q96R27 311 aa14.84□□□□□ -0.03
MSH5-208ENST00000429846 SEMA3CQ99985 751 aa14.84□□□□□ -0.03
MSH5-208ENST00000429846 NUDT22Q9BRQ3 303 aa14.84□□□□□ -0.03
MSH5-208ENST00000429846 THAP2Q9H0W7 228 aa14.84□□□□□ -0.03
MSH5-208ENST00000429846 SUDS3Q9H7L9 328 aaPredicted RBP14.84□□□□□ -0.03
MSH5-208ENST00000429846 NT5MQ9NPB1 228 aa14.84□□□□□ -0.03
MSH5-208ENST00000429846 FOXJ2Q9P0K8 574 aa14.84□□□□□ -0.03
MSH5-208ENST00000429846 SDK2Q58EX2 2172 aa14.84□□□□□ -0.03
MSH5-208ENST00000429846 A0A0J9YYE9 177 aa14.83□□□□□ -0.04
MSH5-208ENST00000429846 STMND1H3BQB6 276 aa14.83□□□□□ -0.04
MSH5-208ENST00000429846 MYO1FO00160 1098 aa14.83□□□□□ -0.04
MSH5-208ENST00000429846 SOD1P00441 154 aa14.83□□□□□ -0.04
MSH5-208ENST00000429846 TRBC1P01850 177 aa14.83□□□□□ -0.04
MSH5-208ENST00000429846 GARSP41250 739 aaKnown RBP14.83□□□□□ -0.04
MSH5-208ENST00000429846 FASLGP48023 281 aa14.83□□□□□ -0.04
MSH5-208ENST00000429846 LIMK2P53671 638 aa14.83□□□□□ -0.04
MSH5-208ENST00000429846 EPHB1P54762 984 aa14.83□□□□□ -0.04
MSH5-208ENST00000429846 OR1D5P58170 312 aa14.83□□□□□ -0.04
MSH5-208ENST00000429846 GPLD1P80108 840 aa14.83□□□□□ -0.04
MSH5-208ENST00000429846 GALNT2Q10471 571 aa14.83□□□□□ -0.04
MSH5-208ENST00000429846 SQSTM1Q13501 440 aa14.83□□□□□ -0.04
MSH5-208ENST00000429846 HADHQ16836 314 aaKnown RBP14.83□□□□□ -0.04
MSH5-208ENST00000429846 CCDC122Q5T0U0 273 aa14.83□□□□□ -0.04
MSH5-208ENST00000429846 CCDC112Q8NEF3 446 aa14.83□□□□□ -0.04
MSH5-208ENST00000429846 OR4D9Q8NGE8 314 aa14.83□□□□□ -0.04
MSH5-208ENST00000429846 FATE1Q969F0 183 aa14.83□□□□□ -0.04
MSH5-208ENST00000429846 AP2M1Q96CW1 435 aa14.83□□□□□ -0.04
MSH5-208ENST00000429846 ARHGAP9Q9BRR9 750 aa14.83□□□□□ -0.04
MSH5-208ENST00000429846 NUP85Q9BW27 656 aa14.83□□□□□ -0.04
MSH5-208ENST00000429846 PCDHGA4Q9Y5G9 962 aa14.83□□□□□ -0.04
MSH5-208ENST00000429846 PCDHGA3Q9Y5H0 932 aa14.83□□□□□ -0.04
MSH5-208ENST00000429846 TENM4Q6N022 2769 aa14.82□□□□□ -0.04
MSH5-208ENST00000429846 IGHV1OR21-1A0A087WYE8 117 aa14.82□□□□□ -0.04
MSH5-208ENST00000429846 IGHV5-10-1A0A0J9YXX1 117 aa14.82□□□□□ -0.04
MSH5-208ENST00000429846 MFSD11O43934 449 aa14.82□□□□□ -0.04
MSH5-208ENST00000429846 SERPING1P05155 500 aa14.82□□□□□ -0.04
MSH5-208ENST00000429846 CYP1A2P05177 515 aa14.82□□□□□ -0.04
MSH5-208ENST00000429846 PDHA1P08559 390 aa14.82□□□□□ -0.04
MSH5-208ENST00000429846 SFTPCP11686 197 aa14.82□□□□□ -0.04
MSH5-208ENST00000429846 CTPS1P17812 591 aa14.82□□□□□ -0.04
MSH5-208ENST00000429846 IL4RP24394 825 aa14.82□□□□□ -0.04
MSH5-208ENST00000429846 CD1CP29017 333 aa14.82□□□□□ -0.04
MSH5-208ENST00000429846 ITKQ08881 620 aa14.82□□□□□ -0.04
MSH5-208ENST00000429846 PAFAH1B3Q15102 231 aaKnown RBP14.82□□□□□ -0.04
MSH5-208ENST00000429846 LINC00303Q3SY05 128 aa14.82□□□□□ -0.04
MSH5-208ENST00000429846 DOK6Q6PKX4 331 aa14.82□□□□□ -0.04
MSH5-208ENST00000429846 ZFAND4Q86XD8 727 aa14.82□□□□□ -0.04
MSH5-208ENST00000429846 NRSN1Q8IZ57 195 aa14.82□□□□□ -0.04
MSH5-208ENST00000429846 AGBL5Q8NDL9 886 aa14.82□□□□□ -0.04
MSH5-208ENST00000429846 EXD1Q8NHP7 514 aa14.82□□□□□ -0.04
MSH5-208ENST00000429846 PTCD2Q8WV60 388 aaKnown RBP14.82□□□□□ -0.04
MSH5-208ENST00000429846 PATE1Q8WXA2 126 aa14.82□□□□□ -0.04
MSH5-208ENST00000429846 MAML1Q92585 1016 aa14.82□□□□□ -0.04
MSH5-208ENST00000429846 CCDC74BQ96LY2 380 aa14.82□□□□□ -0.04
MSH5-208ENST00000429846 TAAR9Q96RI9 348 aa14.82□□□□□ -0.04
MSH5-208ENST00000429846 ZNF670Q9BS34 389 aa14.82□□□□□ -0.04
MSH5-208ENST00000429846 TDRD1Q9BXT4 1180 aaKnown RBP14.82□□□□□ -0.04
MSH5-208ENST00000429846 ABCG8Q9H221 673 aa14.82□□□□□ -0.04
MSH5-208ENST00000429846 ST14Q9Y5Y6 855 aa14.82□□□□□ -0.04
MSH5-208ENST00000429846 SPTA1P02549 2419 aa14.82□□□□□ -0.04
MSH5-208ENST00000429846 AGRPO00253 132 aa14.81□□□□□ -0.04
MSH5-208ENST00000429846 MATN3O15232 486 aa14.81□□□□□ -0.04
MSH5-208ENST00000429846 SLC28A2O43868 658 aa14.81□□□□□ -0.04
MSH5-208ENST00000429846 THRAP10827 490 aa14.81□□□□□ -0.04
MSH5-208ENST00000429846 CCNCP24863 283 aa14.81□□□□□ -0.04
MSH5-208ENST00000429846 POLD2P49005 469 aa14.81□□□□□ -0.04
MSH5-208ENST00000429846 ATP1A2P50993 1020 aa14.81□□□□□ -0.04
MSH5-208ENST00000429846 STC1P52823 247 aa14.81□□□□□ -0.04
MSH5-208ENST00000429846 RPL26P61254 145 aaKnown RBP14.81□□□□□ -0.04
MSH5-208ENST00000429846 TPM4P67936 248 aa14.81□□□□□ -0.04
MSH5-208ENST00000429846 PTSQ03393 145 aa14.81□□□□□ -0.04
MSH5-208ENST00000429846 SRSF6Q13247 344 aaKnown RBP14.81□□□□□ -0.04
MSH5-208ENST00000429846 IQCB1Q15051 598 aa14.81□□□□□ -0.04
MSH5-208ENST00000429846 IFI16Q16666 785 aaKnown RBP14.81□□□□□ -0.04
MSH5-208ENST00000429846 PYCR3Q53H96 274 aa14.81□□□□□ -0.04
MSH5-208ENST00000429846 NCBP2-AS2Q69YL0 99 aa14.81□□□□□ -0.04
MSH5-208ENST00000429846 ZNF574Q6ZN55 896 aaPredicted RBP14.81□□□□□ -0.04
MSH5-208ENST00000429846 GALNT13Q8IUC8 556 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms