RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 KRT24Q2M2I5 525 aa2.47□□□□□ -2.01
PTPRC-208ENST00000427110 EIF2S3LQ2VIR3 472 aaKnown RBP2.47□□□□□ -2.01
PTPRC-208ENST00000427110 EFHC1Q5JVL4 640 aa2.47□□□□□ -2.01
PTPRC-208ENST00000427110 ACSM2BQ68CK6 577 aa2.47□□□□□ -2.01
PTPRC-208ENST00000427110 SIGIRRQ6IA17 410 aa2.47□□□□□ -2.01
PTPRC-208ENST00000427110 ANKRD54Q6NXT1 300 aa2.47□□□□□ -2.01
PTPRC-208ENST00000427110 PQLC2Q6ZP29 291 aa2.47□□□□□ -2.01
PTPRC-208ENST00000427110 MTSS1LQ765P7 747 aa2.47□□□□□ -2.01
PTPRC-208ENST00000427110 DPPA4Q7L190 304 aa2.47□□□□□ -2.01
PTPRC-208ENST00000427110 TAOK1Q7L7X3 1001 aa2.47□□□□□ -2.01
PTPRC-208ENST00000427110 WDR63Q8IWG1 891 aa2.47□□□□□ -2.01
PTPRC-208ENST00000427110 ADGRF2Q8IZF7 708 aa2.47□□□□□ -2.01
PTPRC-208ENST00000427110 TMTC2Q8N394 836 aa2.47□□□□□ -2.01
PTPRC-208ENST00000427110 SPATA6LQ8N4H0 392 aa2.47□□□□□ -2.01
PTPRC-208ENST00000427110 PRR26Q8N8Z3 221 aa2.47□□□□□ -2.01
PTPRC-208ENST00000427110 SMRP1Q8NCR6 262 aa2.47□□□□□ -2.01
PTPRC-208ENST00000427110 ADAMTS14Q8WXS8 1223 aa2.47□□□□□ -2.01
PTPRC-208ENST00000427110 IGSF8Q969P0 613 aa2.47□□□□□ -2.01
PTPRC-208ENST00000427110 JAKMIP2Q96AA8 810 aa2.47□□□□□ -2.01
PTPRC-208ENST00000427110 MOAP1Q96BY2 351 aa2.47□□□□□ -2.01
PTPRC-208ENST00000427110 MTBPQ96DY7 904 aa2.47□□□□□ -2.01
PTPRC-208ENST00000427110 LMLNQ96KR4 655 aa2.47□□□□□ -2.01
PTPRC-208ENST00000427110 LRFN5Q96NI6 719 aa2.47□□□□□ -2.01
PTPRC-208ENST00000427110 NTPCRQ9BSD7 190 aaKnown RBP2.47□□□□□ -2.01
PTPRC-208ENST00000427110 TMEM204Q9BSN7 226 aa2.47□□□□□ -2.01
PTPRC-208ENST00000427110 HINT3Q9NQE9 182 aaKnown RBP2.47□□□□□ -2.01
PTPRC-208ENST00000427110 CNGB3Q9NQW8 809 aa2.47□□□□□ -2.01
PTPRC-208ENST00000427110 WWOXQ9NZC7 414 aa2.47□□□□□ -2.01
PTPRC-208ENST00000427110 CWC15Q9P013 229 aaKnown RBP2.47□□□□□ -2.01
PTPRC-208ENST00000427110 PCDHGB4Q9UN71 923 aa2.47□□□□□ -2.01
PTPRC-208ENST00000427110 PCDHA7Q9UN72 937 aa2.47□□□□□ -2.01
PTPRC-208ENST00000427110 TMEM5Q9Y2B1 443 aa2.47□□□□□ -2.01
PTPRC-208ENST00000427110 SNX9Q9Y5X1 595 aa2.47□□□□□ -2.01
PTPRC-208ENST00000427110 A0A1W2PQ09 198 aa2.46□□□□□ -2.02
PTPRC-208ENST00000427110 A8MZ25 164 aa2.46□□□□□ -2.02
PTPRC-208ENST00000427110 B4DLN1 442 aa2.46□□□□□ -2.02
PTPRC-208ENST00000427110 ATP2A1O14983 1001 aa2.46□□□□□ -2.02
PTPRC-208ENST00000427110 HSPA12AO43301 675 aa2.46□□□□□ -2.02
PTPRC-208ENST00000427110 FIBPO43427 364 aa2.46□□□□□ -2.02
PTPRC-208ENST00000427110 HCRTR2O43614 444 aa2.46□□□□□ -2.02
PTPRC-208ENST00000427110 AHCYL1O43865 530 aa2.46□□□□□ -2.02
PTPRC-208ENST00000427110 JRKO75564 520 aa2.46□□□□□ -2.02
PTPRC-208ENST00000427110 GJB3O75712 270 aa2.46□□□□□ -2.02
PTPRC-208ENST00000427110 TPPPO94811 219 aa2.46□□□□□ -2.02
PTPRC-208ENST00000427110 PAPSS2O95340 614 aaPredicted RBP2.46□□□□□ -2.02
PTPRC-208ENST00000427110 STARD3NLO95772 234 aa2.46□□□□□ -2.02
PTPRC-208ENST00000427110 SRPRAP08240 638 aaKnown RBP2.46□□□□□ -2.02
PTPRC-208ENST00000427110 HOXC6P09630 235 aa2.46□□□□□ -2.02
PTPRC-208ENST00000427110 CSH1P0DML2 217 aa2.46□□□□□ -2.02
PTPRC-208ENST00000427110 CSH2P0DML3 217 aa2.46□□□□□ -2.02
PTPRC-208ENST00000427110 PORP16435 677 aaPredicted RBP2.46□□□□□ -2.02
PTPRC-208ENST00000427110 DDX5P17844 614 aaKnown RBP2.46□□□□□ -2.02
PTPRC-208ENST00000427110 ANXA7P20073 488 aaKnown RBP2.46□□□□□ -2.02
PTPRC-208ENST00000427110 SAT1P21673 171 aa2.46□□□□□ -2.02
PTPRC-208ENST00000427110 TM4SF1P30408 202 aa2.46□□□□□ -2.02
PTPRC-208ENST00000427110 GARSP41250 739 aaKnown RBP2.46□□□□□ -2.02
PTPRC-208ENST00000427110 PRCPP42785 496 aa2.46□□□□□ -2.02
PTPRC-208ENST00000427110 CAMPP49913 170 aa2.46□□□□□ -2.02
PTPRC-208ENST00000427110 MRPL12P52815 198 aaKnown RBP2.46□□□□□ -2.02
PTPRC-208ENST00000427110 ABATP80404 500 aa2.46□□□□□ -2.02
PTPRC-208ENST00000427110 ZBED6P86452 979 aa2.46□□□□□ -2.02
PTPRC-208ENST00000427110 ADIPOQQ15848 244 aa2.46□□□□□ -2.02
PTPRC-208ENST00000427110 CTF1Q16619 201 aa2.46□□□□□ -2.02
PTPRC-208ENST00000427110 ASTE1Q2TB18 679 aaPredicted RBP2.46□□□□□ -2.02
PTPRC-208ENST00000427110 CDONQ4KMG0 1287 aa2.46□□□□□ -2.02
PTPRC-208ENST00000427110 XKR9Q5GH70 373 aa2.46□□□□□ -2.02
PTPRC-208ENST00000427110 PPP6R3Q5H9R7 873 aaPredicted RBP2.46□□□□□ -2.02
PTPRC-208ENST00000427110 CFAP58Q5T655 872 aa2.46□□□□□ -2.02
PTPRC-208ENST00000427110 ZNF324BQ6AW86 544 aaPredicted RBP2.46□□□□□ -2.02
PTPRC-208ENST00000427110 KIAA0930Q6ICG6 404 aaPredicted RBP2.46□□□□□ -2.02
PTPRC-208ENST00000427110 KCTD18Q6PI47 426 aaPredicted RBP2.46□□□□□ -2.02
PTPRC-208ENST00000427110 SEPT14Q6ZU15 432 aa2.46□□□□□ -2.02
PTPRC-208ENST00000427110 CACNA2D4Q7Z3S7 1137 aa2.46□□□□□ -2.02
PTPRC-208ENST00000427110 ARHGAP30Q7Z6I6 1101 aaPredicted RBP2.46□□□□□ -2.02
PTPRC-208ENST00000427110 SPATA2LQ8IUW3 424 aaPredicted RBP2.46□□□□□ -2.02
PTPRC-208ENST00000427110 OR8K5Q8NH50 307 aa2.46□□□□□ -2.02
PTPRC-208ENST00000427110 NUDCD2Q8WVJ2 157 aa2.46□□□□□ -2.02
PTPRC-208ENST00000427110 MED30Q96HR3 178 aa2.46□□□□□ -2.02
PTPRC-208ENST00000427110 NUDCD1Q96RS6 583 aa2.46□□□□□ -2.02
PTPRC-208ENST00000427110 ACOX2Q99424 681 aa2.46□□□□□ -2.02
PTPRC-208ENST00000427110 HAUS8Q9BT25 410 aa2.46□□□□□ -2.02
PTPRC-208ENST00000427110 SEZ6LQ9BYH1 1024 aa2.46□□□□□ -2.02
PTPRC-208ENST00000427110 PLK3Q9H4B4 646 aa2.46□□□□□ -2.02
PTPRC-208ENST00000427110 PDZD7Q9H5P4 517 aa2.46□□□□□ -2.02
PTPRC-208ENST00000427110 ESRP2Q9H6T0 727 aaKnown RBP2.46□□□□□ -2.02
PTPRC-208ENST00000427110 C17orf75Q9HAS0 396 aa2.46□□□□□ -2.02
PTPRC-208ENST00000427110 ACSS1Q9NUB1 689 aaPredicted RBP2.46□□□□□ -2.02
PTPRC-208ENST00000427110 OGFRQ9NZT2 677 aa2.46□□□□□ -2.02
PTPRC-208ENST00000427110 SLC9A2Q9UBY0 812 aa2.46□□□□□ -2.02
PTPRC-208ENST00000427110 FBXL17Q9UF56 701 aa2.46□□□□□ -2.02
PTPRC-208ENST00000427110 OR14J1Q9UGF5 321 aa2.46□□□□□ -2.02
PTPRC-208ENST00000427110 NENFQ9UMX5 172 aa2.46□□□□□ -2.02
PTPRC-208ENST00000427110 RUSC2Q8N2Y8 1516 aa2.46□□□□□ -2.02
PTPRC-208ENST00000427110 TCF20Q9UGU0 1960 aaKnown RBP2.45□□□□□ -2.02
PTPRC-208ENST00000427110 RSF1Q96T23 1441 aaPredicted RBP2.45□□□□□ -2.02
PTPRC-208ENST00000427110 IFITM10A6NMD0 228 aa2.45□□□□□ -2.02
PTPRC-208ENST00000427110 SOCS6O14544 535 aa2.45□□□□□ -2.02
PTPRC-208ENST00000427110 WNT9BO14905 357 aa2.45□□□□□ -2.02
PTPRC-208ENST00000427110 SCAMP1O15126 338 aa2.45□□□□□ -2.02
PTPRC-208ENST00000427110 NDUFS7O75251 213 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms