RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 LHCGRP22888 699 aa18.24■□□□□ 0.51
UPK3BP1-201ENST00000428678 CDKAL1Q5VV42 579 aa18.24■□□□□ 0.51
UPK3BP1-201ENST00000428678 ACAD10Q6JQN1 1059 aa18.24■□□□□ 0.51
UPK3BP1-201ENST00000428678 LURAP1LQ8IV03 231 aa18.24■□□□□ 0.51
UPK3BP1-201ENST00000428678 TP53INP2Q8IXH6 220 aa18.24■□□□□ 0.51
UPK3BP1-201ENST00000428678 NLGN4XQ8N0W4 816 aa18.24■□□□□ 0.51
UPK3BP1-201ENST00000428678 NLGN4YQ8NFZ3 816 aaPredicted RBP18.24■□□□□ 0.51
UPK3BP1-201ENST00000428678 SPOCK2Q92563 424 aa18.24■□□□□ 0.51
UPK3BP1-201ENST00000428678 TEFMQ96QE5 360 aaKnown RBP18.24■□□□□ 0.51
UPK3BP1-201ENST00000428678 PEBP4Q96S96 227 aa18.24■□□□□ 0.51
UPK3BP1-201ENST00000428678 SLC38A3Q99624 504 aa18.24■□□□□ 0.51
UPK3BP1-201ENST00000428678 CTRCQ99895 268 aa18.24■□□□□ 0.51
UPK3BP1-201ENST00000428678 NUP62CLQ9H1M0 184 aa18.24■□□□□ 0.51
UPK3BP1-201ENST00000428678 TMEM98Q9Y2Y6 226 aa18.24■□□□□ 0.51
UPK3BP1-201ENST00000428678 NPIPB15A6NHN6 443 aaPredicted RBP18.23■□□□□ 0.51
UPK3BP1-201ENST00000428678 A8MU76 341 aa18.23■□□□□ 0.51
UPK3BP1-201ENST00000428678 PSMD11O00231 422 aa18.23■□□□□ 0.51
UPK3BP1-201ENST00000428678 GP1BBP13224 206 aa18.23■□□□□ 0.51
UPK3BP1-201ENST00000428678 TEAD1P28347 426 aa18.23■□□□□ 0.51
UPK3BP1-201ENST00000428678 GPR1P46091 355 aa18.23■□□□□ 0.51
UPK3BP1-201ENST00000428678 CDC20Q12834 499 aa18.23■□□□□ 0.51
UPK3BP1-201ENST00000428678 NCAPHQ15003 741 aa18.23■□□□□ 0.51
UPK3BP1-201ENST00000428678 PTPRRQ15256 657 aa18.23■□□□□ 0.51
UPK3BP1-201ENST00000428678 CT47A1Q5JQC4 288 aaPredicted RBP18.23■□□□□ 0.51
UPK3BP1-201ENST00000428678 MARK2Q7KZI7 788 aaKnown RBP18.23■□□□□ 0.51
UPK3BP1-201ENST00000428678 TSPAN33Q86UF1 283 aa18.23■□□□□ 0.51
UPK3BP1-201ENST00000428678 UNC5BQ8IZJ1 945 aa18.23■□□□□ 0.51
UPK3BP1-201ENST00000428678 BMPERQ8N8U9 685 aa18.23■□□□□ 0.51
UPK3BP1-201ENST00000428678 OR10G6Q8NH81 332 aa18.23■□□□□ 0.51
UPK3BP1-201ENST00000428678 ENOX1Q8TC92 643 aaKnown RBP18.23■□□□□ 0.51
UPK3BP1-201ENST00000428678 RTP4Q96DX8 246 aa18.23■□□□□ 0.51
UPK3BP1-201ENST00000428678 ZNF599Q96NL3 588 aa18.23■□□□□ 0.51
UPK3BP1-201ENST00000428678 NOD2Q9HC29 1040 aa18.23■□□□□ 0.51
UPK3BP1-201ENST00000428678 PHTF1Q9UMS5 762 aa18.23■□□□□ 0.51
UPK3BP1-201ENST00000428678 LOC101059948A0A1B0GTJ6 334 aa18.22■□□□□ 0.51
UPK3BP1-201ENST00000428678 ATMINO43313 823 aaPredicted RBP18.22■□□□□ 0.51
UPK3BP1-201ENST00000428678 PRPSAP2O60256 369 aa18.22■□□□□ 0.51
UPK3BP1-201ENST00000428678 MAP3K6O95382 1288 aa18.22■□□□□ 0.51
UPK3BP1-201ENST00000428678 CR2P20023 1033 aa18.22■□□□□ 0.51
UPK3BP1-201ENST00000428678 MAP4P27816 1152 aaKnown RBP18.22■□□□□ 0.51
UPK3BP1-201ENST00000428678 HSPA9P38646 679 aaKnown RBP18.22■□□□□ 0.51
UPK3BP1-201ENST00000428678 TRAF2Q12933 501 aa18.22■□□□□ 0.51
UPK3BP1-201ENST00000428678 MAMLD1Q13495 774 aa18.22■□□□□ 0.51
UPK3BP1-201ENST00000428678 USP45Q70EL2 814 aa18.22■□□□□ 0.51
UPK3BP1-201ENST00000428678 KDELC2Q7Z4H8 507 aa18.22■□□□□ 0.51
UPK3BP1-201ENST00000428678 TRIM74Q86UV6 250 aa18.22■□□□□ 0.51
UPK3BP1-201ENST00000428678 CBARPQ8N350 705 aaPredicted RBP18.22■□□□□ 0.51
UPK3BP1-201ENST00000428678 ARFGAP1Q8N6T3 406 aa18.22■□□□□ 0.51
UPK3BP1-201ENST00000428678 SLC37A2Q8TED4 501 aa18.22■□□□□ 0.51
UPK3BP1-201ENST00000428678 FNIP1Q8TF40 1166 aa18.22■□□□□ 0.51
UPK3BP1-201ENST00000428678 SCARF2Q96GP6 870 aaPredicted RBP18.22■□□□□ 0.51
UPK3BP1-201ENST00000428678 NUDCD1Q96RS6 583 aa18.22■□□□□ 0.51
UPK3BP1-201ENST00000428678 EFHD1Q9BUP0 239 aa18.22■□□□□ 0.51
UPK3BP1-201ENST00000428678 PARVAQ9NVD7 372 aa18.22■□□□□ 0.51
UPK3BP1-201ENST00000428678 TAS2R14Q9NYV8 317 aa18.22■□□□□ 0.51
UPK3BP1-201ENST00000428678 CD84Q9UIB8 345 aa18.22■□□□□ 0.51
UPK3BP1-201ENST00000428678 PRRC2CQ9Y520 2896 aaKnown RBP18.21■□□□□ 0.51
UPK3BP1-201ENST00000428678 MYO9AB2RTY4 2548 aa18.21■□□□□ 0.51
UPK3BP1-201ENST00000428678 A0A0U1RQS6 177 aa18.21■□□□□ 0.51
UPK3BP1-201ENST00000428678 TMCO5BA8MYB1 307 aa18.21■□□□□ 0.51
UPK3BP1-201ENST00000428678 RNF8O76064 485 aa18.21■□□□□ 0.51
UPK3BP1-201ENST00000428678 CTPS1P17812 591 aa18.21■□□□□ 0.51
UPK3BP1-201ENST00000428678 TNFAIP3P21580 790 aa18.21■□□□□ 0.51
UPK3BP1-201ENST00000428678 MAN1A1P33908 653 aa18.21■□□□□ 0.51
UPK3BP1-201ENST00000428678 FASLGP48023 281 aa18.21■□□□□ 0.51
UPK3BP1-201ENST00000428678 COPB1P53618 953 aaKnown RBP18.21■□□□□ 0.51
UPK3BP1-201ENST00000428678 MC2RQ01718 297 aa18.21■□□□□ 0.51
UPK3BP1-201ENST00000428678 DPTQ07507 201 aa18.21■□□□□ 0.51
UPK3BP1-201ENST00000428678 DEFB109BQ30KR1 87 aa18.21■□□□□ 0.51
UPK3BP1-201ENST00000428678 CEACAM20Q6UY09 585 aa18.21■□□□□ 0.51
UPK3BP1-201ENST00000428678 ADAMTSL4Q6UY14 1074 aa18.21■□□□□ 0.51
UPK3BP1-201ENST00000428678 RFLNAQ6ZTI6 216 aa18.21■□□□□ 0.51
UPK3BP1-201ENST00000428678 GALNT13Q8IUC8 556 aa18.21■□□□□ 0.51
UPK3BP1-201ENST00000428678 BBS5Q8N3I7 341 aa18.21■□□□□ 0.51
UPK3BP1-201ENST00000428678 PGBD5Q8N414 524 aa18.21■□□□□ 0.51
UPK3BP1-201ENST00000428678 LZTR1Q8N653 840 aa18.21■□□□□ 0.51
UPK3BP1-201ENST00000428678 APOBEC4Q8WW27 367 aaKnown RBP18.21■□□□□ 0.51
UPK3BP1-201ENST00000428678 AP2M1Q96CW1 435 aa18.21■□□□□ 0.51
UPK3BP1-201ENST00000428678 SCRN2Q96FV2 425 aa18.21■□□□□ 0.51
UPK3BP1-201ENST00000428678 CWC15Q9P013 229 aaKnown RBP18.21■□□□□ 0.51
UPK3BP1-201ENST00000428678 PDP2Q9P2J9 529 aa18.21■□□□□ 0.51
UPK3BP1-201ENST00000428678 UNC79Q9P2D8 2635 aa18.2■□□□□ 0.5
UPK3BP1-201ENST00000428678 NBPF19A0A087WUL8 3843 aa18.2■□□□□ 0.5
UPK3BP1-201ENST00000428678 SOD1P00441 154 aa18.2■□□□□ 0.5
UPK3BP1-201ENST00000428678 OAS2P29728 719 aaKnown RBP18.2■□□□□ 0.5
UPK3BP1-201ENST00000428678 MIPP30301 263 aa18.2■□□□□ 0.5
UPK3BP1-201ENST00000428678 MAXP61244 160 aa18.2■□□□□ 0.5
UPK3BP1-201ENST00000428678 DPYSQ14117 519 aa18.2■□□□□ 0.5
UPK3BP1-201ENST00000428678 LACTB2Q53H82 288 aaPredicted RBP18.2■□□□□ 0.5
UPK3BP1-201ENST00000428678 PYCR3Q53H96 274 aa18.2■□□□□ 0.5
UPK3BP1-201ENST00000428678 ARMC12Q5T9G4 340 aa18.2■□□□□ 0.5
UPK3BP1-201ENST00000428678 CYP4V2Q6ZWL3 525 aaPredicted RBP18.2■□□□□ 0.5
UPK3BP1-201ENST00000428678 TIPARPQ7Z3E1 657 aaKnown RBP18.2■□□□□ 0.5
UPK3BP1-201ENST00000428678 TECPR1Q7Z6L1 1165 aa18.2■□□□□ 0.5
UPK3BP1-201ENST00000428678 SFRP1Q8N474 314 aa18.2■□□□□ 0.5
UPK3BP1-201ENST00000428678 STARD8Q92502 1023 aa18.2■□□□□ 0.5
UPK3BP1-201ENST00000428678 NCSTNQ92542 709 aa18.2■□□□□ 0.5
UPK3BP1-201ENST00000428678 ABHD17AQ96GS6 310 aa18.2■□□□□ 0.5
UPK3BP1-201ENST00000428678 MCCC1Q96RQ3 725 aaPredicted RBP18.2■□□□□ 0.5
UPK3BP1-201ENST00000428678 MGME1Q9BQP7 344 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms