RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 CLIC5Q9NZA1 410 aa12.77□□□□□ -0.36
LDB3-205ENST00000429277 COLEC10Q9Y6Z7 277 aa12.77□□□□□ -0.36
LDB3-205ENST00000429277 ATRNO75882 1429 aa12.77□□□□□ -0.37
LDB3-205ENST00000429277 NRP2O60462 931 aa12.77□□□□□ -0.37
LDB3-205ENST00000429277 TCF4P15884 667 aa12.77□□□□□ -0.37
LDB3-205ENST00000429277 ADSLP30566 484 aaPredicted RBP12.77□□□□□ -0.37
LDB3-205ENST00000429277 BICRALQ6AI39 1079 aa12.77□□□□□ -0.37
LDB3-205ENST00000429277 ABHD15Q6UXT9 468 aa12.77□□□□□ -0.37
LDB3-205ENST00000429277 RASGEF1CQ8N431 466 aa12.77□□□□□ -0.37
LDB3-205ENST00000429277 LRRC17Q8N6Y2 441 aa12.77□□□□□ -0.37
LDB3-205ENST00000429277 ADAMTS15Q8TE58 950 aa12.77□□□□□ -0.37
LDB3-205ENST00000429277 ING4Q9UNL4 249 aa12.77□□□□□ -0.37
LDB3-205ENST00000429277 ERVW-1Q9UQF0 538 aa12.77□□□□□ -0.37
LDB3-205ENST00000429277 ADGRB1O14514 1584 aa12.77□□□□□ -0.37
LDB3-205ENST00000429277 SYN3O14994 580 aa12.77□□□□□ -0.37
LDB3-205ENST00000429277 TLL1O43897 1013 aa12.77□□□□□ -0.37
LDB3-205ENST00000429277 FGFR3P22607 806 aa12.77□□□□□ -0.37
LDB3-205ENST00000429277 RPL7AP62424 266 aaKnown RBP12.77□□□□□ -0.37
LDB3-205ENST00000429277 MYBPC1Q00872 1141 aa12.77□□□□□ -0.37
LDB3-205ENST00000429277 RALGDSQ12967 914 aa12.77□□□□□ -0.37
LDB3-205ENST00000429277 CTBP1Q13363 440 aa12.77□□□□□ -0.37
LDB3-205ENST00000429277 ZNF846Q147U1 533 aa12.77□□□□□ -0.37
LDB3-205ENST00000429277 ATXN7L2Q5T6C5 722 aaPredicted RBP12.77□□□□□ -0.37
LDB3-205ENST00000429277 TMPRSS11AQ6ZMR5 421 aa12.77□□□□□ -0.37
LDB3-205ENST00000429277 CHST15Q7LFX5 561 aaPredicted RBP12.77□□□□□ -0.37
LDB3-205ENST00000429277 ADCY4Q8NFM4 1077 aa12.77□□□□□ -0.37
LDB3-205ENST00000429277 ZNF354BQ96LW1 612 aa12.77□□□□□ -0.37
LDB3-205ENST00000429277 NEURL4Q96JN8 1562 aa12.76□□□□□ -0.37
LDB3-205ENST00000429277 TMCC2O75069 709 aa12.76□□□□□ -0.37
LDB3-205ENST00000429277 LYNP07948 512 aa12.76□□□□□ -0.37
LDB3-205ENST00000429277 DRD4P21917 467 aa12.76□□□□□ -0.37
LDB3-205ENST00000429277 PTDSS1P48651 473 aaKnown RBP12.76□□□□□ -0.37
LDB3-205ENST00000429277 SRP54P61011 504 aaKnown RBP12.76□□□□□ -0.37
LDB3-205ENST00000429277 SLC20A2Q08357 652 aa12.76□□□□□ -0.37
LDB3-205ENST00000429277 EEF1DP3Q658K8 133 aa12.76□□□□□ -0.37
LDB3-205ENST00000429277 AADACL2Q6P093 401 aa12.76□□□□□ -0.37
LDB3-205ENST00000429277 AHI1Q8N157 1196 aa12.76□□□□□ -0.37
LDB3-205ENST00000429277 SLC44A1Q8WWI5 657 aa12.76□□□□□ -0.37
LDB3-205ENST00000429277 CALML5Q9NZT1 146 aa12.76□□□□□ -0.37
LDB3-205ENST00000429277 GULP1Q9UBP9 304 aa12.76□□□□□ -0.37
LDB3-205ENST00000429277 PCDHGC3Q9UN70 934 aa12.76□□□□□ -0.37
LDB3-205ENST00000429277 H0Y858 1186 aa12.76□□□□□ -0.37
LDB3-205ENST00000429277 STX16-NPEPL1H3BU86 382 aa12.76□□□□□ -0.37
LDB3-205ENST00000429277 STX16O14662 325 aa12.76□□□□□ -0.37
LDB3-205ENST00000429277 MDM4O15151 490 aa12.76□□□□□ -0.37
LDB3-205ENST00000429277 TNFRSF21O75509 655 aa12.76□□□□□ -0.37
LDB3-205ENST00000429277 SASH3O75995 380 aa12.76□□□□□ -0.37
LDB3-205ENST00000429277 SELPP16109 830 aa12.76□□□□□ -0.37
LDB3-205ENST00000429277 OR1D2P34982 312 aa12.76□□□□□ -0.37
LDB3-205ENST00000429277 FAM151BQ6UXP7 276 aa12.76□□□□□ -0.37
LDB3-205ENST00000429277 RTL4Q6ZR62 310 aa12.76□□□□□ -0.37
LDB3-205ENST00000429277 C10orf107Q8IVU9 208 aa12.76□□□□□ -0.37
LDB3-205ENST00000429277 C2orf15Q8WU43 125 aaKnown RBP12.76□□□□□ -0.37
LDB3-205ENST00000429277 HAVCR1Q96D42 359 aa12.76□□□□□ -0.37
LDB3-205ENST00000429277 WDR12Q9GZL7 423 aaKnown RBP12.76□□□□□ -0.37
LDB3-205ENST00000429277 AGO3Q9H9G7 860 aaKnown RBP12.76□□□□□ -0.37
LDB3-205ENST00000429277 TOR4AQ9NXH8 423 aa12.76□□□□□ -0.37
LDB3-205ENST00000429277 SLC27A5Q9Y2P5 690 aa12.76□□□□□ -0.37
LDB3-205ENST00000429277 HBS1LQ9Y450 684 aaKnown RBP12.76□□□□□ -0.37
LDB3-205ENST00000429277 H3BM21 787 aa12.76□□□□□ -0.37
LDB3-205ENST00000429277 TGFB1I1O43294 461 aa12.76□□□□□ -0.37
LDB3-205ENST00000429277 TRBC1P01850 177 aa12.76□□□□□ -0.37
LDB3-205ENST00000429277 ASLP04424 464 aa12.76□□□□□ -0.37
LDB3-205ENST00000429277 NDUFV1P49821 464 aa12.76□□□□□ -0.37
LDB3-205ENST00000429277 CCNIQ14094 377 aa12.76□□□□□ -0.37
LDB3-205ENST00000429277 LPIN1Q14693 890 aa12.76□□□□□ -0.37
LDB3-205ENST00000429277 LARS2Q15031 903 aaKnown RBP12.76□□□□□ -0.37
LDB3-205ENST00000429277 SLC4A11Q8NBS3 891 aa12.76□□□□□ -0.37
LDB3-205ENST00000429277 LPPQ93052 612 aa12.76□□□□□ -0.37
LDB3-205ENST00000429277 AARSD1Q9BTE6 412 aaKnown RBP12.76□□□□□ -0.37
LDB3-205ENST00000429277 NXF3Q9H4D5 531 aaKnown RBP12.76□□□□□ -0.37
LDB3-205ENST00000429277 SGK2Q9HBY8 427 aa12.76□□□□□ -0.37
LDB3-205ENST00000429277 ZNF180Q9UJW8 692 aa12.76□□□□□ -0.37
LDB3-205ENST00000429277 CILPO75339 1184 aa12.76□□□□□ -0.37
LDB3-205ENST00000429277 ALOX5P09917 674 aa12.76□□□□□ -0.37
LDB3-205ENST00000429277 CTPS1P17812 591 aa12.76□□□□□ -0.37
LDB3-205ENST00000429277 KIR3DL1P43629 444 aa12.76□□□□□ -0.37
LDB3-205ENST00000429277 ARHGDIBP52566 201 aa12.76□□□□□ -0.37
LDB3-205ENST00000429277 CCL23P55773 120 aa12.76□□□□□ -0.37
LDB3-205ENST00000429277 TAS2R40P59535 323 aa12.76□□□□□ -0.37
LDB3-205ENST00000429277 MAXP61244 160 aa12.76□□□□□ -0.37
LDB3-205ENST00000429277 AP1S1P61966 158 aa12.76□□□□□ -0.37
LDB3-205ENST00000429277 RNASEH2BQ5TBB1 312 aaKnown RBP12.76□□□□□ -0.37
LDB3-205ENST00000429277 PTCHD4Q6ZW05 846 aa12.76□□□□□ -0.37
LDB3-205ENST00000429277 SLC26A9Q7LBE3 791 aa12.76□□□□□ -0.37
LDB3-205ENST00000429277 SAMD14Q8IZD0 417 aaPredicted RBP12.76□□□□□ -0.37
LDB3-205ENST00000429277 CPSF7Q8N684 471 aaKnown RBP12.76□□□□□ -0.37
LDB3-205ENST00000429277 CSPG4P5Q96PW8 444 aa12.76□□□□□ -0.37
LDB3-205ENST00000429277 TMEM27Q9HBJ8 222 aa12.76□□□□□ -0.37
LDB3-205ENST00000429277 MIOSQ9NXC5 875 aa12.76□□□□□ -0.37
LDB3-205ENST00000429277 MAP10Q9P2G4 905 aa12.76□□□□□ -0.37
LDB3-205ENST00000429277 LINC00032P0C843 101 aa12.75□□□□□ -0.37
LDB3-205ENST00000429277 HKDC1Q2TB90 917 aa12.75□□□□□ -0.37
LDB3-205ENST00000429277 MFSD5Q6N075 450 aa12.75□□□□□ -0.37
LDB3-205ENST00000429277 ZBTB2Q8N680 514 aa12.75□□□□□ -0.37
LDB3-205ENST00000429277 NKD2Q969F2 451 aaPredicted RBP12.75□□□□□ -0.37
LDB3-205ENST00000429277 PDCD10Q9BUL8 212 aa12.75□□□□□ -0.37
LDB3-205ENST00000429277 CNPPD1Q9BV87 410 aa12.75□□□□□ -0.37
LDB3-205ENST00000429277 MIR1-1HGQ9H1L0 117 aa12.75□□□□□ -0.37
LDB3-205ENST00000429277 MAGEH1Q9H213 219 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms