RNA–Protein interactions for RNA: ENST00000427383.6

CHEK1-202, Transcript of checkpoint kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CHEK1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-202ENST00000427383 TTC7BQ86TV6 843 aa17.08■□□□□ 0.32
CHEK1-202ENST00000427383 PPP1R16AQ96I34 528 aa17.08■□□□□ 0.32
CHEK1-202ENST00000427383 SNX15Q9NRS6 342 aa17.08■□□□□ 0.32
CHEK1-202ENST00000427383 INTS10Q9NVR2 710 aaKnown RBP17.08■□□□□ 0.32
CHEK1-202ENST00000427383 AGAP14A8MT82 685 aa17.07■□□□□ 0.32
CHEK1-202ENST00000427383 AREL1O15033 823 aa17.07■□□□□ 0.32
CHEK1-202ENST00000427383 GPR39O43194 453 aa17.07■□□□□ 0.32
CHEK1-202ENST00000427383 PRAMEF1O95521 474 aa17.07■□□□□ 0.32
CHEK1-202ENST00000427383 CHN1P15882 459 aa17.07■□□□□ 0.32
CHEK1-202ENST00000427383 SPAM1P38567 509 aa17.07■□□□□ 0.32
CHEK1-202ENST00000427383 WASP42768 502 aa17.07■□□□□ 0.32
CHEK1-202ENST00000427383 CDKN1CP49918 316 aaPredicted RBP17.07■□□□□ 0.32
CHEK1-202ENST00000427383 NEK3P51956 506 aa17.07■□□□□ 0.32
CHEK1-202ENST00000427383 PTPN5P54829 565 aa17.07■□□□□ 0.32
CHEK1-202ENST00000427383 GRSF1Q12849 480 aaKnown RBP eCLIP17.07■□□□□ 0.32
CHEK1-202ENST00000427383 ZKSCAN8Q15776 578 aaPredicted RBP17.07■□□□□ 0.32
CHEK1-202ENST00000427383 FASTKD1Q53R41 847 aaKnown RBP17.07■□□□□ 0.32
CHEK1-202ENST00000427383 CMC1Q7Z7K0 106 aa17.07■□□□□ 0.32
CHEK1-202ENST00000427383 MMAAQ8IVH4 418 aaKnown RBP17.07■□□□□ 0.32
CHEK1-202ENST00000427383 OTUD6BQ8N6M0 293 aa17.07■□□□□ 0.32
CHEK1-202ENST00000427383 GPR26Q8NDV2 337 aa17.07■□□□□ 0.32
CHEK1-202ENST00000427383 DENND1AQ8TEH3 1009 aa17.07■□□□□ 0.32
CHEK1-202ENST00000427383 PBXIP1Q96AQ6 731 aa17.07■□□□□ 0.32
CHEK1-202ENST00000427383 PLEKHG4BQ96PX9 1271 aa17.07■□□□□ 0.32
CHEK1-202ENST00000427383 TCF12Q99081 682 aa17.07■□□□□ 0.32
CHEK1-202ENST00000427383 HDAC8Q9BY41 377 aa17.07■□□□□ 0.32
CHEK1-202ENST00000427383 NFKBIL1Q9UBC1 381 aaPredicted RBP17.07■□□□□ 0.32
CHEK1-202ENST00000427383 APPL1Q9UKG1 709 aa17.07■□□□□ 0.32
CHEK1-202ENST00000427383 DUSP12Q9UNI6 340 aa17.07■□□□□ 0.32
CHEK1-202ENST00000427383 TRBV5-4A0A0C4DH59 114 aa17.07■□□□□ 0.32
CHEK1-202ENST00000427383 FAM95CA0A1B0GW59 222 aa17.07■□□□□ 0.32
CHEK1-202ENST00000427383 C1QTNF3-AMACRE9PGA6 284 aa17.07■□□□□ 0.32
CHEK1-202ENST00000427383 SRP72O76094 671 aaKnown RBP17.07■□□□□ 0.32
CHEK1-202ENST00000427383 C7P10643 843 aa17.07■□□□□ 0.32
CHEK1-202ENST00000427383 ADRB3P13945 408 aa17.07■□□□□ 0.32
CHEK1-202ENST00000427383 RPA3P35244 121 aaPredicted RBP17.07■□□□□ 0.32
CHEK1-202ENST00000427383 DRD3P35462 400 aa17.07■□□□□ 0.32
CHEK1-202ENST00000427383 POLD2P49005 469 aa17.07■□□□□ 0.32
CHEK1-202ENST00000427383 SPINT3P49223 89 aa17.07■□□□□ 0.32
CHEK1-202ENST00000427383 SUOXP51687 545 aa17.07■□□□□ 0.32
CHEK1-202ENST00000427383 CLCN5P51795 746 aa17.07■□□□□ 0.32
CHEK1-202ENST00000427383 COPAP53621 1224 aa17.07■□□□□ 0.32
CHEK1-202ENST00000427383 CACNG1Q06432 222 aa17.07■□□□□ 0.32
CHEK1-202ENST00000427383 ILF2Q12905 390 aaKnown RBP17.07■□□□□ 0.32
CHEK1-202ENST00000427383 NFATC2Q13469 925 aa17.07■□□□□ 0.32
CHEK1-202ENST00000427383 PDE1CQ14123 709 aaPredicted RBP17.07■□□□□ 0.32
CHEK1-202ENST00000427383 RBM20Q5T481 1227 aaKnown RBP17.07■□□□□ 0.32
CHEK1-202ENST00000427383 FAM151BQ6UXP7 276 aa17.07■□□□□ 0.32
CHEK1-202ENST00000427383 CDHR3Q6ZTQ4 885 aa17.07■□□□□ 0.32
CHEK1-202ENST00000427383 ATXN2LQ8WWM7 1075 aaKnown RBP17.07■□□□□ 0.32
CHEK1-202ENST00000427383 LPGAT1Q92604 370 aa17.07■□□□□ 0.32
CHEK1-202ENST00000427383 CAB39LQ9H9S4 337 aa17.07■□□□□ 0.32
CHEK1-202ENST00000427383 PRDM6Q9NQX0 595 aa17.07■□□□□ 0.32
CHEK1-202ENST00000427383 PCMTD2Q9NV79 361 aa17.07■□□□□ 0.32
CHEK1-202ENST00000427383 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.07■□□□□ 0.32
CHEK1-202ENST00000427383 CORO1CQ9ULV4 474 aaPredicted RBP17.07■□□□□ 0.32
CHEK1-202ENST00000427383 ITM2BQ9Y287 266 aa17.07■□□□□ 0.32
CHEK1-202ENST00000427383 GLYATL1P3A0A0U1RQE8 302 aa17.06■□□□□ 0.32
CHEK1-202ENST00000427383 A0A1W2PQF6 199 aa17.06■□□□□ 0.32
CHEK1-202ENST00000427383 H0Y858 1186 aa17.06■□□□□ 0.32
CHEK1-202ENST00000427383 MDH1P40925 334 aaKnown RBP17.06■□□□□ 0.32
CHEK1-202ENST00000427383 PSMD8P48556 350 aa17.06■□□□□ 0.32
CHEK1-202ENST00000427383 TTPAP49638 278 aa17.06■□□□□ 0.32
CHEK1-202ENST00000427383 DCDC1P59894 354 aa17.06■□□□□ 0.32
CHEK1-202ENST00000427383 MRPS21P82921 87 aaKnown RBP17.06■□□□□ 0.32
CHEK1-202ENST00000427383 SATB1Q01826 763 aa17.06■□□□□ 0.32
CHEK1-202ENST00000427383 GUCY1A3Q02108 690 aa17.06■□□□□ 0.32
CHEK1-202ENST00000427383 PPARDQ03181 441 aa17.06■□□□□ 0.32
CHEK1-202ENST00000427383 ARHGEF7Q14155 803 aa17.06■□□□□ 0.32
CHEK1-202ENST00000427383 CST6Q15828 149 aa17.06■□□□□ 0.32
CHEK1-202ENST00000427383 SLC44A4Q53GD3 710 aa17.06■□□□□ 0.32
CHEK1-202ENST00000427383 AARS2Q5JTZ9 985 aaKnown RBP17.06■□□□□ 0.32
CHEK1-202ENST00000427383 PIP5KL1Q5T9C9 394 aa17.06■□□□□ 0.32
CHEK1-202ENST00000427383 KIAA1211LQ6NV74 962 aa17.06■□□□□ 0.32
CHEK1-202ENST00000427383 ERAP2Q6P179 960 aa17.06■□□□□ 0.32
CHEK1-202ENST00000427383 ZNF549Q6P9A3 640 aa17.06■□□□□ 0.32
CHEK1-202ENST00000427383 RFLNAQ6ZTI6 216 aa17.06■□□□□ 0.32
CHEK1-202ENST00000427383 ERN2Q76MJ5 926 aaKnown RBP17.06■□□□□ 0.32
CHEK1-202ENST00000427383 SDCCAG8Q86SQ7 713 aaPredicted RBP17.06■□□□□ 0.32
CHEK1-202ENST00000427383 OMDQ99983 421 aa17.06■□□□□ 0.32
CHEK1-202ENST00000427383 KCNK9Q9NPC2 374 aa17.06■□□□□ 0.32
CHEK1-202ENST00000427383 FNDC3AQ9Y2H6 1198 aaKnown RBP17.06■□□□□ 0.32
CHEK1-202ENST00000427383 PSMD11O00231 422 aa17.05■□□□□ 0.32
CHEK1-202ENST00000427383 SHOX2O60902 331 aaPredicted RBP17.05■□□□□ 0.32
CHEK1-202ENST00000427383 TOP3BO95985 862 aaKnown RBP17.05■□□□□ 0.32
CHEK1-202ENST00000427383 GM2AP17900 193 aa17.05■□□□□ 0.32
CHEK1-202ENST00000427383 XPAP23025 273 aaPredicted RBP17.05■□□□□ 0.32
CHEK1-202ENST00000427383 TYK2P29597 1187 aa17.05■□□□□ 0.32
CHEK1-202ENST00000427383 CA5AP35218 305 aa17.05■□□□□ 0.32
CHEK1-202ENST00000427383 P2RY2P41231 377 aa17.05■□□□□ 0.32
CHEK1-202ENST00000427383 ADARP55265 1226 aaKnown RBP17.05■□□□□ 0.32
CHEK1-202ENST00000427383 ZP2Q05996 745 aa17.05■□□□□ 0.32
CHEK1-202ENST00000427383 ZRANB3Q5FWF4 1079 aa17.05■□□□□ 0.32
CHEK1-202ENST00000427383 RNF187Q5TA31 235 aaPredicted RBP17.05■□□□□ 0.32
CHEK1-202ENST00000427383 FAM46CQ5VWP2 391 aa17.05■□□□□ 0.32
CHEK1-202ENST00000427383 ZDHHC20Q5W0Z9 365 aa17.05■□□□□ 0.32
CHEK1-202ENST00000427383 LIPIQ6XZB0 460 aa17.05■□□□□ 0.32
CHEK1-202ENST00000427383 TRMT11Q7Z4G4 463 aaKnown RBP17.05■□□□□ 0.32
CHEK1-202ENST00000427383 HSD11B1LQ7Z5J1 315 aa17.05■□□□□ 0.32
CHEK1-202ENST00000427383 SNX20Q7Z614 316 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms