RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 OGFRL1Q5TC84 451 aaPredicted RBP12.61□□□□□ -0.39
CPNE4-201ENST00000429747 KCTD8Q6ZWB6 473 aa12.61□□□□□ -0.39
CPNE4-201ENST00000429747 VPS37AQ8NEZ2 397 aa12.61□□□□□ -0.39
CPNE4-201ENST00000429747 ARNTL2Q8WYA1 636 aa12.61□□□□□ -0.39
CPNE4-201ENST00000429747 ROPN1LQ96C74 230 aa12.61□□□□□ -0.39
CPNE4-201ENST00000429747 C6orf62Q9GZU0 229 aaPredicted RBP12.61□□□□□ -0.39
CPNE4-201ENST00000429747 CACYBPQ9HB71 228 aaKnown RBP12.61□□□□□ -0.39
CPNE4-201ENST00000429747 POLR3HQ9Y535 204 aaPredicted RBP12.61□□□□□ -0.39
CPNE4-201ENST00000429747 ASB3Q9Y575 518 aa12.61□□□□□ -0.39
CPNE4-201ENST00000429747 CBFA2T3O75081 653 aa12.6□□□□□ -0.39
CPNE4-201ENST00000429747 GOT2P00505 430 aaKnown RBP12.6□□□□□ -0.39
CPNE4-201ENST00000429747 SLC35E2BP0CK96 405 aa12.6□□□□□ -0.39
CPNE4-201ENST00000429747 HLA-DPA1P20036 260 aa12.6□□□□□ -0.39
CPNE4-201ENST00000429747 ATP6V0D1P61421 351 aa12.6□□□□□ -0.39
CPNE4-201ENST00000429747 GALNT2Q10471 571 aa12.6□□□□□ -0.39
CPNE4-201ENST00000429747 LCP2Q13094 533 aa12.6□□□□□ -0.39
CPNE4-201ENST00000429747 TAZQ16635 292 aa12.6□□□□□ -0.39
CPNE4-201ENST00000429747 PNPLA1Q8N8W4 532 aa12.6□□□□□ -0.39
CPNE4-201ENST00000429747 CLHC1Q8NHS4 586 aa12.6□□□□□ -0.39
CPNE4-201ENST00000429747 TRIM8Q9BZR9 551 aa12.6□□□□□ -0.39
CPNE4-201ENST00000429747 ARMC7Q9H6L4 198 aa12.6□□□□□ -0.39
CPNE4-201ENST00000429747 TMEM165Q9HC07 324 aa12.6□□□□□ -0.39
CPNE4-201ENST00000429747 TMEM161AQ9NX61 479 aa12.6□□□□□ -0.39
CPNE4-201ENST00000429747 C3orf18Q9UK00 162 aa12.6□□□□□ -0.39
CPNE4-201ENST00000429747 A0A0G2JLL6 359 aaPredicted RBP12.6□□□□□ -0.39
CPNE4-201ENST00000429747 PRRG1O14668 218 aa12.6□□□□□ -0.39
CPNE4-201ENST00000429747 RGS14O43566 566 aa12.6□□□□□ -0.39
CPNE4-201ENST00000429747 RPL9P32969 192 aaKnown RBP12.6□□□□□ -0.39
CPNE4-201ENST00000429747 PRRT2Q7Z6L0 340 aaPredicted RBP12.6□□□□□ -0.39
CPNE4-201ENST00000429747 OR2T12Q8NG77 320 aa12.6□□□□□ -0.39
CPNE4-201ENST00000429747 UTP15Q8TED0 518 aaKnown RBP12.6□□□□□ -0.39
CPNE4-201ENST00000429747 TPD52L3Q96J77 140 aa12.6□□□□□ -0.39
CPNE4-201ENST00000429747 CHID1Q9BWS9 393 aa12.6□□□□□ -0.39
CPNE4-201ENST00000429747 RERGLQ9H628 205 aa12.6□□□□□ -0.39
CPNE4-201ENST00000429747 FANCEQ9HB96 536 aa12.6□□□□□ -0.39
CPNE4-201ENST00000429747 SPASTQ9UBP0 616 aa12.6□□□□□ -0.39
CPNE4-201ENST00000429747 TPRKBQ9Y3C4 175 aa12.6□□□□□ -0.39
CPNE4-201ENST00000429747 TLL2Q9Y6L7 1015 aa12.6□□□□□ -0.39
CPNE4-201ENST00000429747 G3V2L1 256 aa12.6□□□□□ -0.39
CPNE4-201ENST00000429747 GPIP06744 558 aa12.6□□□□□ -0.39
CPNE4-201ENST00000429747 CYP4B1P13584 511 aa12.6□□□□□ -0.39
CPNE4-201ENST00000429747 TRAP1Q12931 704 aaKnown RBP12.6□□□□□ -0.39
CPNE4-201ENST00000429747 CCDC85BQ15834 202 aaPredicted RBP12.6□□□□□ -0.39
CPNE4-201ENST00000429747 NOL9Q5SY16 702 aaKnown RBP12.6□□□□□ -0.39
CPNE4-201ENST00000429747 GALNT18Q6P9A2 607 aa12.6□□□□□ -0.39
CPNE4-201ENST00000429747 ERI1Q8IV48 349 aaKnown RBP12.6□□□□□ -0.39
CPNE4-201ENST00000429747 CEP97Q8IW35 865 aa12.6□□□□□ -0.39
CPNE4-201ENST00000429747 CASP10Q92851 521 aa12.6□□□□□ -0.39
CPNE4-201ENST00000429747 ERLEC1Q96DZ1 483 aa12.6□□□□□ -0.39
CPNE4-201ENST00000429747 B3GALT6Q96L58 329 aa12.6□□□□□ -0.39
CPNE4-201ENST00000429747 SMOQ99835 787 aa12.6□□□□□ -0.39
CPNE4-201ENST00000429747 PRDM5Q9NQX1 630 aaPredicted RBP12.6□□□□□ -0.39
CPNE4-201ENST00000429747 TBC1D30Q9Y2I9 924 aa12.6□□□□□ -0.39
CPNE4-201ENST00000429747 COL2A1P02458 1487 aaPredicted RBP12.6□□□□□ -0.39
CPNE4-201ENST00000429747 TMEM247A6NEH6 219 aa12.59□□□□□ -0.39
CPNE4-201ENST00000429747 PRKCGP05129 697 aa12.59□□□□□ -0.39
CPNE4-201ENST00000429747 EDNRBP24530 442 aa12.59□□□□□ -0.39
CPNE4-201ENST00000429747 RPL26P61254 145 aaKnown RBP12.59□□□□□ -0.39
CPNE4-201ENST00000429747 HPCAP84074 193 aa12.59□□□□□ -0.39
CPNE4-201ENST00000429747 PRKCQQ04759 706 aa12.59□□□□□ -0.39
CPNE4-201ENST00000429747 HNRNPDQ14103 355 aaKnown RBP12.59□□□□□ -0.39
CPNE4-201ENST00000429747 SYTL3Q4VX76 610 aa12.59□□□□□ -0.39
CPNE4-201ENST00000429747 AFTPHQ6ULP2 937 aa12.59□□□□□ -0.39
CPNE4-201ENST00000429747 ZNF621Q6ZSS3 439 aa12.59□□□□□ -0.39
CPNE4-201ENST00000429747 MON1AQ86VX9 555 aa12.59□□□□□ -0.39
CPNE4-201ENST00000429747 SPPL2AQ8TCT8 520 aa12.59□□□□□ -0.39
CPNE4-201ENST00000429747 KIFC1Q9BW19 673 aa12.59□□□□□ -0.39
CPNE4-201ENST00000429747 BBS2Q9BXC9 721 aa12.59□□□□□ -0.39
CPNE4-201ENST00000429747 ATAD3AQ9NVI7 634 aa12.59□□□□□ -0.39
CPNE4-201ENST00000429747 PLK2Q9NYY3 685 aa12.59□□□□□ -0.39
CPNE4-201ENST00000429747 RPP40O75818 363 aaKnown RBP12.59□□□□□ -0.39
CPNE4-201ENST00000429747 STAU1O95793 577 aaKnown RBP12.59□□□□□ -0.39
CPNE4-201ENST00000429747 IMPDH1P20839 514 aa12.59□□□□□ -0.39
CPNE4-201ENST00000429747 MTHFRP42898 656 aa12.59□□□□□ -0.39
CPNE4-201ENST00000429747 PRIM2P49643 509 aa12.59□□□□□ -0.39
CPNE4-201ENST00000429747 DEFA1P59665 94 aa12.59□□□□□ -0.39
CPNE4-201ENST00000429747 DEFA3P59666 94 aa12.59□□□□□ -0.39
CPNE4-201ENST00000429747 SPIDRQ14159 915 aa12.59□□□□□ -0.39
CPNE4-201ENST00000429747 TIGD5Q53EQ6 642 aa12.59□□□□□ -0.39
CPNE4-201ENST00000429747 SLC44A2Q8IWA5 706 aaPredicted RBP12.59□□□□□ -0.39
CPNE4-201ENST00000429747 NPWQ8N729 165 aa12.59□□□□□ -0.39
CPNE4-201ENST00000429747 RTL3Q8N8U3 475 aaKnown RBP12.59□□□□□ -0.39
CPNE4-201ENST00000429747 ATAD1Q8NBU5 361 aa12.59□□□□□ -0.39
CPNE4-201ENST00000429747 TM6SF2Q9BZW4 377 aa12.59□□□□□ -0.39
CPNE4-201ENST00000429747 ADGRE2Q9UHX3 823 aa12.59□□□□□ -0.39
CPNE4-201ENST00000429747 ABT1Q9ULW3 272 aaKnown RBP12.59□□□□□ -0.39
CPNE4-201ENST00000429747 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.59□□□□□ -0.39
CPNE4-201ENST00000429747 SLC7A4O43246 635 aa12.59□□□□□ -0.39
CPNE4-201ENST00000429747 HTRA2O43464 458 aaPredicted RBP12.59□□□□□ -0.39
CPNE4-201ENST00000429747 ULK1O75385 1050 aa12.59□□□□□ -0.39
CPNE4-201ENST00000429747 OR4F21O95013 312 aa12.59□□□□□ -0.39
CPNE4-201ENST00000429747 CDH3P22223 829 aa12.59□□□□□ -0.39
CPNE4-201ENST00000429747 SOAT1P35610 550 aa12.59□□□□□ -0.39
CPNE4-201ENST00000429747 CPOXP36551 454 aa12.59□□□□□ -0.39
CPNE4-201ENST00000429747 ST13P50502 369 aaKnown RBP12.59□□□□□ -0.39
CPNE4-201ENST00000429747 PSMD7P51665 324 aa12.59□□□□□ -0.39
CPNE4-201ENST00000429747 SLC10A7Q0GE19 358 aa12.59□□□□□ -0.39
CPNE4-201ENST00000429747 MAD2L1Q13257 205 aaPredicted RBP12.59□□□□□ -0.39
CPNE4-201ENST00000429747 CPSF6Q16630 551 aaKnown RBP eCLIP12.59□□□□□ -0.39
CPNE4-201ENST00000429747 DGUOKQ16854 277 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms