RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 FRMD8Q9BZ67 464 aaPredicted RBP12.22□□□□□ -0.45
HLA-DQB3-203ENST00000425319 LRRC4CQ9HCJ2 640 aa12.22□□□□□ -0.45
HLA-DQB3-203ENST00000425319 CHMP5Q9NZZ3 219 aa12.22□□□□□ -0.45
HLA-DQB3-203ENST00000425319 CNOT8Q9UFF9 292 aaKnown RBP12.22□□□□□ -0.45
HLA-DQB3-203ENST00000425319 SLC17A4Q9Y2C5 497 aa12.22□□□□□ -0.45
HLA-DQB3-203ENST00000425319 CELSR3Q9NYQ7 3312 aa12.21□□□□□ -0.45
HLA-DQB3-203ENST00000425319 TRBV23OR9-2A0A075B6M9 112 aa12.21□□□□□ -0.45
HLA-DQB3-203ENST00000425319 MKRN2OSH3BPM6 223 aa12.21□□□□□ -0.45
HLA-DQB3-203ENST00000425319 HTRA2O43464 458 aaPredicted RBP12.21□□□□□ -0.45
HLA-DQB3-203ENST00000425319 CCNYL3P0C7X3 344 aa12.21□□□□□ -0.45
HLA-DQB3-203ENST00000425319 THRAP10827 490 aa12.21□□□□□ -0.45
HLA-DQB3-203ENST00000425319 MPSTP25325 297 aa12.21□□□□□ -0.45
HLA-DQB3-203ENST00000425319 ETV3P41162 512 aa12.21□□□□□ -0.45
HLA-DQB3-203ENST00000425319 RGRP47804 291 aa12.21□□□□□ -0.45
HLA-DQB3-203ENST00000425319 FASLGP48023 281 aa12.21□□□□□ -0.45
HLA-DQB3-203ENST00000425319 HHEXQ03014 270 aa12.21□□□□□ -0.45
HLA-DQB3-203ENST00000425319 SLC10A7Q0GE19 358 aa12.21□□□□□ -0.45
HLA-DQB3-203ENST00000425319 KLRB1Q12918 225 aa12.21□□□□□ -0.45
HLA-DQB3-203ENST00000425319 MAMLD1Q13495 774 aa12.21□□□□□ -0.45
HLA-DQB3-203ENST00000425319 CNGA3Q16281 694 aa12.21□□□□□ -0.45
HLA-DQB3-203ENST00000425319 SKIDA1Q1XH10 827 aa12.21□□□□□ -0.45
HLA-DQB3-203ENST00000425319 CCDC122Q5T0U0 273 aa12.21□□□□□ -0.45
HLA-DQB3-203ENST00000425319 ANKS6Q68DC2 871 aa12.21□□□□□ -0.45
HLA-DQB3-203ENST00000425319 C16orf46Q6P387 395 aa12.21□□□□□ -0.45
HLA-DQB3-203ENST00000425319 Q6ZVL8 140 aa12.21□□□□□ -0.45
HLA-DQB3-203ENST00000425319 TMPRSS9Q7Z410 1059 aa12.21□□□□□ -0.45
HLA-DQB3-203ENST00000425319 RAVER1Q8IY67 606 aaKnown RBP12.21□□□□□ -0.45
HLA-DQB3-203ENST00000425319 ATPAF2Q8N5M1 289 aa12.21□□□□□ -0.45
HLA-DQB3-203ENST00000425319 CCHCR1Q8TD31 782 aa12.21□□□□□ -0.45
HLA-DQB3-203ENST00000425319 HTR3CQ8WXA8 447 aa12.21□□□□□ -0.45
HLA-DQB3-203ENST00000425319 SNRNP25Q9BV90 132 aaKnown RBP12.21□□□□□ -0.45
HLA-DQB3-203ENST00000425319 RMI1Q9H9A7 625 aa12.21□□□□□ -0.45
HLA-DQB3-203ENST00000425319 GPATCH2LQ9NWQ4 482 aa12.21□□□□□ -0.45
HLA-DQB3-203ENST00000425319 KCTD3Q9Y597 815 aa12.21□□□□□ -0.45
HLA-DQB3-203ENST00000425319 ASH1LQ9NR48 2969 aaKnown RBP12.21□□□□□ -0.46
HLA-DQB3-203ENST00000425319 SETXQ7Z333 2677 aaKnown RBP12.2□□□□□ -0.46
HLA-DQB3-203ENST00000425319 TMCO5BA8MYB1 307 aa12.2□□□□□ -0.46
HLA-DQB3-203ENST00000425319 PRKAR1AP10644 381 aa12.2□□□□□ -0.46
HLA-DQB3-203ENST00000425319 MMP13P45452 471 aa12.2□□□□□ -0.46
HLA-DQB3-203ENST00000425319 MAPK9P45984 424 aa12.2□□□□□ -0.46
HLA-DQB3-203ENST00000425319 KLK7P49862 253 aa12.2□□□□□ -0.46
HLA-DQB3-203ENST00000425319 EPHA4P54764 986 aa12.2□□□□□ -0.46
HLA-DQB3-203ENST00000425319 SRSF1Q07955 248 aaKnown RBP eCLIP12.2□□□□□ -0.46
HLA-DQB3-203ENST00000425319 DEFB109BQ30KR1 87 aa12.2□□□□□ -0.46
HLA-DQB3-203ENST00000425319 FILIP1LQ4L180 1135 aa12.2□□□□□ -0.46
HLA-DQB3-203ENST00000425319 CRTC2Q53ET0 693 aaPredicted RBP12.2□□□□□ -0.46
HLA-DQB3-203ENST00000425319 LACTB2Q53H82 288 aaPredicted RBP12.2□□□□□ -0.46
HLA-DQB3-203ENST00000425319 ADAMTSL4Q6UY14 1074 aa12.2□□□□□ -0.46
HLA-DQB3-203ENST00000425319 MARK2Q7KZI7 788 aaKnown RBP12.2□□□□□ -0.46
HLA-DQB3-203ENST00000425319 ZNF765Q7L2R6 523 aa12.2□□□□□ -0.46
HLA-DQB3-203ENST00000425319 CHST15Q7LFX5 561 aaPredicted RBP12.2□□□□□ -0.46
HLA-DQB3-203ENST00000425319 FAM26EQ8N5C1 309 aa12.2□□□□□ -0.46
HLA-DQB3-203ENST00000425319 FNIP1Q8TF40 1166 aa12.2□□□□□ -0.46
HLA-DQB3-203ENST00000425319 SEC14L1Q92503 715 aa12.2□□□□□ -0.46
HLA-DQB3-203ENST00000425319 HERPUD2Q9BSE4 406 aa12.2□□□□□ -0.46
HLA-DQB3-203ENST00000425319 SARS2Q9NP81 518 aaKnown RBP12.2□□□□□ -0.46
HLA-DQB3-203ENST00000425319 ZNF71Q9NQZ8 489 aaPredicted RBP12.2□□□□□ -0.46
HLA-DQB3-203ENST00000425319 ANO10Q9NW15 660 aa12.2□□□□□ -0.46
HLA-DQB3-203ENST00000425319 FANCLQ9NW38 375 aa12.2□□□□□ -0.46
HLA-DQB3-203ENST00000425319 OCIAD1Q9NX40 245 aa12.2□□□□□ -0.46
HLA-DQB3-203ENST00000425319 KCND3Q9UK17 655 aa12.2□□□□□ -0.46
HLA-DQB3-203ENST00000425319 PILRAQ9UKJ1 303 aa12.2□□□□□ -0.46
HLA-DQB3-203ENST00000425319 MYO6Q9UM54 1294 aa12.2□□□□□ -0.46
HLA-DQB3-203ENST00000425319 TMEM98Q9Y2Y6 226 aa12.2□□□□□ -0.46
HLA-DQB3-203ENST00000425319 KALRNO60229 2985 aa12.19□□□□□ -0.46
HLA-DQB3-203ENST00000425319 KIR2DS5A0A0G2JLQ3 304 aa12.19□□□□□ -0.46
HLA-DQB3-203ENST00000425319 A0A0G2JNG1 304 aa12.19□□□□□ -0.46
HLA-DQB3-203ENST00000425319 KIR2DS3K7RE56 304 aa12.19□□□□□ -0.46
HLA-DQB3-203ENST00000425319 NKX2-8O15522 239 aa12.19□□□□□ -0.46
HLA-DQB3-203ENST00000425319 VPS4BO75351 444 aa12.19□□□□□ -0.46
HLA-DQB3-203ENST00000425319 STK17BO94768 372 aa12.19□□□□□ -0.46
HLA-DQB3-203ENST00000425319 PGLSO95336 258 aa12.19□□□□□ -0.46
HLA-DQB3-203ENST00000425319 MT-ND3P03897 115 aa12.19□□□□□ -0.46
HLA-DQB3-203ENST00000425319 MYBL1P10243 752 aa12.19□□□□□ -0.46
HLA-DQB3-203ENST00000425319 GZMAP12544 262 aa12.19□□□□□ -0.46
HLA-DQB3-203ENST00000425319 AMD1P17707 334 aa12.19□□□□□ -0.46
HLA-DQB3-203ENST00000425319 WT1P19544 449 aaPredicted RBP12.19□□□□□ -0.46
HLA-DQB3-203ENST00000425319 MIPP30301 263 aa12.19□□□□□ -0.46
HLA-DQB3-203ENST00000425319 POLD2P49005 469 aa12.19□□□□□ -0.46
HLA-DQB3-203ENST00000425319 FOXK1P85037 733 aa12.19□□□□□ -0.46
HLA-DQB3-203ENST00000425319 FOXM1Q08050 763 aa12.19□□□□□ -0.46
HLA-DQB3-203ENST00000425319 CDC20Q12834 499 aa12.19□□□□□ -0.46
HLA-DQB3-203ENST00000425319 KIR2DS5Q14953 304 aa12.19□□□□□ -0.46
HLA-DQB3-203ENST00000425319 PYCR3Q53H96 274 aa12.19□□□□□ -0.46
HLA-DQB3-203ENST00000425319 PLEKHA7Q6IQ23 1121 aa12.19□□□□□ -0.46
HLA-DQB3-203ENST00000425319 TIGD7Q6NT04 549 aaPredicted RBP12.19□□□□□ -0.46
HLA-DQB3-203ENST00000425319 NYAP1Q6ZVC0 841 aa12.19□□□□□ -0.46
HLA-DQB3-203ENST00000425319 HSD11B1LQ7Z5J1 315 aa12.19□□□□□ -0.46
HLA-DQB3-203ENST00000425319 PHYKPLQ8IUZ5 450 aa12.19□□□□□ -0.46
HLA-DQB3-203ENST00000425319 SFTPA2Q8IWL1 248 aa12.19□□□□□ -0.46
HLA-DQB3-203ENST00000425319 TRIM48Q8IWZ4 208 aa12.19□□□□□ -0.46
HLA-DQB3-203ENST00000425319 EFCAB3Q8N7B9 438 aa12.19□□□□□ -0.46
HLA-DQB3-203ENST00000425319 RTP4Q96DX8 246 aa12.19□□□□□ -0.46
HLA-DQB3-203ENST00000425319 ABHD17AQ96GS6 310 aa12.19□□□□□ -0.46
HLA-DQB3-203ENST00000425319 KCTD15Q96SI1 283 aaPredicted RBP12.19□□□□□ -0.46
HLA-DQB3-203ENST00000425319 POLR1EQ9GZS1 481 aaKnown RBP12.19□□□□□ -0.46
HLA-DQB3-203ENST00000425319 EPN3Q9H201 632 aa12.19□□□□□ -0.46
HLA-DQB3-203ENST00000425319 ABCG8Q9H221 673 aa12.19□□□□□ -0.46
HLA-DQB3-203ENST00000425319 NOD2Q9HC29 1040 aa12.19□□□□□ -0.46
HLA-DQB3-203ENST00000425319 CWC15Q9P013 229 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms